prot_L-elsbetiae_contig5935.14418.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5935.14418.1
Unique Nameprot_L-elsbetiae_contig5935.14418.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length126
Homology
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BLAST of mRNA_L-elsbetiae_contig5935.14418.1 vs. uniprot
Match: D8LP55_ECTSI (EsV-1-16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP55_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 1.600e-34
Identity = 64/112 (57.14%), Postives = 75/112 (66.96%), Query Frame = 0 
Query:    1 MKRVFLPVSSGVGPKTRGLRGPCAQHQTRGAKHLTRPQKWEILERQRWRCKAYGGRIQLYSYANCDADHVIGVRRGGKTVPVNMQPLCVRCRRNKSARELRSVPGRVDLALE 112
            MK +FLPV SG G K     GP    +    KHLTRPQKW ILERQR RC + G RI++Y YA+CDADH+IGV RGGKTVP NM  LC+ C R K+  E   +P  VD+ALE
Sbjct:    1 MKHLFLPVFSGTGSKPVAYIGPSLNLRPVARKHLTRPQKWAILERQRSRCNSCGDRIRIYPYADCDADHIIGVCRGGKTVPENMNLLCLPCHRRKTCLEAGGLPRTVDVALE 112
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BLAST of mRNA_L-elsbetiae_contig5935.14418.1 vs. uniprot
Match: Q8QNP5_ESV1K (EsV-1-16 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNP5_ESV1K)

HSP 1 Score: 121 bits (304), Expect = 2.090e-32
Identity = 61/112 (54.46%), Postives = 72/112 (64.29%), Query Frame = 0 
Query:    1 MKRVFLPVSSGVGPKTRGLRGPCAQHQTRGAKHLTRPQKWEILERQRWRCKAYGGRIQLYSYANCDADHVIGVRRGGKTVPVNMQPLCVRCRRNKSARELRSVPGRVDLALE 112
            M  +FLPV SG   K     GP    +    KHLTRPQKW ILERQR RC +YG RI +Y YANCDADH+I V RGGKT+P NM  LC+ C R K+  E   +P  V++ALE
Sbjct:    1 MTHLFLPVFSGTASKPVAYIGPSHNLRPVARKHLTRPQKWAILERQRSRCNSYGDRIHIYPYANCDADHIISVCRGGKTLPENMNLLCLPCHRRKTCLEAGGLPRTVNVALE 112
[Close]
BLAST of mRNA_L-elsbetiae_contig5935.14418.1 vs. uniprot
Match: D7G322_ECTSI (EsV-1-16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G322_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.310e-26
Identity = 60/124 (48.39%), Postives = 69/124 (55.65%), Query Frame = 0 
Query:    1 MKRVFLPVSSGVGPKTRGLRGPCAQHQTRGAKHLTRPQKWEILERQRWRCKAYGGRIQLYSYANCDADHVIGVRRGGKTVPVNMQPLCVRCRRNKSARELRSVPGRVDLALEERIVTCTFSRGG 124
            M+  FLPV  GVG       GP    + R  KHLTR QK  +L+ QR RC + G  I L  YANCDADHVIGV RGG+TV  N Q LCVRC R K+  E    P  V++ALE          GG
Sbjct:    1 MRCTFLPVFGGVGQAPVAYVGPSHNLRPRARKHLTRSQKQAVLQTQRSRCNSCGDLIHLQPYANCDADHVIGVCRGGETVEENTQMLCVRCHRQKTCLEAGGSPRTVEVALEPGDSNVYIFTGG 124
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5935.14418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LP55_ECTSI1.600e-3457.14EsV-1-16 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
Q8QNP5_ESV1K2.090e-3254.46EsV-1-16 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
D7G322_ECTSI1.310e-2648.39EsV-1-16 n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003615HNH nucleaseSMARTSM00507HNH_5coord: 37..93
e-value: 0.0079
score: 25.4
NoneNo IPR availableGENE3D3.30.40.60coord: 19..116
e-value: 8.2E-10
score: 40.3
IPR002711HNH endonucleasePFAMPF01844HNHcoord: 65..98
e-value: 1.6E-4
score: 21.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5935contigL-elsbetiae_contig5935:7035..7412 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5935.14418.1mRNA_L-elsbetiae_contig5935.14418.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5935 7035..7596 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5935.14418.1 ID=prot_L-elsbetiae_contig5935.14418.1|Name=mRNA_L-elsbetiae_contig5935.14418.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=126bp
MKRVFLPVSSGVGPKTRGLRGPCAQHQTRGAKHLTRPQKWEILERQRWRC
KAYGGRIQLYSYANCDADHVIGVRRGGKTVPVNMQPLCVRCRRNKSAREL
RSVPGRVDLALEERIVTCTFSRGGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003615HNH_nuc
IPR002711HNH