mRNA_L-elsbetiae_contig5935.14417.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5935.14417.1 vs. uniprot
Match: D7G449_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G449_ECTSI) HSP 1 Score: 226 bits (577), Expect = 7.850e-74 Identity = 122/127 (96.06%), Postives = 124/127 (97.64%), Query Frame = 1 Query: 1 MPSTLSKLYHAAARGSVERTVALLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNAGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAG 381 MPSTLSKLY AAA GSVERTVA+LSQGSV+IDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADN GATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAG Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVNIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAG 127
BLAST of mRNA_L-elsbetiae_contig5935.14417.1 vs. uniprot
Match: D7G2C8_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C8_ECTSI) HSP 1 Score: 218 bits (555), Expect = 1.810e-70 Identity = 119/128 (92.97%), Postives = 121/128 (94.53%), Query Frame = 1 Query: 1 MPSTLSKLYHAAARGSVERTVALLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNAGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGA 384 MPSTLSKLY AAA GSVERTVA+LSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLR GARVSVADN GATALHLSIV KHLAVS+ALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIH A Sbjct: 1 MPSTLSKLYDAAASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRPGARVSVADNDGATALHLSIVIKHLAVSRALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHVDA 128
BLAST of mRNA_L-elsbetiae_contig5935.14417.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 229 bits (583), Expect = 4.050e-68 Identity = 123/128 (96.09%), Postives = 124/128 (96.88%), Query Frame = 1 Query: 1 MPSTLSKLYHAAARGSVERTVALLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNAGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGA 384 MPSTLSKLYHA A GSVERTVA+LSQGSVDIDGGYGDVGRTPLMAA TMGYLRVVRVLLRLGARVSVADN GATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGA Sbjct: 1 MPSTLSKLYHAPASGSVERTVAVLSQGSVDIDGGYGDVGRTPLMAAFTMGYLRVVRVLLRLGARVSVADNDGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGA 128
BLAST of mRNA_L-elsbetiae_contig5935.14417.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 152 bits (383), Expect = 3.190e-40 Identity = 88/116 (75.86%), Postives = 93/116 (80.17%), Query Frame = 1 Query: 37 ARGSVERTVALLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNAGATALHLSIVNKHLAVSKALVKAGAGVEARGVDGTPLHVAAAKGFHKGMVMLIHAGA 384 ARGSVERTVALLS+GSVDIDG YGD GRTPLM ASTMGYLRV RVLLRLGA VSVADN GATALHLS+ N+HLAVSKAL+KAGA VEAR VDG MV+LIHAGA Sbjct: 5 ARGSVERTVALLSRGSVDIDGSYGDAGRTPLMVASTMGYLRVERVLLRLGAGVSVADNDGATALHLSVFNQHLAVSKALIKAGAEVEARCVDG--------------MVVLIHAGA 106
BLAST of mRNA_L-elsbetiae_contig5935.14417.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 131 bits (329), Expect = 4.720e-34 Identity = 76/89 (85.39%), Postives = 77/89 (86.52%), Query Frame = 1 Query: 136 ASTMGYLRVVRVLLRLGARVSVADNAGATALHLSIVNKHLAVSKALVKAGAGVEAR-------GVDGTPLHVAAAKGFHKGMVMLIHAG 381 ASTMGYLRVVRVLLRLGARVS ADN GATALHLSIVNKHLAVSKALVKAGA +EAR GV TPLHVAAAKGFHKGMVMLIHAG Sbjct: 38 ASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAG 126
BLAST of mRNA_L-elsbetiae_contig5935.14417.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE) HSP 1 Score: 115 bits (288), Expect = 5.460e-28 Identity = 77/139 (55.40%), Postives = 96/139 (69.06%), Query Frame = 1 Query: 1 MPSTLSK-LYHAAARGSVERTVALLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNAGATALHLSIVNKHLAVSKALVKAGAGVEARG---------VDG-TPLHVAAAKGFHKGMVMLIHAGA 384 +PST S LY AA+ GSVERT+ LLS G +ID + G T LM A+ GYLR+VRVLLR GA VSV+ + G TALH +I ++LAV+KAL+KAGA VEA+ V G TPLH+AA +GF +GMV LI+AGA Sbjct: 13 VPSTTSDTLYCAASSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGA 151
BLAST of mRNA_L-elsbetiae_contig5935.14417.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 1.460e-13 Identity = 59/138 (42.75%), Postives = 70/138 (50.72%), Query Frame = 1 Query: 1 MPSTLSKLYHAAARGSVERTVALLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNAGATALHLSIVNKHLAVSKALVKAGAGVEARG---------VDG-TPLHVAAAKGFHKGMVMLIHAGA 384 MPST S LY+AA GSVERT+ LLS G +ID + G T LM A+ GYLR+VRVLLR GA VSV+ + G + V G TPLH+A +GF GMV LI AGA Sbjct: 1 MPSTTSTLYNAAWTGSVERTLDLLSDGFTEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEVVQGQTPLHLATGEGFCDGMVALIDAGA 138
BLAST of mRNA_L-elsbetiae_contig5935.14417.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 3.930e-8 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 1 Query: 13 LSKLYHAAARGSVERTVALLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNAGATALHLS 237 ++KL+ AA GS T A+LS GS+DIDGG G TPLM A + VV +LL GA VS ++ G TALHLS Sbjct: 15 INKLHEAARDGSTWLTAAILSTGSIDIDGGDSS-GGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLS 88
BLAST of mRNA_L-elsbetiae_contig5935.14417.1 vs. uniprot
Match: D7FXH6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH6_ECTSI) HSP 1 Score: 53.9 bits (128), Expect = 7.720e-6 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 22 LYHAAARGSVERTVALLSQGSVDIDGGYGDVGRTPLMAASTMGYLRVVRVLLRLGARVSVADNA 213 L+ AAARG V+RT+ALLS+ ++D D G TPL+AA+ G+ VVRVLL GA++S+A A Sbjct: 6 LHQAAARGMVQRTLALLSRPLANVDQRDND-GFTPLIAAAQEGHHNVVRVLLEHGAQISMASYA 68 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5935.14417.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5935.14417.1 >prot_L-elsbetiae_contig5935.14417.1 ID=prot_L-elsbetiae_contig5935.14417.1|Name=mRNA_L-elsbetiae_contig5935.14417.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=128bp MPSTLSKLYHAAARGSVERTVALLSQGSVDIDGGYGDVGRTPLMAASTMGback to top mRNA from alignment at L-elsbetiae_contig5935:10..393- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5935.14417.1 ID=mRNA_L-elsbetiae_contig5935.14417.1|Name=mRNA_L-elsbetiae_contig5935.14417.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=384bp|location=Sequence derived from alignment at L-elsbetiae_contig5935:10..393- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5935:10..393- >mRNA_L-elsbetiae_contig5935.14417.1 ID=mRNA_L-elsbetiae_contig5935.14417.1|Name=mRNA_L-elsbetiae_contig5935.14417.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=768bp|location=Sequence derived from alignment at L-elsbetiae_contig5935:10..393- (Laminarionema elsbetiae ELsaHSoW15)back to top |