mRNA_L-elsbetiae_contig5932.14413.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5932.14413.1 vs. uniprot
Match: A0A835ZJQ7_9STRA (Tubulin/FtsZ, GTPase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJQ7_9STRA) HSP 1 Score: 167 bits (422), Expect = 6.680e-41 Identity = 113/201 (56.22%), Postives = 127/201 (63.18%), Query Frame = 2 Query: 2 RSVMDSAGTALMGLGKAKGKNRASEAAKAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYENVDPEANIIFGALVDTEVKTGELQITVLATGFEDSNSRRGARPPAAARVAGNSAAGRPA-IRTQIPPPMDRRAASYVRDQLVYEEFKPVEAPPPSLGTKD---PFQKRERPARRG---GIVGFFRRLLFGR 583 RSVM +AGTALMG+G+ KGK RAS+AA AAI SPLLDFPV A+GIVFNIIGD DLTLAEINEAA VIY NVDP+ANIIFGALVD + GEL ITVLATGF GA S AGR A IRTQIP +D+ A S A P+ KD PF KRE P + G G+ F +R+L GR Sbjct: 329 RSVMSNAGTALMGVGRGKGKTRASDAAHAAISSPLLDFPVKQARGIVFNIIGDKDLTLAEINEAAQVIYRNVDPDANIIFGALVDPAL-AGELHITVLATGFHAEGLEGGAAXXXXXLA---SDAGRAAPIRTQIPAAIDQSAYSLAEQAAA--------AAAPAAARKDAGDPF-KREPPQKTGRLRGVFRFLKRVLLGR 516
BLAST of mRNA_L-elsbetiae_contig5932.14413.1 vs. uniprot
Match: D8LC51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC51_ECTSI) HSP 1 Score: 153 bits (387), Expect = 4.970e-36 Identity = 80/88 (90.91%), Postives = 85/88 (96.59%), Query Frame = 2 Query: 2 RSVMDSAGTALMGLGKAKGKNRASEAAKAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYENVDPEANIIFGALVDTEV 265 RSVM+ AGTALMGLGKAKGKNRA+EAA+AAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIY NVDP+ANIIFGALVD +V Sbjct: 387 RSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYANVDPDANIIFGALVDADV 474
BLAST of mRNA_L-elsbetiae_contig5932.14413.1 vs. uniprot
Match: Q9M7M5_9STRA (FtsZ (Fragment) n=1 Tax=Mallomonas splendens TaxID=52552 RepID=Q9M7M5_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.560e-34 Identity = 89/194 (45.88%), Postives = 116/194 (59.79%), Query Frame = 2 Query: 2 RSVMDSAGTALMGLGKAKGKNRASEAAKAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYENVDPEANIIFGALVDTEVKTGELQITVLATGFED---SNSRRGARPPAAARVAGNSAAGRPAIRTQIPPPMDRRAASYVRDQLVYEEFKPVEAPPPSLGTKDPFQKRERPARRGGIVGFFRRLL 574 R++M +AGTALMG+G KGKNRA +AA +AI SPLLDFP+T AKGIVFNI+G +D++L EIN AA VIYENVD +ANIIFGA+VD ++ +GE+ ITVLATGF SN G R++ G ++ PP +A + L ++ G KD E + GG GF +RL Sbjct: 179 RTIMGNAGTALMGIGHGKGKNRAKDAALSAISSPLLDFPITRAKGIVFNIVGGSDMSLQEINAAAEVIYENVDQDANIIFGAMVDDKMTSGEVSITVLATGFSTDYFSNDGSGLENLPPNRLSPPKTVGSAKSYSEYEPPSTPKAEERDSEYLSADDLTDESKERDQDGKKD-----EEKPKGGGFRGFIKRLF 367
BLAST of mRNA_L-elsbetiae_contig5932.14413.1 vs. uniprot
Match: A0A6U4ITN0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4ITN0_9STRA) HSP 1 Score: 140 bits (353), Expect = 4.700e-34 Identity = 77/120 (64.17%), Postives = 92/120 (76.67%), Query Frame = 2 Query: 2 RSVMDSAGTALMGLGKAKGKNRASEAAKAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYENVDPEANIIFGALVDTEVKTGELQITVLATGFEDSNSRRGARP---PAAA 352 RS+M +AGTALMG+G GK+RA++AA +AI SPLLDFP+ AKGIVFNI+G ADLTL+EIN AA VIYE VD ANIIFGAL+D +++GE+QITVLATGF A P PAAA Sbjct: 78 RSIMQNAGTALMGIGSGSGKSRAADAALSAIASPLLDFPIEAAKGIVFNIVGGADLTLSEINAAAEVIYEAVDQNANIIFGALIDDAIESGEVQITVLATGFAVPGQHDAAVPEKTPAAA 197
BLAST of mRNA_L-elsbetiae_contig5932.14413.1 vs. uniprot
Match: A0A7S3XXZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXZ4_HETAK) HSP 1 Score: 141 bits (356), Expect = 9.640e-33 Identity = 75/117 (64.10%), Postives = 94/117 (80.34%), Query Frame = 2 Query: 2 RSVMDSAGTALMGLGKAKGKNRASEAAKAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYENVDPEANIIFGALVDTEVKTGELQITVLATGFEDSNSRRGARPPAAA 352 +SVM++AG+ +MG+G KGK+RA +AA AAI SPLL+ P+T AKG+VFN++GD DLTLAEIN+AA VIY++VDPEANIIFGAL+D + G L ITVLATG E + ARPPAAA Sbjct: 304 KSVMENAGSGIMGIGTGKGKDRARDAAVAAISSPLLEAPLTKAKGVVFNVVGDKDLTLAEINQAAEVIYQSVDPEANIIFGALIDETLPLGTLTITVLATGVE-VGAAAPARPPAAA 419
BLAST of mRNA_L-elsbetiae_contig5932.14413.1 vs. uniprot
Match: A0A835ZC52_9STRA (Filamentous temperature sensitive Z n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC52_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.260e-32 Identity = 74/109 (67.89%), Postives = 86/109 (78.90%), Query Frame = 2 Query: 2 RSVMDSAGTALMGLGKAKGKNRASEAAKAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYENVDPEANIIFGALVDTEVKTGELQITVLATGFEDSNSRR 328 RSVM +AGTALMG+G+ +GKNRA +AA AAI SPLL+ P+ AKGIVFNI+G D+TL EIN AA VIYENVDP ANIIFGALVD ++ GEL ITVLATGF+ R Sbjct: 203 RSVMSNAGTALMGIGRGEGKNRAEDAAAAAISSPLLEAPIDKAKGIVFNIVGGRDMTLQEINAAAEVIYENVDPSANIIFGALVDDRMQ-GELSITVLATGFQTEEEVR 310
BLAST of mRNA_L-elsbetiae_contig5932.14413.1 vs. uniprot
Match: A0A6T5M1M2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5M1M2_HETAK) HSP 1 Score: 140 bits (352), Expect = 6.560e-32 Identity = 70/110 (63.64%), Postives = 87/110 (79.09%), Query Frame = 2 Query: 2 RSVMDSAGTALMGLGKAKGKNRASEAAKAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYENVDPEANIIFGALVDTEVKTGELQITVLATGFEDSNSRRG 331 RSVM AGTALMG+G+ +GK+RA +AA AAI SPLLDFP+ +A+GIVFN++G AD+TL EIN AA VIYENVDP ANIIFGAL+D ++ + ITVLA GF + + RG Sbjct: 272 RSVMAGAGTALMGIGRGEGKHRAEDAAAAAINSPLLDFPINEAQGIVFNVVGGADMTLQEINAAAEVIYENVDPSANIIFGALIDENMQDSGISITVLACGFNNPDEPRG 381
BLAST of mRNA_L-elsbetiae_contig5932.14413.1 vs. uniprot
Match: A0A7S2GNE8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GNE8_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.950e-31 Identity = 73/103 (70.87%), Postives = 85/103 (82.52%), Query Frame = 2 Query: 2 RSVMDSAGTALMGLGKAKGKNRASEAAKAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYENVDPEANIIFGALVDTEVKTGELQITVLATGFE 310 R+VM AGTALMG+G KGK RA +AA AAI SPLLDFP+ A+GIVFNI+G DLTL EIN AA VIYENVD +ANIIFGALVD+E+++ E+ ITVLATGFE Sbjct: 238 RAVMGDAGTALMGIGTGKGKTRAQDAAVAAISSPLLDFPINKAQGIVFNIVGGNDLTLQEINAAAEVIYENVDNDANIIFGALVDSEMES-EVSITVLATGFE 339
BLAST of mRNA_L-elsbetiae_contig5932.14413.1 vs. uniprot
Match: A0A6H5J7I1_9PHAE (Tubulin_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7I1_9PHAE) HSP 1 Score: 128 bits (322), Expect = 1.460e-30 Identity = 89/201 (44.28%), Postives = 106/201 (52.74%), Query Frame = 2 Query: 2 RSVMDSAGTALMGLGKAKGKNRASEAAKAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYENVDPEANIIFGALVDTEVKTGELQITVLATGFEDSNSRRGARPPAAARVAGNSAAGRPAIRTQIPPPMDRRAASYVRDQLVYEEFKPVEAPPP--SLGT----KDPFQKRERPARRG-GIVGFFRRLLFGR 583 RSVM+ AGTALMGLGKAKGKNRA+EAA+AAIESPLLDFPVTDAKGIVFNIIGDA LTLAE+ +P ASYV++QLVY + KP + PPP SLGT +DPFQ+ +RPA++ GI+GF RR+LFG+ Sbjct: 59 RSVMNKAGTALMGLGKAKGKNRAAEAARAAIESPLLDFPVTDAKGIVFNIIGDAGLTLAEV-----------------------------------------------------------------------VLP-------ASYVKEQLVYSQIKPEDTPPPLPSLGTAQGSRDPFQRDQRPAKKKRGILGFLRRILFGK 181
BLAST of mRNA_L-elsbetiae_contig5932.14413.1 vs. uniprot
Match: A0A7S2CTQ1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTQ1_9STRA) HSP 1 Score: 134 bits (338), Expect = 3.780e-30 Identity = 72/102 (70.59%), Postives = 83/102 (81.37%), Query Frame = 2 Query: 2 RSVMDSAGTALMGLGKAKGKNRASEAAKAAIESPLLDFPVTDAKGIVFNIIGDADLTLAEINEAASVIYENVDPEANIIFGALVDTEVKTGELQITVLATGF 307 R+VM +AGTALMG+G KGK RA +AA AAI SPLLDFP+ AKGIVFNI+G DLTL EIN AA VIYENVD +ANIIFGALVD ++ + E+ ITVLATGF Sbjct: 296 RTVMGNAGTALMGIGTGKGKTRAQDAAVAAISSPLLDFPIAKAKGIVFNIVGGDDLTLTEINAAAEVIYENVDQDANIIFGALVDKKMNS-EISITVLATGF 396 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5932.14413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5932.14413.1 >prot_L-elsbetiae_contig5932.14413.1 ID=prot_L-elsbetiae_contig5932.14413.1|Name=mRNA_L-elsbetiae_contig5932.14413.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=193bp MDSAGTALMGLGKAKGKNRASEAAKAAIESPLLDFPVTDAKGIVFNIIGDback to top mRNA from alignment at L-elsbetiae_contig5932:3675..11334- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5932.14413.1 ID=mRNA_L-elsbetiae_contig5932.14413.1|Name=mRNA_L-elsbetiae_contig5932.14413.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7660bp|location=Sequence derived from alignment at L-elsbetiae_contig5932:3675..11334- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5932:3675..11334- >mRNA_L-elsbetiae_contig5932.14413.1 ID=mRNA_L-elsbetiae_contig5932.14413.1|Name=mRNA_L-elsbetiae_contig5932.14413.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1158bp|location=Sequence derived from alignment at L-elsbetiae_contig5932:3675..11334- (Laminarionema elsbetiae ELsaHSoW15)back to top |