mRNA_L-elsbetiae_contig5924.14399.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5924.14399.1 vs. uniprot
Match: D8LQC6_ECTSI (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC6_ECTSI) HSP 1 Score: 210 bits (534), Expect = 4.780e-62 Identity = 249/349 (71.35%), Postives = 260/349 (74.50%), Query Frame = 1 Query: 1 MSEINVSKLKVSELKAELAQRSLDVKGNKADLAQRLQAALDEEEFGAIAVPTPTATNGDAAAAATAPELGNGGAAE---DPDVEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAARLAKRVERFGRIAPVTQTEAAEXXXXXXXXXXXPEPAAGGKAGTKRTLNPEEEAKKKKRMERFGIVDEKLEAAKRAEAEAAKILARQEKFGFVNPDAEKKAKS----AWIATELAEKKAKRIARFGEDTTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGG------KGXXXXXXXXXXXXXXXXXXXAPASATTMLSQGLKSSR 1008 MSEINVSKLKVSELK ELA RSLDVKGNKADLAQRLQAALDEEEFGAI++PTPT GDAA E GNG AAE +P VEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EA RLAKRVERFGRIAPVT++E AE PEPAAGGK GTKR+LNPEEEAK+KKRMERFGIVD+K EAAKR EAEA AW+A+E AEKKAKRIARFGEDTT XXXXXXXXXXXXXXXXXXXXXX G + XXXXXXXXXXXXXXXXXXX P SAT MLSQGLKSSR Sbjct: 1 MSEINVSKLKVSELKTELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTV--GDAAT-----EAGNGTAAEPPAEPAVEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------EAMRLAKRVERFGRIAPVTESEVAEKMAMRREKFGLPEPAAGGKQGTKRSLNPEEEAKRKKRMERFGIVDDKEEAAKRTEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXAWLASEQAEKKAKRIARFGEDTTAVAXXXXXXXXXXXXXXXXXXXXXXRSGRGSGGXXXXXRERXXXXXXXXXXXXXXXXXXXXGPVSATAMLSQGLKSSR 336
BLAST of mRNA_L-elsbetiae_contig5924.14399.1 vs. uniprot
Match: A0A6H5KM35_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM35_9PHAE) HSP 1 Score: 184 bits (468), Expect = 1.250e-53 Identity = 177/219 (80.82%), Postives = 183/219 (83.56%), Query Frame = 1 Query: 1 MSEINVSKLKVSELKAELAQRSLDVKGNKADLAQRLQAALDEEEFGAIAVPTPTATNGDAAAAATAPELGNGGAAEDPDVEATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAARLAKRVERFGRIAPVTQTEAAEXXXXXXXXXXXPEPAAGGKAGTKRTLNPEEEAKKKKRMERFGIVDEKLEAAKRAEAEAA 657 MSEINVSKLKVSELKAELA RSLDVKGNKADLAQRLQAALDEEEFGAI++PTPT GDAA E GNG AAE A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EA RLAKRVERFGRIAPVT+ E AE PEPAAGGK GTKR+LNPEEEAK+KKRMERFGIVDEK EAAKRAEAE + Sbjct: 1 MSEINVSKLKVSELKAELASRSLDVKGNKADLAQRLQAALDEEEFGAISMPTPTV--GDAAT-----EAGNGTAAE----PAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAMRLAKRVERFGRIAPVTEREVAEKMAMRREKFGLPEPAAGGKQGTKRSLNPEEEAKRKKRMERFGIVDEKEEAAKRAEAEVS 208
BLAST of mRNA_L-elsbetiae_contig5924.14399.1 vs. uniprot
Match: A0A835Z395_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z395_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.320e-7 Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 1 Query: 1 MSEINVSKLKVSELKAELAQRSLDVKGNKADLAQRLQAALDEEEFG 138 MSE+N K+KV++LKAELA+R+LD G K DL QRLQAALDEEEFG Sbjct: 1 MSEVNPQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFG 46
BLAST of mRNA_L-elsbetiae_contig5924.14399.1 vs. uniprot
Match: B7G614_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G614_PHATC) HSP 1 Score: 61.6 bits (148), Expect = 1.710e-7 Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 1 Query: 1 MSEINVSKLKVSELKAELAQRSLDVKGNKADLAQRLQAALDEEEFGAIAVPTPT 162 M EI++ K+KV+EL+ EL +R L V GNK DL RLQA LDEEEFG I P T Sbjct: 1 MGEIDIKKMKVAELRTELERRGLPVSGNKPDLINRLQARLDEEEFGLIDAPATT 54
BLAST of mRNA_L-elsbetiae_contig5924.14399.1 vs. uniprot
Match: A0A8B9C943_9AVES (SAP domain-containing protein n=2 Tax=Galloanserae TaxID=1549675 RepID=A0A8B9C943_9AVES) HSP 1 Score: 57.0 bits (136), Expect = 3.450e-7 Identity = 35/62 (56.45%), Postives = 40/62 (64.52%), Query Frame = 1 Query: 4 SEINVSKLKVSELKAELAQRSLDVKGNKADLAQRLQAALDEEEFGAIAVPTPTATNGDAAAA 189 S +NV KLKVSELK EL +R L KG KADL +RLQAALD+EE G P + G AA Sbjct: 4 SPVNVKKLKVSELKEELKKRRLSDKGLKADLMERLQAALDQEEAGXXXXVNPPPSRGRGGAA 65
BLAST of mRNA_L-elsbetiae_contig5924.14399.1 vs. uniprot
Match: A0A7S1D3T5_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D3T5_CYCTE) HSP 1 Score: 60.5 bits (145), Expect = 9.490e-7 Identity = 32/54 (59.26%), Postives = 38/54 (70.37%), Query Frame = 1 Query: 7 EINVSKLKVSELKAELAQRSLDVKGNKADLAQRLQAALDEEEFGAIAVPTPTAT 168 E+NV K+KVSEL+A L +R L +G KADL RLQA LDEEEFG + P T T Sbjct: 26 EMNVKKMKVSELRAALQKRGLSTEGLKADLVNRLQARLDEEEFGMVVAPQSTET 79
BLAST of mRNA_L-elsbetiae_contig5924.14399.1 vs. uniprot
Match: A0A7S3LF45_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LF45_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.230e-6 Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 1 MSEINVSKLKVSELKAELAQRSLDVKGNKADLAQRLQAALDEEEFGAI 144 MSE+++ K+KV+ELKAEL++R L G KA+L RLQA LDEEEFG + Sbjct: 1 MSEVDIKKMKVTELKAELSKRGLSTDGLKAELVNRLQARLDEEEFGLV 48
BLAST of mRNA_L-elsbetiae_contig5924.14399.1 vs. uniprot
Match: A0A8C8AEA1_9STRI (SAP domain-containing protein n=1 Tax=Otus sunia TaxID=257818 RepID=A0A8C8AEA1_9STRI) HSP 1 Score: 54.7 bits (130), Expect = 1.520e-6 Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1 Query: 4 SEINVSKLKVSELKAELAQRSLDVKGNKADLAQRLQAALDEEEFG 138 S +NV KLKVSELK EL +R L KG KA+L +RLQAALD+EE G Sbjct: 4 SPVNVKKLKVSELKEELKKRRLSDKGLKAELMERLQAALDQEEAG 48
BLAST of mRNA_L-elsbetiae_contig5924.14399.1 vs. uniprot
Match: A0A8C1HC93_CYPCA (SAP domain-containing protein n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1HC93_CYPCA) HSP 1 Score: 55.1 bits (131), Expect = 2.490e-6 Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 1 Query: 1 MSEINVSKLKVSELKAELAQRSLDVKGNKADLAQRLQAALDEEEFG 138 MS +NV KLKV+ELK EL +R LD +G KADLA RLQAAL+ E G Sbjct: 1 MSGLNVKKLKVNELKEELQRRGLDTRGLKADLADRLQAALEAEAAG 46
BLAST of mRNA_L-elsbetiae_contig5924.14399.1 vs. uniprot
Match: A0A662YTL2_ACIRT (Heterogeneous nuclear ribonucleoprotein U-like protein 1 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A662YTL2_ACIRT) HSP 1 Score: 59.7 bits (143), Expect = 4.330e-6 Identity = 33/59 (55.93%), Postives = 39/59 (66.10%), Query Frame = 1 Query: 1 MSEINVSKLKVSELKAELAQRSLDVKGNKADLAQRLQAALDEEEFGAIAVPTPTATNGD 177 MS ++V KLKV ELK EL R L+ +G KADLA+RLQAALD E G P P A G+ Sbjct: 1 MSSVDVKKLKVHELKEELQARGLEARGLKADLAERLQAALDSEALGVGVAPPPAAVPGE 59 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5924.14399.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5924.14399.1 >prot_L-elsbetiae_contig5924.14399.1 ID=prot_L-elsbetiae_contig5924.14399.1|Name=mRNA_L-elsbetiae_contig5924.14399.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=337bp MSEINVSKLKVSELKAELAQRSLDVKGNKADLAQRLQAALDEEEFGAIAVback to top mRNA from alignment at L-elsbetiae_contig5924:2672..6185- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5924.14399.1 ID=mRNA_L-elsbetiae_contig5924.14399.1|Name=mRNA_L-elsbetiae_contig5924.14399.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3514bp|location=Sequence derived from alignment at L-elsbetiae_contig5924:2672..6185- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5924:2672..6185- >mRNA_L-elsbetiae_contig5924.14399.1 ID=mRNA_L-elsbetiae_contig5924.14399.1|Name=mRNA_L-elsbetiae_contig5924.14399.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2022bp|location=Sequence derived from alignment at L-elsbetiae_contig5924:2672..6185- (Laminarionema elsbetiae ELsaHSoW15)back to top |