prot_L-elsbetiae_contig5861.14327.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5861.14327.1
Unique Nameprot_L-elsbetiae_contig5861.14327.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length445
Homology
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BLAST of mRNA_L-elsbetiae_contig5861.14327.1 vs. uniprot
Match: A0A6H5JSS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSS0_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.410e-6
Identity = 34/40 (85.00%), Postives = 35/40 (87.50%), Query Frame = 0 
Query:  290 AGREISDIDRRLGELHEFLKRAKEGG-LGA---LPLPPAP 325
            AGREISDIDRRLGELHEFLKRAKEGG +GA   L LPPAP
Sbjct:  633 AGREISDIDRRLGELHEFLKRAKEGGGVGAGLPLALPPAP 672
[Close]
BLAST of mRNA_L-elsbetiae_contig5861.14327.1 vs. uniprot
Match: D7G256_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G256_ECTSI)

HSP 1 Score: 56.6 bits (135), Expect = 6.210e-5
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0 
Query:  290 AGREISDIDRRLGELHEFLKRAKEGG 315
            AGREISDIDRRLGELHEFLKRAKEGG
Sbjct:  484 AGREISDIDRRLGELHEFLKRAKEGG 509
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5861.14327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSS0_9PHAE1.410e-685.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G256_ECTSI6.210e-5100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5861contigL-elsbetiae_contig5861:1311..3715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5861.14327.1mRNA_L-elsbetiae_contig5861.14327.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5861 1126..6738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5861.14327.1 ID=prot_L-elsbetiae_contig5861.14327.1|Name=mRNA_L-elsbetiae_contig5861.14327.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=445bp
MIRPRNASTSPTNLGRRKGGTRSGEGGGGGGGGGGGGRGFLRLVRRVPPP
PQRDSGNSSAATSASGRQQRQDPWLADGDGDDDERSRRGEDDDGDGRFRR
RPGTTAAGTGAGTGAGGEGRRAPAERSSRSDRDRDRDRDRGRGGGRSFGG
EGAGWEGPPPSGLGGLASSRGSLGSSSLRSSGTRRRVELRTPAEEEAVRK
SQELSSSLTALRKSRPTGDGYSSGGSSRRGVSRGAGRVAEREWPAAEEEE
EGEARRAHVFSTSGGVEERKQQRRQGSATAVAAPTMDPLAGREISDIDRR
LGELHEFLKRAKEGGLGALPLPPAPPSTAESRSPRPLASVIAPEVAVSPP
PAGGAAGDDDEDAARLSGSIPAAAAESRTFELSEEKSQSSPPPPAADVAG
QVGGVQRKSGSRSVDDGDDAGVVENWQQGGGAGSGAWHVDEVEE*
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