prot_L-elsbetiae_contig5855.14315.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5855.14315.1
Unique Nameprot_L-elsbetiae_contig5855.14315.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length874
Homology
BLAST of mRNA_L-elsbetiae_contig5855.14315.1 vs. uniprot
Match: D7G143_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G143_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 2.040e-64
Identity = 233/724 (32.18%), Postives = 294/724 (40.61%), Query Frame = 0
Query:  315 VLSARWGLGLLQQWAADDSIFKALESPTPCEGGVRRRDRCLNRVNVDEATYVSRHPRNSNNSKARSIQAPTRTKPGQDAKQGVARTAASTKEFGQEGC-LRLSTPAGESGLSLAWTN--SRNDQISIHLFTPGGI------------------------------------------------------------------------------------QGPWTELYRG--RGEKFDVEGLGPCRRYLFRARLSAPVVARRRV-IWRHASFCTLPNRPLPPIAMRWTPG-----ETISRGGGYGKTSFGATGLDTPAVLGGGSDSSRG--QNLRLKM-----AGGGYPKQRDGMRSTPDAATQKQ-----HLLGEDCSTWIVEYRAQLRPRGNQLWSTGTKAALEWTGEPQATSSTGSGCSRSTQDGDKSDG----------------------------NDSQKHRDGKDGDISWERAYRGKRSECVVGSLVQGVPYAFRCARENADGKVGPWSADLRCVVPCSPGK------CGGRSGARRENN-------NVAG------HGGAVPHRLP-----PPPEAKTLKSPPRRQKHRFDLLVPALIEAFAELVDAGDDQIARATPVNTRLTQPPLPSSPPP-----APHPVARIRSKGSAAKSVAVKTTSDAEGRAHRHEQPVSLEGK-GERNKMIWEEHWESQRRAPFFRLRGQDLSVWQIPAL 873
            +  + WGL LL+QWAADD++F A E P+P E               ++A   S    N  +   R  QA     P + +      ++A T   G  G  LRL+    E  LSL      S  +++++ LFTPGG+                                                                                    +  WT LYRG  RG K  V+GL P RRY FR+RLS  + A RR   WRHASFCTLP RP  P+A  W PG         R G    TS G + L   +VL GG    +   +NLRLKM     +  G P   +G+  T + AT+ +     H   EDC  W+VE R +LR  G   W T  + ALEW G   AT           + G  S G                                +  +  D    WE  YRG+RS CVVGSL  G  YAFRCARENADG+VGPWS DL C VP S  K      CG R     +N        +VAG      +G + P  +      P  E+K  +  PR     F+LLVPAL++AFA L + GD  I      +TR T    P  PPP        P A                        H      S   + GE  KM+W+EHW+S+RR PFF LRG+DLSVWQIPAL
Sbjct:   21 LFGSLWGLSLLRQWAADDTVFDAFERPSPSE---------------EDAQRPSNGHLNDRSGARRREQAMETVVPCKGSSTTARASSAGTGGLGHGGGDLRLAATPRERELSLVLEAMPSVGEEVAVDLFTPGGVGACMRNGQMQAQARTALCSRCAPSGGGGRTALCSVVKNYPNRSCWFFSFAVFRECSSAVTKATLSPPPSPCQLQLNVDFRWTGSRAQWTALYRGPSRG-KLRVDGLEPGRRYRFRSRLSTSMGAGRRGGSWRHASFCTLPERPPAPVAAGWLPGGPALSAETPRLGDDRDTSGGNSRLRRLSVLSGGDARGKNGFENLRLKMGVERSSTCGRP---EGIPLTSETATRNKTEGPWHKSAEDCGMWVVECRTRLRFTGGYAWCTDDRTALEWAGGVGATKGP-------AESGVNSAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXQELRSEESMDAGAPWELVYRGRRSMCVVGSLSLGSSYAFRCARENADGQVGPWSTDLWCTVPGSTKKFDRRSSCGNRKRNASDNRKTARGDPHVAGDATLLLNGISSPDAIAGNQPRPMSESKATEFQPR-----FNLLVPALVDAFARLAEDGDRWIG-----STRST----PLRPPPRRAVATRRPAAXXXXXXXXXXXXXXXXXXXXXXXXHGASSKGSGSAQQGETAKMVWDEHWDSERRIPFFSLRGRDLSVWQIPAL 704          
BLAST of mRNA_L-elsbetiae_contig5855.14315.1 vs. uniprot
Match: A0A6H5KWT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT3_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 2.350e-46
Identity = 130/339 (38.35%), Postives = 161/339 (47.49%), Query Frame = 0
Query:  587 WIVEYRAQLRPRGNQLWSTGTKAALEWTGEPQAT---------------------SSTGSGCSRSTQDGDKSDGNDSQKHRDGKDGDISWERAYRGKRSECVVGSLVQGVPYAFRCARENADGKVGPWSADLRCVVPCSPGKCGGRS-GARRENN----------------------NVAGHGGAVPHRLPPP-PEAKTLKSPPRRQKHRFDLLVPALIEAFAELVDAGDDQIARATPVNTRLTQPPLPSSPPPAPHPVARIRSKGSAAKSVAVKTTSDAEGRAH--RHEQPVSLEG-----KGERNKMIWEEHWESQRRAPFFRLRGQDLSVWQIPAL 873
            W+VE R +LR  G   W T  + ALEW G   AT                     S+T + C  +  D D   G    +  +G      WE  YRG+RSECVVGSL  G  YAFRCARENADG+VGPWS DLRC VP S      RS G  R++N                      N  G   A+    P P PE+K  +  PR     F+LLVPAL++ FA L + G   I      +T L QPP        P  VA  R+  ++               AH   H+   S +G     +GE  KM+W+EHW+S+RR PFF LRG+DLSVWQIPAL
Sbjct:    2 WVVECRTRLRFTGGYAWCTDDRTALEWAGGASATKGPTESGVNSAGAAADDRNNSSTTINLCHSAQGDADDDGGGQELRSEEGTGAGAPWELVYRGRRSECVVGSLSLGSSYAFRCARENADGQVGPWSTDLRCTVPGSTENFDRRSSGGNRKSNTSDNRMTSRADPHVAGDATRLLNGIGSSDAIAGNQPRPMPESKATEFQPR-----FNLLVPALVDVFARLAEDGSRWIGSTH--STPLRQPP--------PRAVASSRTAATSXXXXXXXXXXXXXXXAHDREHQHWASSKGSGSAQQGETAKMVWDEHWDSERRIPFFCLRGRDLSVWQIPAL 325          
BLAST of mRNA_L-elsbetiae_contig5855.14315.1 vs. uniprot
Match: A0A6H5KI78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI78_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 1.570e-22
Identity = 102/312 (32.69%), Postives = 129/312 (41.35%), Query Frame = 0
Query:  320 WGLGLLQQWAADDSIFKALESPTPCEGGVRRRDRCLNRVNVDEATYVSRHPRNSNNSKARSIQAPTRTKPGQDAKQGVARTAASTKEFGQEGC-LRLSTPAGESGLSLAW--TNSRNDQISIHLFTPGG----------------------------------------------------------------IQGPWTELYRGRGE-KFDVEGLGPCRRYLFRARLSAPVVARRRV-IWRHASFCTLPNRPLPPIAMRWTPG------ETISRGGGYGKTSFGATGLDTPAVLGGGSDSSRG--QNLRLKM 554
            WGL LL+QWAADD++F A E P+P E               ++A   S    N  +   R  QA     P + +      ++A T   G  G  LRL+    E  LSLA   T S  +++++ LFTPGG                                                                 +  WT LYRGR   K  V+GL PCRRY FR+RLS P+ A RR   WRHASFCTLP RP  P+A  W PG      ET   G     TS G + L   ++L GG    +   +NLRLKM
Sbjct:    8 WGLSLLRQWAADDTVFNAFERPSPSE---------------EDAQRPSNGHLNDRSGVRRREQARATVVPCKGSSTTARASSACTGGLGHGGGDLRLTATPRERELSLALEATPSVGEEVAVDLFTPGGEIACVQKGRMQSRARTAFCSRCAPFGGGRRTASCRVVKNYLSRSCSLLSFALFRECSSAVTKQRSRAQWTALYRGRSRGKLHVDGLEPCRRYRFRSRLSTPMGAGRRGGSWRHASFCTLPERPPAPVAAGWLPGGPALSAETPCLGDDL-DTSGGNSCLRRLSILSGGDARGKNGFKNLRLKM 303          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5855.14315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G143_ECTSI2.040e-6432.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWT3_9PHAE2.350e-4638.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KI78_9PHAE1.570e-2232.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5855contigL-elsbetiae_contig5855:5953..11241 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5855.14315.1mRNA_L-elsbetiae_contig5855.14315.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5855 5948..11858 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5855.14315.1 ID=prot_L-elsbetiae_contig5855.14315.1|Name=mRNA_L-elsbetiae_contig5855.14315.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=874bp
MGRPSAEARGLLQRRGRCLRAWCSKAWETFRPRTNADLPSQPEEQPAHEL
IFLRQSPPSFKERRSWPTVANDSRGEGPWCREAGVGVGSDAEYGYPATHG
GMPGTLAREKRETTAQDADLCAAVERSLLVPCLWSDAASLAPAAPEKASP
ATIEKVADQPQEEQQDNNAERSAPPATVGVEATTTTPHESGAEKQEGRVS
CMIEARVRAGDWVLPNRVGVSNALGGKRENGWLRVEAVSVGEECIILATR
GTGGTRAPELRSSLKLLEISPALLTGALVVRQTPPPDSNGREHVEGRAST
EGCDEGETEAFRLPVLSARWGLGLLQQWAADDSIFKALESPTPCEGGVRR
RDRCLNRVNVDEATYVSRHPRNSNNSKARSIQAPTRTKPGQDAKQGVART
AASTKEFGQEGCLRLSTPAGESGLSLAWTNSRNDQISIHLFTPGGIQGPW
TELYRGRGEKFDVEGLGPCRRYLFRARLSAPVVARRRVIWRHASFCTLPN
RPLPPIAMRWTPGETISRGGGYGKTSFGATGLDTPAVLGGGSDSSRGQNL
RLKMAGGGYPKQRDGMRSTPDAATQKQHLLGEDCSTWIVEYRAQLRPRGN
QLWSTGTKAALEWTGEPQATSSTGSGCSRSTQDGDKSDGNDSQKHRDGKD
GDISWERAYRGKRSECVVGSLVQGVPYAFRCARENADGKVGPWSADLRCV
VPCSPGKCGGRSGARRENNNVAGHGGAVPHRLPPPPEAKTLKSPPRRQKH
RFDLLVPALIEAFAELVDAGDDQIARATPVNTRLTQPPLPSSPPPAPHPV
ARIRSKGSAAKSVAVKTTSDAEGRAHRHEQPVSLEGKGERNKMIWEEHWE
SQRRAPFFRLRGQDLSVWQIPAL*
back to top