prot_L-elsbetiae_contig5849.14302.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5849.14302.1
Unique Nameprot_L-elsbetiae_contig5849.14302.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length703
Homology
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BLAST of mRNA_L-elsbetiae_contig5849.14302.1 vs. uniprot
Match: A0A6H5K8B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8B2_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.150e-26
Identity = 62/87 (71.26%), Postives = 72/87 (82.76%), Query Frame = 0 
Query:    2 SGGRGLPLSEMPSCPGRFVLRGTCCGTPANKNSAARSKHNVRTALEGFEALGGVRGVWLRGEEAILVGDHEATWGLLGELYRRHGRI 88
            SGGRGLPLSE+PSCPGRFVL+GTC G PAN   AAR+KHNVR+AL  F ALGG+ G WLRGE AIL GDHEATWGL+ ++Y+R  R+
Sbjct:  487 SGGRGLPLSEIPSCPGRFVLKGTC-GAPAN---AARAKHNVRSALSAFAALGGIGGTWLRGETAILEGDHEATWGLIYDVYKRVRRV 569
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5849.14302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K8B2_9PHAE2.150e-2671.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5849contigL-elsbetiae_contig5849:3210..6016 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5849.14302.1mRNA_L-elsbetiae_contig5849.14302.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5849 2509..6039 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5849.14302.1 ID=prot_L-elsbetiae_contig5849.14302.1|Name=mRNA_L-elsbetiae_contig5849.14302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=703bp
MSGGRGLPLSEMPSCPGRFVLRGTCCGTPANKNSAARSKHNVRTALEGFE
ALGGVRGVWLRGEEAILVGDHEATWGLLGELYRRHGRIRSLRMLHSRPQQ
QLQKIIAQPEQQDELQHNQPSQQQQRQQHRRMQHEQHEQPRQQRKQQRTS
QRFRATTQPASPDPARPSPTYQCHRISLASHGDRHAPEGVSPPTTPRQPT
AIATSRATGVAALQASAPALRLKSRHRGRSPASGAYESNPSSTGNRVVDH
SRRVAETACMSQREKGRRVKPLPTPRAASTADSFRKGTDYGNDGGPANNF
DEGVEGRRAKKGGNAAAGIEHSAPSEQNNRRQLSGKGEDDEVDSNLHPPT
GVPHSVSTPLFGSNDVNAAAPSPKKTPKRVGESGTRGLVSKVTRSSLESA
RQSHGVEQIPDSENAIRLSRTRNLRDAGALISLSQAGERASAETARWLRW
NPASRESSLVGMTGQDRGEKPIPPDKAIGEIRGNEESVCHTCSSSLEGAT
ASVNAAVPAVIPPSSVSNTDHCVVVQPLSAAALPRPRQIDIGVEADTPIG
RNIVHPRSDAAAFDLRNTRNQGPQLSPMEESPFVDSPLSKTEAGWPGAAC
EEHVEQPGAIAEPLLDRLTSGNLHQLPSADDGPRHPLEMRVTQSINGGRV
GGDGVNQLSLADLTTFDDIKTPSVCMLLALSSDPFARGVTSDLLPVAHMS
RK*
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