prot_L-elsbetiae_contig5839.14287.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5839.14287.1
Unique Nameprot_L-elsbetiae_contig5839.14287.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length377
Homology
BLAST of mRNA_L-elsbetiae_contig5839.14287.1 vs. uniprot
Match: D7G5H2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H2_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 1.390e-93
Identity = 157/213 (73.71%), Postives = 167/213 (78.40%), Query Frame = 0
Query:  168 MTTTEIAFCAMRMYSHFRRTEGNYKRLTVMQNAENVPPVYEIIWRCDGTSDGNPKGVSRFFSSTDGTDAEQQKSLLACLLALSWDGSASSRRTLQRALTPTRSSQIPAPEDIFWDEFKDNTDALSGDDEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----SAGNGRTEDENVTIEHGDIMQALSGAHLREVGIAIKEARPGWQEAHVQ 375
            MTTTEIAFCAMRMYSHFRRTEGNYKRLTVMQNAENVPPVYEIIW+CDGTS+GNP+G SRFFSST GTDAEQQKSLLACLLALSWDGS SSR+TLQRALTPTR S++P+PEDIFWDEFKD+TDALSGDDEM                                   +AG G  E E   IEHGDIMQALSGAHLRE+GIAIKEARPGWQEAHVQ
Sbjct:    1 MTTTEIAFCAMRMYSHFRRTEGNYKRLTVMQNAENVPPVYEIIWQCDGTSEGNPEGESRFFSSTSGTDAEQQKSLLACLLALSWDGSTSSRKTLQRALTPTRPSKVPSPEDIFWDEFKDSTDALSGDDEMVVVARMVLLVAESANKPGQDGVSSGASSSGVPPEATAGGGE-EREKEGIEHGDIMQALSGAHLREIGIAIKEARPGWQEAHVQ 212          
BLAST of mRNA_L-elsbetiae_contig5839.14287.1 vs. uniprot
Match: A0A6H5KUU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU0_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 2.970e-35
Identity = 131/348 (37.64%), Postives = 153/348 (43.97%), Query Frame = 0
Query:   30 VPRNVSMEESGGTNPLYKNGAPPDTSGSGLDSQSTATPGRSRFSTFLG--TPARLRRLAVRMGTKSPAPSSAAGSQRSGSSNRHSRTGSSSSKSRKHRRQETFPGAYSQRNSSELDHQRPPADPVYTFMIKTIAAKGFKFMTTTEIAFCAMRMYSHFRRTEGNYKRLTVMQNAENVPPVYEIIWRCDGTSDGNPKGVSRFFSSTDGTDAEQQKSLLACLLALSWDGSASSRRTLQRALTPTRSSQIPAPEDIFWDEFKDNTDALSGDDEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGNGRTEDENVTIEHGDIMQALSGAHLREVGIAIKEARPGWQEAHVQ 375
            +PRNVSMEES GTNPLYK  AP   S S  +SQ   TPGRSR STFLG  TP+RLRRLA R+G KSPA S+++   +                   HRRQ +FPGAYSQRNSSELDHQRPPADPVYTFMIK                                                                       STD    + +  ++A ++ L  +   S+ +  Q  ++   SS    PE                                                  +AG G  E E   IEHGDIMQALSGAHLRE+GIAIKEARPGWQEAHVQ
Sbjct:  412 IPRNVSMEESVGTNPLYKTVAPYSRSTS--ESQPEQTPGRSRLSTFLGNATPSRLRRLAARVG-KSPALSASSRRSKPSXXXXXXXXXXXXXXXXXHRRQGSFPGAYSQRNSSELDHQRPPADPVYTFMIK----------------------------------------------------------------------DSTDALSGDDEMVVVARMVLLVAE---SANKPGQDGVSSGASSSGVPPE-------------------------------------------------ATAGGGE-EREKEGIEHGDIMQALSGAHLREIGIAIKEARPGWQEAHVQ 633          
BLAST of mRNA_L-elsbetiae_contig5839.14287.1 vs. uniprot
Match: D7G5H1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5H1_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 1.290e-22
Identity = 77/132 (58.33%), Postives = 87/132 (65.91%), Query Frame = 0
Query:   30 VPRNVSMEESGGTNPLYKNGAPPDTSGSGLDSQSTATPGRSRFSTFLG--TPARLRRLAVRMGTKSPAPSSAAGSQRSGSSNRHSRTGSSSSKSRKHRRQETFPGAYSQRNSSELDHQRPPADPVYTFMIKT 159
            +PRNVSMEES GTNPLYK  AP   S +  +SQS  TPGRSRFSTFLG  TP+RLRRLA R+  KSPA S+++                            +FPGAYSQRNSSELDHQRPPADPVYTFMIK+
Sbjct:  412 IPRNVSMEESVGTNPLYKTAAPYRRSTN--ESQSEQTPGRSRFSTFLGNATPSRLRRLAGRV-AKSPALSASSRRXXXXXXXXXXXXXXXXXXXXXXXXXGSFPGAYSQRNSSELDHQRPPADPVYTFMIKS 540          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5839.14287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5H2_ECTSI1.390e-9373.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUU0_9PHAE2.970e-3537.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5H1_ECTSI1.290e-2258.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5839contigL-elsbetiae_contig5839:6577..11909 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5839.14287.1mRNA_L-elsbetiae_contig5839.14287.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5839 6577..11909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5839.14287.1 ID=prot_L-elsbetiae_contig5839.14287.1|Name=mRNA_L-elsbetiae_contig5839.14287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=377bp
GRGAGNGVDGGAVAAAASEGSGDGGDKIHVPRNVSMEESGGTNPLYKNGA
PPDTSGSGLDSQSTATPGRSRFSTFLGTPARLRRLAVRMGTKSPAPSSAA
GSQRSGSSNRHSRTGSSSSKSRKHRRQETFPGAYSQRNSSELDHQRPPAD
PVYTFMIKTIAAKGFKFMTTTEIAFCAMRMYSHFRRTEGNYKRLTVMQNA
ENVPPVYEIIWRCDGTSDGNPKGVSRFFSSTDGTDAEQQKSLLACLLALS
WDGSASSRRTLQRALTPTRSSQIPAPEDIFWDEFKDNTDALSGDDEMVVV
ARVVVLVADSSNKPGEEASSPVTTAAASAGNGRTEDENVTIEHGDIMQAL
SGAHLREVGIAIKEARPGWQEAHVQVR
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