prot_L-elsbetiae_contig5779.14191.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5779.14191.1
Unique Nameprot_L-elsbetiae_contig5779.14191.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length537
Homology
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: A0A6H5L6Q5_9PHAE (SREBP regulating gene protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q5_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 3.680e-56
Identity = 174/419 (41.53%), Postives = 197/419 (47.02%), Query Frame = 0
Query:  154 RRRRVSLGPDAIPSVVLIERRPAG---------GARRSSSLD--AGAEEGRETASAEGRGGGLVDQPRR--RCRNTAQGAVLLADSEGRVCRRSEV-----DDV---HRPGCCAARPPPRESYVDRGIAG------------------SHVAAAASAASAGTTKVQTGRVLEPAALPLLTHGGTATAATXXXXXXAAENQPRGDVIGGVGFPPEQALSAPFSCWSCDEGGEGADNGXXXXXXXXAYYSSCCRSYEFCVSCCQAPSREQEREAIREAAARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRPPVIAPGVLTAGAQGQALPAGRGDEVARSNGGGQEAPPLQLDPFLASL 533
            RR  VSLGPDAIPSV+L+ER P+G         GAR++SSL    GA  G      E RGG   +      RCRNT QGA L+ADSEGRVC R+E+     DD    HRPG                                      H  AA  +  A TT+ +T R +E          G  +         A              FPPE+ALS PFSCWSCD G +G  +G XXXXXXX        SYEFCVSCCQ P R +EREAI+ +AA SGHP YR+L    G                                    + R ARE AFAHCAFRCRTYSGSV HENSYR PLKHCFGRFRPP        A A   ALP GR   V      G  APP Q+DP L  L
Sbjct:  152 RRPAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDVTGAVLGDGGGGGEIRGGEGRENSSNPYRCRNTVQGATLVADSEGRVCHRAELIVEEGDDXXVRHRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKHKHPPAAPHSGPA-TTRTETRRGVE----------GGVSVELVELGELAHGXXXXXXXXXXXXFPPEEALSTPFSCWSCDVGEDGP-SGNXXXXXXXXXXXXXXSSYEFCVSCCQNPQRGKEREAIQASAALSGHPAYRDL---LGPGNNDASNRRELPPPRQLQASHAAAEAGVEKSQEEAEERDAREMAFAHCAFRCRTYSGSVVHENSYRSPLKHCFGRFRPPA-------ASAAAAALPGGRAGVVEGRESRG--APPHQVDPLLFDL 546          
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: D7FXG4_ECTSI (SREBP regulating gene protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG4_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 5.130e-51
Identity = 171/405 (42.22%), Postives = 190/405 (46.91%), Query Frame = 0
Query:  154 RRRRVSLGPDAIPSVVLIERRPAG---------GARRSSSL--DAGAEEGRETASAEGRGGGLVDQPRRRCRNTAQGAVLLADSEGRVCRRSEV--------------DDVHRPGCCAARPPPRESYVDRGIAGSHVAAAASAASAGTTKVQTGRVLEPAALPLLTHGGTATAATXXXXXXAAENQPRGDVIGGVGFPPEQALSAPFSCWSCDEGGEGADNGXXXXXXXXAYYSSCCRSYEFCVSCCQAPSREQEREAIREAAARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRPPVIAPGVLTAGAQGQALPAGRGDEVARSNGGGQEAPPLQLDPFLASL 533
            RR  VSLGPDAIPSV+L+ER P+G         GAR++SSL   AGA  G       G  G        RCRNT QGA L+ADSEGRVC R+E+                                                                                 XXXXXX                  E+ALS PFSCWSCD G +G  +G          +SSCC SYEFCVSCCQ P R +EREAI+ +AA SGHP YR+L              XXXXXXXXXXXXX              + R ARE AFAHCAFRCRTYSGSVAHENSYR PLKHCFGRFRPP        A A   ALP G G  V    G  + APPLQLDP L +L
Sbjct:  153 RRPAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDPAGAVPGGGGGETRGGRGRENSSNPYRCRNTVQGATLVADSEGRVCHRAELVVEEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEALSTPFSCWSCDVGEDGP-SGSNGGGNDSPSFSSCCSSYEFCVSCCQNPQRGEEREAIQASAALSGHPAYRDLLGSGNNDAANGREPXXXXXXXXXXXXXEAGGVEKNGQQVEAEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPPA-------ASAAAAALPGGWGGVV--EGGESRGAPPLQLDPLLFAL 547          
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: T0QMQ3_SAPDV (SREBP regulating gene protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QMQ3_SAPDV)

HSP 1 Score: 62.0 bits (149), Expect = 9.730e-7
Identity = 49/162 (30.25%), Postives = 56/162 (34.57%), Query Frame = 0
Query:  327 PEQALSAPFSCWSCDEGGEGADNGXXXXXXXXAYYSSCCRSYEFCVSCCQAPSREQEREAIREAA--ARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRP 486
            P  A +  FSC SC+                      CC  YE CVSCC +P     RE +R     A   HPVY        GA                                         + F  CAFRCRT S SV H+NSYR   KHC+G  RP
Sbjct:  204 PVAASTVTFSCTSCNVAAP-----------------HCCSEYERCVSCCMSPDH---REILRHFLLHANPAHPVY--------GAPHHL-------------------------------------SVFGFCAFRCRTSSASVQHQNSYRSTKKHCYGLHRP 300          
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: A0A7S3UXD3_HETAK (SREBP regulating gene protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXD3_HETAK)

HSP 1 Score: 61.2 bits (147), Expect = 1.900e-6
Identity = 37/128 (28.91%), Postives = 52/128 (40.62%), Query Frame = 0
Query:  362 SSCCRSYEFCVSCCQAPSREQEREAIREAAARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRPPVI 489
            S CC+ YE CVSCC  P+    R+ + +  ++S H VY+   L                                                F  C ++CRT SGSV +ENSYR P+K+C+G   P +I
Sbjct:  107 SHCCQEYEMCVSCCMDPAN---RDVLEKFKSQSTHFVYQHTPL-----------------------------------------------GFEFCRYKCRTSSGSVQNENSYRNPVKYCYGELLPELI 184          
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: A0A067CTZ4_SAPPC (SREBP regulating gene protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CTZ4_SAPPC)

HSP 1 Score: 60.1 bits (144), Expect = 4.160e-6
Identity = 47/156 (30.13%), Postives = 55/156 (35.26%), Query Frame = 0
Query:  332 SAPFSCWSCDEGGEGADNGXXXXXXXXAYYSSCCRSYEFCVSCCQAPS-REQEREAIREAAARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRP 486
            ++ FSC SC                  A    CC +YE CVSCC  P  RE  R  +  A     HPVY        GA                                         + F  CAFRCR+ S SV H+NSYR   KHC+G  RP
Sbjct:  207 ASAFSCTSCS-----------------AAAPHCCSAYERCVSCCMGPDHREMVRHFLLHATP--AHPVY--------GAPHHL-------------------------------------SVFGFCAFRCRSSSASVQHQNSYRSSRKHCYGLHRP 298          
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: A0A7S3EBV5_9RHOD (SREBP regulating gene protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EBV5_9RHOD)

HSP 1 Score: 53.1 bits (126), Expect = 5.000e-5
Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 0
Query:  448 AREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRPPVIAP 491
            A    F  CA  C+++SGSV HENSYR P  HC+   RPP + P
Sbjct:   51 ASSDTFEVCAVACKSHSGSVLHENSYRSPYHHCYEEERPPTMGP 94          
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: A0A267H3L3_9PLAT (SREBP regulating gene protein n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267H3L3_9PLAT)

HSP 1 Score: 55.5 bits (132), Expect = 5.590e-5
Identity = 46/175 (26.29%), Postives = 63/175 (36.00%), Query Frame = 0
Query:  316 RGDVIGGVGFPPEQALSAPFSCWSCDEGGEGADNGXXXXXXXXAYYSSCCRSYEFCVSCCQAPSREQEREAIREAAARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPL-KHCFGRFRPPVI 489
            R D++ G   P     S  + C +C++                  +S CC+S+EFCVSCC  P++    EA+   A   G  V   +                                                  F  C  RCRT S SV HEN+YR P+ KHCFG  +PP +
Sbjct:  119 RADLLTGGCCPYPSKRSVRYHCSACNQ------------------FSLCCKSFEFCVSCCLQPNQRPILEAVLLRARALGDKVLLRVA-----------------------------------------------DPFQLCLARCRTSSESVQHENAYRDPVNKHCFG-LQPPTL 227          
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: A0A7S2ZMH0_9RHOD (SREBP regulating gene protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMH0_9RHOD)

HSP 1 Score: 55.5 bits (132), Expect = 6.450e-5
Identity = 37/130 (28.46%), Postives = 46/130 (35.38%), Query Frame = 0
Query:  362 SSCCRSYEFCVSCCQAPSREQEREAIREAAARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRPPVIAP 491
            S CC  +EFCVSCC   S+E   E IR       + +                                                 A    F  CA  C+++SGSV HENSYR P  HC+   RPP + P
Sbjct:  142 SHCCEHFEFCVSCCL--SKESPSEQIRNMERLKIYDL-------------------------------------------------ASSDTFEVCAVACKSHSGSVLHENSYRSPYHHCYEEERPPTMGP 220          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5L6Q5_9PHAE3.680e-5641.53SREBP regulating gene protein n=1 Tax=Ectocarpus s... [more]
D7FXG4_ECTSI5.130e-5142.22SREBP regulating gene protein n=1 Tax=Ectocarpus s... [more]
T0QMQ3_SAPDV9.730e-730.25SREBP regulating gene protein n=1 Tax=Saprolegnia ... [more]
A0A7S3UXD3_HETAK1.900e-628.91SREBP regulating gene protein n=4 Tax=Heterosigma ... [more]
A0A067CTZ4_SAPPC4.160e-630.13SREBP regulating gene protein n=1 Tax=Saprolegnia ... [more]
A0A7S3EBV5_9RHOD5.000e-550.00SREBP regulating gene protein n=1 Tax=Rhodosorus m... [more]
A0A267H3L3_9PLAT5.590e-526.29SREBP regulating gene protein n=3 Tax=Macrostomum ... [more]
A0A7S2ZMH0_9RHOD6.450e-528.46SREBP regulating gene protein n=2 Tax=Rhodosorus m... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019352Uncharacterised protein family UPF0454PFAMPF10218DUF2054coord: 332..393
e-value: 1.4E-7
score: 31.7
coord: 438..481
e-value: 5.2E-7
score: 29.8
coord: 210..248
e-value: 1.1E-6
score: 28.8
IPR019352Uncharacterised protein family UPF0454PANTHERPTHR13481UNCHARACTERIZEDcoord: 205..393
coord: 441..481
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..110
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..536
NoneNo IPR availableTMHMMTMhelixcoord: 85..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5779contigL-elsbetiae_contig5779:6471..8081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5779.14191.1mRNA_L-elsbetiae_contig5779.14191.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5779 6471..8789 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5779.14191.1 ID=prot_L-elsbetiae_contig5779.14191.1|Name=mRNA_L-elsbetiae_contig5779.14191.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=537bp
MDAATPRFRLFDGRRGGGGGGGGGGGIIDHEEGGATQTLPRRRRMVTSMS
VARARRRNRRRPGTRRGLALFLLSLPGATGSRRRVALLLLLAACAAGGLV
SARLLAWAAAAVSPSSSRSSSPPKSPRHHHASSGTAAAAAESGDEAGRPR
GQTRRRRVSLGPDAIPSVVLIERRPAGGARRSSSLDAGAEEGRETASAEG
RGGGLVDQPRRRCRNTAQGAVLLADSEGRVCRRSEVDDVHRPGCCAARPP
PRESYVDRGIAGSHVAAAASAASAGTTKVQTGRVLEPAALPLLTHGGTAT
AATAVAAAAAAENQPRGDVIGGVGFPPEQALSAPFSCWSCDEGGEGADNG
GGGGGGDGAYYSSCCRSYEFCVSCCQAPSREQEREAIREAAARSGHPVYR
ELGLIKGGAAAAAADLLRKKSANQLRGVEGGGAAAAAAEEEEHQARGARE
AAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRPPVIAPGVLTAGAQG
QALPAGRGDEVARSNGGGQEAPPLQLDPFLASLRGA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019352UPF0454