mRNA_L-elsbetiae_contig5779.14191.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: A0A6H5L6Q5_9PHAE (SREBP regulating gene protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Q5_9PHAE) HSP 1 Score: 206 bits (525), Expect = 1.000e-55 Identity = 174/419 (41.53%), Postives = 197/419 (47.02%), Query Frame = 2 Query: 602 RRRRVSLGPDAIPSVVLIERRPAG---------GARRSSSLD--AGAEEGRETASAEGRGGGLVDQPRR--RCRNTAQGAVLLADSEGRVCRRSEV-----DDV---HRPGCCAARPPPRESYVDRGIAG------------------SHVAAAASAASAGTTKVQTGRVLEPAALPLLTHGGTATAATXXXXXXAAENQPRGDVIGGVGFPPEQALSAPFSCWSCDEGGEGADNGXXXXXXXXAYYSSCCRSYEFCVSCCQAPSREQEREAIREAAARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRPPVIAPGVLTAGAQGQALPAGRGDEVARSNGGGQEAPPLQLDPFLASL 1741 RR VSLGPDAIPSV+L+ER P+G GAR++SSL GA G E RGG + RCRNT QGA L+ADSEGRVC R+E+ DD HRPG H AA + A TT+ +T R +E G + A FPPE+ALS PFSCWSCD G +G +G XXXXXXX SYEFCVSCCQ P R +EREAI+ +AA SGHP YR+L G + R ARE AFAHCAFRCRTYSGSV HENSYR PLKHCFGRFRPP A A ALP GR V G APP Q+DP L L Sbjct: 152 RRPAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDVTGAVLGDGGGGGEIRGGEGRENSSNPYRCRNTVQGATLVADSEGRVCHRAELIVEEGDDXXVRHRPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKHKHPPAAPHSGPA-TTRTETRRGVE----------GGVSVELVELGELAHGXXXXXXXXXXXXFPPEEALSTPFSCWSCDVGEDGP-SGNXXXXXXXXXXXXXXSSYEFCVSCCQNPQRGKEREAIQASAALSGHPAYRDL---LGPGNNDASNRRELPPPRQLQASHAAAEAGVEKSQEEAEERDAREMAFAHCAFRCRTYSGSVVHENSYRSPLKHCFGRFRPPA-------ASAAAAALPGGRAGVVEGRESRG--APPHQVDPLLFDL 546
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: D7FXG4_ECTSI (SREBP regulating gene protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG4_ECTSI) HSP 1 Score: 192 bits (489), Expect = 1.290e-50 Identity = 171/405 (42.22%), Postives = 190/405 (46.91%), Query Frame = 2 Query: 602 RRRRVSLGPDAIPSVVLIERRPAG---------GARRSSSL--DAGAEEGRETASAEGRGGGLVDQPRRRCRNTAQGAVLLADSEGRVCRRSEV--------------DDVHRPGCCAARPPPRESYVDRGIAGSHVAAAASAASAGTTKVQTGRVLEPAALPLLTHGGTATAATXXXXXXAAENQPRGDVIGGVGFPPEQALSAPFSCWSCDEGGEGADNGXXXXXXXXAYYSSCCRSYEFCVSCCQAPSREQEREAIREAAARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRPPVIAPGVLTAGAQGQALPAGRGDEVARSNGGGQEAPPLQLDPFLASL 1741 RR VSLGPDAIPSV+L+ER P+G GAR++SSL AGA G G G RCRNT QGA L+ADSEGRVC R+E+ XXXXXX E+ALS PFSCWSCD G +G +G +SSCC SYEFCVSCCQ P R +EREAI+ +AA SGHP YR+L XXXXXXXXXXXXX + R ARE AFAHCAFRCRTYSGSVAHENSYR PLKHCFGRFRPP A A ALP G G V G + APPLQLDP L +L Sbjct: 153 RRPAVSLGPDAIPSVLLVERGPSGLPSGPALPGGARKASSLVDPAGAVPGGGGGETRGGRGRENSSNPYRCRNTVQGATLVADSEGRVCHRAELVVEEGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEALSTPFSCWSCDVGEDGP-SGSNGGGNDSPSFSSCCSSYEFCVSCCQNPQRGEEREAIQASAALSGHPAYRDLLGSGNNDAANGREPXXXXXXXXXXXXXEAGGVEKNGQQVEAEERDARELAFAHCAFRCRTYSGSVAHENSYRSPLKHCFGRFRPPA-------ASAAAAALPGGWGGVV--EGGESRGAPPLQLDPLLFAL 547
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: T0QMQ3_SAPDV (SREBP regulating gene protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QMQ3_SAPDV) HSP 1 Score: 62.0 bits (149), Expect = 1.110e-6 Identity = 49/162 (30.25%), Postives = 56/162 (34.57%), Query Frame = 2 Query: 1121 PEQALSAPFSCWSCDEGGEGADNGXXXXXXXXAYYSSCCRSYEFCVSCCQAPSREQEREAIREAA--ARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRP 1600 P A + FSC SC+ CC YE CVSCC +P RE +R A HPVY GA + F CAFRCRT S SV H+NSYR KHC+G RP Sbjct: 204 PVAASTVTFSCTSCNVAAP-----------------HCCSEYERCVSCCMSPDH---REILRHFLLHANPAHPVY--------GAPHHL-------------------------------------SVFGFCAFRCRTSSASVQHQNSYRSTKKHCYGLHRP 300
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: A0A7S3UXD3_HETAK (SREBP regulating gene protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXD3_HETAK) HSP 1 Score: 61.2 bits (147), Expect = 2.170e-6 Identity = 37/128 (28.91%), Postives = 52/128 (40.62%), Query Frame = 2 Query: 1226 SSCCRSYEFCVSCCQAPSREQEREAIREAAARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRPPVI 1609 S CC+ YE CVSCC P+ R+ + + ++S H VY+ L F C ++CRT SGSV +ENSYR P+K+C+G P +I Sbjct: 107 SHCCQEYEMCVSCCMDPAN---RDVLEKFKSQSTHFVYQHTPL-----------------------------------------------GFEFCRYKCRTSSGSVQNENSYRNPVKYCYGELLPELI 184
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: A0A067CTZ4_SAPPC (SREBP regulating gene protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CTZ4_SAPPC) HSP 1 Score: 60.1 bits (144), Expect = 4.730e-6 Identity = 47/156 (30.13%), Postives = 55/156 (35.26%), Query Frame = 2 Query: 1136 SAPFSCWSCDEGGEGADNGXXXXXXXXAYYSSCCRSYEFCVSCCQAPS-REQEREAIREAAARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRP 1600 ++ FSC SC A CC +YE CVSCC P RE R + A HPVY GA + F CAFRCR+ S SV H+NSYR KHC+G RP Sbjct: 207 ASAFSCTSCS-----------------AAAPHCCSAYERCVSCCMGPDHREMVRHFLLHATP--AHPVY--------GAPHHL-------------------------------------SVFGFCAFRCRSSSASVQHQNSYRSSRKHCYGLHRP 298
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: A0A7S3EBV5_9RHOD (SREBP regulating gene protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EBV5_9RHOD) HSP 1 Score: 53.1 bits (126), Expect = 5.500e-5 Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = 2 Query: 1484 AREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRPPVIAP 1615 A F CA C+++SGSV HENSYR P HC+ RPP + P Sbjct: 51 ASSDTFEVCAVACKSHSGSVLHENSYRSPYHHCYEEERPPTMGP 94
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: A0A267H3L3_9PLAT (SREBP regulating gene protein n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267H3L3_9PLAT) HSP 1 Score: 55.5 bits (132), Expect = 6.260e-5 Identity = 46/175 (26.29%), Postives = 63/175 (36.00%), Query Frame = 2 Query: 1088 RGDVIGGVGFPPEQALSAPFSCWSCDEGGEGADNGXXXXXXXXAYYSSCCRSYEFCVSCCQAPSREQEREAIREAAARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPL-KHCFGRFRPPVI 1609 R D++ G P S + C +C++ +S CC+S+EFCVSCC P++ EA+ A G V + F C RCRT S SV HEN+YR P+ KHCFG +PP + Sbjct: 119 RADLLTGGCCPYPSKRSVRYHCSACNQ------------------FSLCCKSFEFCVSCCLQPNQRPILEAVLLRARALGDKVLLRVA-----------------------------------------------DPFQLCLARCRTSSESVQHENAYRDPVNKHCFG-LQPPTL 227
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Match: A0A7S2ZMH0_9RHOD (SREBP regulating gene protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZMH0_9RHOD) HSP 1 Score: 55.5 bits (132), Expect = 7.230e-5 Identity = 37/130 (28.46%), Postives = 46/130 (35.38%), Query Frame = 2 Query: 1226 SSCCRSYEFCVSCCQAPSREQEREAIREAAARSGHPVYRELGLIKGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQARGAREAAFAHCAFRCRTYSGSVAHENSYRGPLKHCFGRFRPPVIAP 1615 S CC +EFCVSCC S+E E IR + + A F CA C+++SGSV HENSYR P HC+ RPP + P Sbjct: 142 SHCCEHFEFCVSCCL--SKESPSEQIRNMERLKIYDL-------------------------------------------------ASSDTFEVCAVACKSHSGSVLHENSYRSPYHHCYEEERPPTMGP 220 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5779.14191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5779.14191.1 >prot_L-elsbetiae_contig5779.14191.1 ID=prot_L-elsbetiae_contig5779.14191.1|Name=mRNA_L-elsbetiae_contig5779.14191.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=537bp MDAATPRFRLFDGRRGGGGGGGGGGGIIDHEEGGATQTLPRRRRMVTSMSback to top mRNA from alignment at L-elsbetiae_contig5779:6471..8789- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5779.14191.1 ID=mRNA_L-elsbetiae_contig5779.14191.1|Name=mRNA_L-elsbetiae_contig5779.14191.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2319bp|location=Sequence derived from alignment at L-elsbetiae_contig5779:6471..8789- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5779:6471..8789- >mRNA_L-elsbetiae_contig5779.14191.1 ID=mRNA_L-elsbetiae_contig5779.14191.1|Name=mRNA_L-elsbetiae_contig5779.14191.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3222bp|location=Sequence derived from alignment at L-elsbetiae_contig5779:6471..8789- (Laminarionema elsbetiae ELsaHSoW15)back to top |