Homology
BLAST of mRNA_L-elsbetiae_contig5739.14136.1 vs. uniprot
Match:
A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)
HSP 1 Score: 186 bits (473), Expect = 1.050e-50
Identity = 89/128 (69.53%), Postives = 105/128 (82.03%), Query Frame = 0
Query: 88 LVPCDFIEQSFGSNIQGWTLAGVRQFDMYRMVSDAVKPRQLGEPGRQKVRNMVKKVQRECWSTPTDALDLVSELKDTPGCFVKWETDDLHRLKHVLWSTGQQQVFARQWGGIVIQDNTCLTNRCGLLL 215
+VP + +E F +I+ WTLAG++QFDMYR++S+ VKP QLGEPGRQKV QRECWSTPTDALDLVSELKD GC+VK++TD LHRLKHV WSTGQQQVFARQWGGIV+QDNT LTNR +L+
Sbjct: 1 MVPGEDLEARFKGDIRRWTLAGLKQFDMYRLISELVKPLQLGEPGRQKV-------QRECWSTPTDALDLVSELKDMAGCYVKYDTDGLHRLKHVFWSTGQQQVFARQWGGIVLQDNTALTNRVLVLI 121
BLAST of mRNA_L-elsbetiae_contig5739.14136.1 vs. uniprot
Match:
A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)
HSP 1 Score: 131 bits (330), Expect = 8.920e-31
Identity = 74/162 (45.68%), Postives = 103/162 (63.58%), Query Frame = 0
Query: 52 LVRASWPADDVPKLGK-VCLTHHPDCTAEPTAVAKKD--LVPCDFIEQSFGSNIQGWTLAGVRQFDMYRMVSDAVKPRQLGEPGRQKVRNMVKKVQRECWSTPTDALDLVSELKDTPGCFVKWETDDLHRLKHVLWSTGQQQVFARQWGGIVIQDNTCLTNR 210
L R + P GK V L HH DC + A KD +VP + +E+ + +I+ TL GVR F MYR + + +KPR+LG G +KVRNM KV R W++ TDAL+LV++L+ P VKWE+D H L+ ++W++ +Q + AR +GGIVIQDNTCL NR
Sbjct: 709 LHRQGFKGKTTPVRGKKVNLEHHADCEMQHVAKKHKDDSVVPLEELEK-WADDIKSMTLGGVRPFTMYRCIGENIKPRKLGTRGVRKVRNMSDKVSRGRWASKTDALELVADLERGPAT-VKWESDANHVLRSIMWASPEQIMLARTYGGIVIQDNTCLINR 868
BLAST of mRNA_L-elsbetiae_contig5739.14136.1 vs. uniprot
Match:
D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI)
HSP 1 Score: 98.2 bits (243), Expect = 2.170e-19
Identity = 47/96 (48.96%), Postives = 71/96 (73.96%), Query Frame = 0
Query: 115 MYRMVSDAVKPRQLGEPGRQKVRNMVKKVQRECWSTPTDALDLVSELKDTPGCFVKWETDDLHRLKHVLWSTGQQQVFARQWGGIVIQDNTCLTNR 210
MYR +++++KP++LG G +KVRNM +KV E W++ DAL+LV+EL + VKWE D + L+ ++W++ +Q + AR +GG+VIQDNTCLTNR
Sbjct: 1 MYRCIAESIKPQKLGPRGARKVRNMSRKVTGELWASSGDALELVAEL-ERGNETVKWELDAENILRSIMWASPEQILLARTYGGVVIQDNTCLTNR 95
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5739.14136.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 3
20 40 60 80 100 120 140 160 180 200 220 240 260 280 Expect = 1.05e-50 / Id = 69.53 Expect = 8.92e-31 / Id = 45.68 Expect = 2.17e-19 / Id = 48.96 Sequence A0A6H5JEJ0_9PHAE A0A6H5K454_9PHAE D7FLF6_ECTSI
back to top
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_L-elsbetiae_contig5739.14136.1 ID=prot_L-elsbetiae_contig5739.14136.1|Name=mRNA_L-elsbetiae_contig5739.14136.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=281bp MGIDRLSKEPGARIKRIKIVCVCAGKSTSTPKVAEVGKQRNTSSKRCGCE FLVRASWPADDVPKLGKVCLTHHPDCTAEPTAVAKKDLVPCDFIEQSFGS NIQGWTLAGVRQFDMYRMVSDAVKPRQLGEPGRQKVRNMVKKVQRECWST PTDALDLVSELKDTPGCFVKWETDDLHRLKHVLWSTGQQQVFARQWGGIV IQDNTCLTNRCGLLLSSCPYAAVGGVSSVVYGWSVRRPSRWPLIWSVRPI HDSICDVVVGVGRLGFVQFFGESSTAAQTIP back to top