mRNA_L-elsbetiae_contig5696.14071.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5696.14071.1
Unique NamemRNA_L-elsbetiae_contig5696.14071.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5696.14071.1 vs. uniprot
Match: A0A6H5KHI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHI3_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 3.700e-128
Identity = 194/216 (89.81%), Postives = 201/216 (93.06%), Query Frame = 2 
Query:    2 WQSIRALIDCSAGDSLASCKGVRSVFLFDHEEVGSSSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAIVRKSFLVSADMAHALHPNYQERHDPALGPKMHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPVLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYKHIKAVLEKFFELDGQLAVDAAPPSSAA 649
            WQSIRALID   GD LASCKGVRSVFLFDHEEVGS+SC GAAGTLLPDCMKRIAKGLAASPSD VMEA+VRKSFLVSADMAHALHPNYQ+RHDPALGPK+HSGMVLKHN NQRYATNAVTAFFFRELGARAGLPTQEFAVKSDS CGSTIGP LSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGY+HIKAVLE FFE+DGQL VD  PP+  A
Sbjct:  149 WQSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCQGAAGTLLPDCMKRIAKGLAASPSDFVMEAVVRKSFLVSADMAHALHPNYQDRHDPALGPKIHSGMVLKHNTNQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSACGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYRHIKAVLENFFEIDGQLVVDGCPPAVVA 364
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BLAST of mRNA_L-elsbetiae_contig5696.14071.1 vs. uniprot
Match: D8LK99_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK99_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 9.170e-116
Identity = 180/194 (92.78%), Postives = 185/194 (95.36%), Query Frame = 2 
Query:    2 WQSIRALIDCSAGDSLASCKGVRSVFLFDHEEVGSSSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAIVRKSFLVSADMAHALHPNYQERHDPALGPKMHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPVLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYKHIKAV 583
            WQSIRALID   GD LASCKGVRSVFLFDHEEVGS+SCHGAAGTLLPDCMKRIAKGLAASPSD VMEA+VRKSFLVSADMAHALHPNYQ+RHDPALGPK+HSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDS CGSTIGP LSALSGIRTVDVGSPQLSMHSIREMMGADDAV GY+HIK V
Sbjct:  237 WQSIRALIDGCEGDGLASCKGVRSVFLFDHEEVGSTSCHGAAGTLLPDCMKRIAKGLAASPSDFVMEAVVRKSFLVSADMAHALHPNYQDRHDPALGPKIHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSACGSTIGPTLSALSGIRTVDVGSPQLSMHSIREMMGADDAVFGYRHIKGV 430
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BLAST of mRNA_L-elsbetiae_contig5696.14071.1 vs. uniprot
Match: A0A7S1XZN9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZN9_9STRA)

HSP 1 Score: 255 bits (651), Expect = 5.020e-74
Identity = 135/211 (63.98%), Postives = 160/211 (75.83%), Query Frame = 2 
Query:    2 WQSIRALIDCSAGDSLASCKGVRSVFLFDHEEVGSSSCHGAAGTLLPDCMKRIAKGLAA-SPSDV-VMEAIVRKSFLVSADMAHALHPNYQERHDPALGPKMHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPVLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYKHIKAVLEKFFELDGQLAVDA 628
            +Q +RAL+D    DSL + KGVR V LFDHEEVGSSS  GA G +LP+ + RI +G+   SP    V+  + RKSF VSADMAHA HPNY ERHDP L P +HSG+V+KHNANQRYAT+AVTA  FRE  A+ G+P QEFAV+SDSGCGSTIGP+ ++L+GIRTVD+GSPQLSMHSIRE+MG DDA  GY  IKA  E F E+D  L VDA
Sbjct:  261 YQGLRALVDTL--DSLGTDKGVRLVALFDHEEVGSSSSTGAGGPILPNSIARITQGMYGDSPLCADVLPRVYRKSFCVSADMAHAQHPNYPERHDPNLNPSIHSGVVIKHNANQRYATSAVTATLFRECCAKGGVPVQEFAVRSDSGCGSTIGPITASLTGIRTVDIGSPQLSMHSIREIMGTDDAYYGYAAIKACFENFNEIDEGLTVDA 469
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BLAST of mRNA_L-elsbetiae_contig5696.14071.1 vs. uniprot
Match: A4S7N7_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7N7_OSTLU)

HSP 1 Score: 247 bits (631), Expect = 5.880e-71
Identity = 124/210 (59.05%), Postives = 153/210 (72.86%), Query Frame = 2 
Query:    2 WQSIRALIDCSAGDSLASCKGVRSVFLFDHEEVGSSSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAIVRKSFLVSADMAHALHPNYQERHDPALGPKMHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPVLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYKHIKAVLEKFFELDGQLAVDAA 631
            + S+ AL++ S  ++LA  +GVR +  FDHEEVGS S  GAAG +  D +KRIA  L+    + + E   R SF VS+DMAHALHPNY +RH+PA  PKMH G+V+KHNANQRYAT+AVTAF FRE+G RAG+P QEF V+SD+GCGSTIGP+ S  +GIRTVDVG+ QLSMHSIRE+ GADD     KH+ AV   F +LD  L VD A
Sbjct:  268 YTSLHALMNASTDEALADARGVRMIMHFDHEEVGSESSSGAAGAMTTDAIKRIAAALSQGSVEGLDERTRRASFCVSSDMAHALHPNYADRHEPAHAPKMHGGLVIKHNANQRYATDAVTAFMFREIGERAGVPVQEFVVRSDTGCGSTIGPIFSTRTGIRTVDVGAAQLSMHSIREVCGADDIDHAVKHLTAVYLHFIDLDRTLIVDGA 477
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BLAST of mRNA_L-elsbetiae_contig5696.14071.1 vs. uniprot
Match: A0A7R9U6Z2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6Z2_9STRA)

HSP 1 Score: 244 bits (624), Expect = 7.630e-70
Identity = 127/215 (59.07%), Postives = 159/215 (73.95%), Query Frame = 2 
Query:    2 WQSIRALIDCSAGDSLASCKGVRSVFLFDHEEVGSSSCHGAAGTLLPDCMKRIAKGLAAS----PSDVVMEAIVRKSFLVSADMAHALHPNYQERHDPALGPKMHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPVLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYKHIKAVLEKFFELDGQLAVDAAP 634
            +QS+RAL+D    D+L     VR++ LFD+EEVGSSS  GA G +LPD +KRI  GL       P+D+ +  ++RKSF VSADMAHA HPNY ERHDPAL PK+H G+VLKHN NQRYA++AVT+  FR+   +  LP QEFA +SD+GCGSTIGP+ +AL+G+RTVD+GSPQLSMHS+REMMGADDA  GY+ +KA    F  +D  L VD AP
Sbjct:  254 YQSLRALVDSL--DTLPEEPNVRAIALFDNEEVGSSSIAGAQGPILPDAIKRIVHGLHGGDQGLPADL-LPRVIRKSFCVSADMAHAHHPNYPERHDPALAPKIHGGIVLKHNPNQRYASSAVTSTIFRQCCLKEDLPFQEFATRSDTGCGSTIGPITAALTGMRTVDIGSPQLSMHSVREMMGADDAEHGYRALKAFFNNFSSVDRTLKVDKAP 465
[Close]
BLAST of mRNA_L-elsbetiae_contig5696.14071.1 vs. uniprot
Match: A0A7S0WT64_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WT64_9CHLO)

HSP 1 Score: 246 bits (628), Expect = 7.860e-70
Identity = 131/233 (56.22%), Postives = 163/233 (69.96%), Query Frame = 2 
Query:    2 WQSIRALID-CSAGDSLASCKGVRSVFLFDHEEVGSSSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAIVRKSFLVSADMAHALHPNYQERHDPALGPKMHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPVLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYKHIKAVLEKFFELDGQLAVDAAPPSSAA*KPTDSGG*NHATYKQ 697
            + S++A++D C+A  SLA   GVR++ LFDHEEVGS S  GA G L+ D + R+A  L+      V E  +R SFLVSADMAHALHPNY ++HDP   PKMH GMVLKHN+NQRYATN+V+A  FRE+G R G+P QEF+V++D+ CGSTIGP+LS+L G RTVDVG  QLSMHSIREM G DD  + YKH  A  E F  LD  + VDA PP++     T SG   H T+ +
Sbjct:  341 YLSLQAMLDTCTAPGSLAEETGVRAIALFDHEEVGSESAQGAGGPLMRDTITRVASALSKGEEGAV-ERAMRSSFLVSADMAHALHPNYADKHDPDHQPKMHEGMVLKHNSNQRYATNSVSAALFREVGHRRGIPCQEFSVRNDTPCGSTIGPILSSLLGCRTVDVGVAQLSMHSIREMCGVDDIGIAYKHFVAFFEDFSALDKHIDVDALPPANII--GTISGTECHHTHSK 570
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BLAST of mRNA_L-elsbetiae_contig5696.14071.1 vs. uniprot
Match: A0A096PAP6_OSTTA (Peptidase M18 n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PAP6_OSTTA)

HSP 1 Score: 241 bits (615), Expect = 8.980e-69
Identity = 121/210 (57.62%), Postives = 147/210 (70.00%), Query Frame = 2 
Query:    2 WQSIRALIDCSAGDSLASCKGVRSVFLFDHEEVGSSSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAIVRKSFLVSADMAHALHPNYQERHDPALGPKMHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPVLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYKHIKAVLEKFFELDGQLAVDAA 631
            + S++AL++ S  D+LA   GVR +  FDHEEVGS S  GAAG +  D +KRIA  L  +  + + E   R SF VS+DMAHALHPNY +RH+PA  PK+H G+V+KHNANQRYAT+AVTAF FRELG R G+P QEF VKSD GCGSTIGP+ S  +GIRTVDVG+ QLSMHSIRE+ G DD     KH  +    F +LD    VD A
Sbjct:  257 YTSLQALLNASTDDALAGASGVRMIMHFDHEEVGSESTSGAAGAMTTDAIKRIAAALNPNAVEGLDERTRRASFCVSSDMAHALHPNYTDRHEPAHTPKLHGGLVIKHNANQRYATDAVTAFMFRELGERVGVPVQEFVVKSDMGCGSTIGPIFSTRTGIRTVDVGAAQLSMHSIREVCGTDDVEHAIKHFTSTFMNFLDLDRTFIVDGA 466
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BLAST of mRNA_L-elsbetiae_contig5696.14071.1 vs. uniprot
Match: A0A0D6R3V7_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R3V7_ARACU)

HSP 1 Score: 240 bits (613), Expect = 1.300e-68
Identity = 118/207 (57.00%), Postives = 153/207 (73.91%), Query Frame = 2 
Query:    8 SIRALIDCSAGDSLASCK-GVRSVFLFDHEEVGSSSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAIVRKSFLVSADMAHALHPNYQERHDPALGPKMHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPVLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYKHIKAVLEKFFELDGQLAVD 625
            S++AL+D +A   L   + GVR V LFDHEEVGS+S  GA   ++ D + R+   ++ S S V +E +++KSFLVSADMAH LHPNY +RH+    PKMH G+V+KHNANQRYATNAVT+F FRE+G    LP Q+F V++D  CGSTIGP+L++  GIRTVD+G+PQLSMHSIREM G DD V  Y+H+KA  E+F +LD Q+ VD
Sbjct:  280 SLKALLDATAAKELLQDETGVRMVALFDHEEVGSNSAQGAGSPVMLDALTRVTSSMSESDSKVSLEKVIQKSFLVSADMAHCLHPNYMDRHEENHQPKMHKGLVIKHNANQRYATNAVTSFIFREIGKMHKLPIQDFVVRNDMPCGSTIGPILASGVGIRTVDIGAPQLSMHSIREMCGVDDVVHSYQHLKAYFEEFTKLDSQIKVD 486
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BLAST of mRNA_L-elsbetiae_contig5696.14071.1 vs. uniprot
Match: A0A3S6N245_9SPER (Zn-dependent exopeptidases superfamily protein n=18 Tax=Cupressaceae TaxID=3367 RepID=A0A3S6N245_9SPER)

HSP 1 Score: 239 bits (611), Expect = 3.170e-68
Identity = 117/207 (56.52%), Postives = 155/207 (74.88%), Query Frame = 2 
Query:    8 SIRALIDCSAGD-SLASCKGVRSVFLFDHEEVGSSSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAIVRKSFLVSADMAHALHPNYQERHDPALGPKMHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPVLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYKHIKAVLEKFFELDGQLAVD 625
            S++AL+D +A + SL    GVR V LFDHEEVGS+S  GA   ++ D   RI   L+A  S V +E ++++SFLVSADMAH LHPNY ++H+    P+MH+G+V+K+NANQRYATNAVT+F FRE+G +  +P Q+F V++D GCGSTIGP+L++  GIRTVDVG+PQLSMHSIREM G DD +  Y+H+KA  E+F  LD Q+ VD
Sbjct:  289 SLKALLDGTASEESLQDETGVRMVALFDHEEVGSNSAQGAGSPVMLDAFSRITSSLSAHGSKVSLEKVIQRSFLVSADMAHCLHPNYMDKHEDNHQPRMHNGLVIKNNANQRYATNAVTSFIFREIGKKHKIPVQDFVVRNDMGCGSTIGPILASGVGIRTVDVGAPQLSMHSIREMCGVDDVIYSYEHLKAYFEEFTNLDSQIKVD 495
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BLAST of mRNA_L-elsbetiae_contig5696.14071.1 vs. uniprot
Match: A0A061SLC2_9CHLO (Aspartyl aminopeptidase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SLC2_9CHLO)

HSP 1 Score: 238 bits (607), Expect = 1.970e-67
Identity = 123/211 (58.29%), Postives = 153/211 (72.51%), Query Frame = 2 
Query:    8 SIRALIDCSAGDSLASCKGVRSVFLFDHEEVGSSSCHGAAGTLLPDCMKRIAKGLAASPSDVVMEAIVRKSFLVSADMAHALHPNYQERHDPALGPKMHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGSTIGPVLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYKHIKAVLEKFFELDGQLAVDA-APP 637
            S+ ALI  +A + L   +GVR++ LFDHEEVGSSS  GA G ++ D ++R+A  L      VV+ A+ R SFLVSADMAH+LHPNY +RHDP   PK H G+V+KHNANQRYATNAV+A  FRE+ AR G+P QEFA++SD  CGSTIGP+L++  G+RTVDVG+PQL+MHSIREMMG DD      H KA  + F +LD  L VD  APP
Sbjct:  292 SLTALIGSTAPEMLEEEEGVRAIALFDHEEVGSSSAQGAGGPVMLDTIQRVATTLGGGEEGVVIRALQR-SFLVSADMAHSLHPNYSDRHDPQHQPKFHEGIVIKHNANQRYATNAVSAGLFREVAARRGIPVQEFAIRSDLACGSTIGPILASGMGVRTVDVGAPQLAMHSIREMMGVDDVSHCVNHFKAFFQDFSKLDASLDVDGIAPP 501
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5696.14071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHI3_9PHAE3.700e-12889.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK99_ECTSI9.170e-11692.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XZN9_9STRA5.020e-7463.98Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A4S7N7_OSTLU5.880e-7159.05Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
A0A7R9U6Z2_9STRA7.630e-7059.07Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S0WT64_9CHLO7.860e-7056.22Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A096PAP6_OSTTA8.980e-6957.62Peptidase M18 n=1 Tax=Ostreococcus tauri TaxID=704... [more]
A0A0D6R3V7_ARACU1.300e-6857.00Uncharacterized protein n=2 Tax=Araucariaceae TaxI... [more]
A0A3S6N245_9SPER3.170e-6856.52Zn-dependent exopeptidases superfamily protein n=1... [more]
A0A061SLC2_9CHLO1.970e-6758.29Aspartyl aminopeptidase n=1 Tax=Tetraselmis sp. GS... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5696contigL-elsbetiae_contig5696:5377..11382 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score274.6
Seed ortholog evalue3e-71
Seed eggNOG ortholog2880.D8LK99
KEGG koko:K01267
Hectar predicted targeting categoryother localisation
EggNOG free text desc.aminopeptidase activity
EggNOG OGsCOG1362@1,KOG2596@2759
EC3.4.11.21
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04131
Ec32 ortholog descriptionPeptidase M18
Ec32 orthologEc-16_002630.2
Exons5
Model size1884
Cds size504
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816607.5793872-UTR-L-elsbetiae_contig5696:5376..66081622816607.5793872-UTR-L-elsbetiae_contig5696:5376..6608Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5696 5377..6608 -
1691683681.1242588-UTR-L-elsbetiae_contig5696:5376..66081691683681.1242588-UTR-L-elsbetiae_contig5696:5376..6608Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5696 5377..6608 -
1622816607.6487756-UTR-L-elsbetiae_contig5696:11234..113821622816607.6487756-UTR-L-elsbetiae_contig5696:11234..11382Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5696 11235..11382 -
1691683681.1920826-UTR-L-elsbetiae_contig5696:11234..113821691683681.1920826-UTR-L-elsbetiae_contig5696:11234..11382Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5696 11235..11382 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816607.5916033-CDS-L-elsbetiae_contig5696:6608..66831622816607.5916033-CDS-L-elsbetiae_contig5696:6608..6683Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5696 6609..6683 -
1691683681.1388392-CDS-L-elsbetiae_contig5696:6608..66831691683681.1388392-CDS-L-elsbetiae_contig5696:6608..6683Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5696 6609..6683 -
1622816607.6026473-CDS-L-elsbetiae_contig5696:8002..81611622816607.6026473-CDS-L-elsbetiae_contig5696:8002..8161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5696 8003..8161 -
1691683681.149338-CDS-L-elsbetiae_contig5696:8002..81611691683681.149338-CDS-L-elsbetiae_contig5696:8002..8161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5696 8003..8161 -
1622816607.6170292-CDS-L-elsbetiae_contig5696:9012..92111622816607.6170292-CDS-L-elsbetiae_contig5696:9012..9211Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5696 9013..9211 -
1691683681.16064-CDS-L-elsbetiae_contig5696:9012..92111691683681.16064-CDS-L-elsbetiae_contig5696:9012..9211Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5696 9013..9211 -
1622816607.6269226-CDS-L-elsbetiae_contig5696:10087..101501622816607.6269226-CDS-L-elsbetiae_contig5696:10087..10150Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5696 10088..10150 -
1691683681.173323-CDS-L-elsbetiae_contig5696:10087..101501691683681.173323-CDS-L-elsbetiae_contig5696:10087..10150Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5696 10088..10150 -
1622816607.637481-CDS-L-elsbetiae_contig5696:11226..112341622816607.637481-CDS-L-elsbetiae_contig5696:11226..11234Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5696 11227..11234 -
1691683681.1832032-CDS-L-elsbetiae_contig5696:11226..112341691683681.1832032-CDS-L-elsbetiae_contig5696:11226..11234Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5696 11227..11234 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5696.14071.1prot_L-elsbetiae_contig5696.14071.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5696 6609..11234 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5696.14071.1

>prot_L-elsbetiae_contig5696.14071.1 ID=prot_L-elsbetiae_contig5696.14071.1|Name=mRNA_L-elsbetiae_contig5696.14071.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=168bp
MKRIAKGLAASPSDVVMEAIVRKSFLVSADMAHALHPNYQERHDPALGPK
MHSGMVLKHNANQRYATNAVTAFFFRELGARAGLPTQEFAVKSDSGCGST
IGPVLSALSGIRTVDVGSPQLSMHSIREMMGADDAVLGYKHIKAVLEKFF
ELDGQLAVDAAPPSSAA*
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mRNA from alignment at L-elsbetiae_contig5696:5377..11382-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5696.14071.1 ID=mRNA_L-elsbetiae_contig5696.14071.1|Name=mRNA_L-elsbetiae_contig5696.14071.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6006bp|location=Sequence derived from alignment at L-elsbetiae_contig5696:5377..11382- (Laminarionema elsbetiae ELsaHSoW15)
CTGGCAGTCGATTCGCGCCTTGATCGACTGCAGCGCCGGGGACAGCCTGG
CCTCCTGCAAGGGGGTGCGCTCGGTTTTCCTTTTCGACCACGAGGAGGTG
GGCAGCAGCTCTTGCCACGGGGCCGCCGGCACCCTACTGCCTGACTGCAT
GAAGAGGTACCGTGAAGTGTTCGAGTGATCGCACAGGGCGGGTCCGGTGA
ACTTTTAGAGAGCCCGATTACCGTAGGTGACACAAGATACCACACCCCCT
GGACACCTTTTCAAAGATCGATTCCTCCCCAGCAAGAAGAGTCCCAGTGC
CGAAAGGGCTGGCGTTGGAAAGATCTAATCGAGGGCTGTCCGAAAACGTG
TCGTACGGTGCTGGCTGGCACCTTCTTCGTTATACGGAGTAATGGAGCTC
TGGAATTTGGCCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTAGTCCG
TAACGAAGAGGGGTGCCGACACCAAACGACACGTTTTTCGGACAGACAGC
TATCGACGAGATCTTTCCAACGCCACCCTTTCCTTTTCGCGACTGACACT
TTTTTTTGTCGTGGAGTAATCGAGCTTTGAAAGTCGATCCAAGGGGGGGG
TGTGCGATGACTCGAACACTTACGGTAGGCCAGGCGCGAAGGCAGGGGCA
CAGGCAAATCATTTAGGTACCGTATTCATGCTGCACAAGATAACACACCC
CCTGGACCGATTTTCAAAGCCTCAAGTACTCCACAGCGACAAGAGTGTTG
AAGTCCCGAAAAGGGCGGCGTTGGAAAGATCTCATCCAGAGCCTGTTGTA
GCTGTCCGAAAACGTGTCGTTTGGTGTTAGGAATCATACTCGTTGCGGAG
TAACCGAGCTTTGAAAACCGGTCCAGGGTCCAGGGACTCTGTGTCGTCTT
GTGTCGAATGCCGTAGGTAGGTTATGGGTGGCGACACTTTTGCGAGCAGC
TGCGGCTCGAAAGGACGGCGTGAACGCCCGCTTTGTGCAGACAAGCAAGC
ACCAGCATTGCCCTTGTACCGGACGGTTTTCCGCACAGCAGTACAGCAGG
TTTTTATGCATCGTTTACCTCTCTCGCTGCCAATGTGAACGGCCTATGTA
CGTACCTGCTGTACACCTCCGAGGGTGATTGTTTTTTTTTTACGCAAATC
CCCCACACTCCCTTCTTGCTCGTGTGTGCGCTCGCTTTCCGTCTCTTGCT
GCGGGGTAATTCCGCCGATTATTCCGCCGCAGGATCGCGAAGGGTCTAGC
GGCATCCCCTTCGGACGTTGTGATGGAAGCCATCGTGCGCAAGAGGTAAC
TACACTCTTTTGTTTGTTTTTTTCCTCTCCCATTATTGGCATTTACATAC
TTCTGTGTATTTCGCTCGCTGCAACCGTCCGACTCCAGCCCGTGCATGCG
GTTGCTTGCCGCCTCCCCCCGGGAAGCCTCGCCAACAAGCACTCAGTCGG
TCGGCAGGTTTACAGCACAATAAACGGGCACACGTGCACATGATCCCCGA
CTTTTATATTATATTTCCCCCGCCCGCCTCAATACGTATCTATGCAACCC
CCCATGAACCCGTCAAATCAGTTGTTGATTCATTGGCGCTCTACAAAAGC
TGTTGTTGTTGTTGTCTTCACATTCAAAACCGTTCCGAGCTCTCTATCTA
TCCAGGATGTGCCTCAATGTGTCCGTAGTAAACCAACAACACTGACGCAG
TCGATTCCCGTGGTCGCAGGGTAACTTACCCTGAAAAAGTCTACAGTATA
CCGGAACAAAGAAGGAAAATAAAGAAAATGGACCCGAAGGGCTCCACAAA
GCACAAAACACGCCTGAACACTTGTTGGCCGACCTCGCAAATCTTTGCAG
GGGAGATGTTGAACTCTTCTGATATTTTAGGTCTGTTTTTCTGCCCGCTT
CGCCAAATATTACGTCACAACTGTATGGAATACCGTTTGAACCCCATATC
GAGTCCTTTGCTCTAGTGTGGGGTAGGTTCCATCTTTGATTCATTGTTTA
TTTTTAAGAAACGAAAAGATCAGACACACACTTGTAGTTTTTTACTCACC
GCTCTATAAATGCACATACGCAACCAACCAACCAACCAACCAACCAAGAA
CCCTTCCTTCTAGATACATGTTGACTTCTTGCTGCCGCCGCCGCCGCCGC
CACCGCCGGTCCCGCCCGCAGCTTCTTGGTCTCCGCCGACATGGCCCACG
CGCTCCACCCGAACTACCAGGAGAGGCACGACCCGGCCCTGGGCCCGAAG
ATGCACTCCGGCATGGTGCTCAAGCACAACGCCAACCAGCGCTACGCGAC
CAACGCGGTGACGGCCTTCTTCTTCAGGGAGCTGGGCGCGCGCGCGGGCC
TGCCAACGCAGGAGTTCGCGGTGAGGTTCGGAGGCATGTCGGGGGCGAGG
CGGGCGAGCCCGCACCTCGAGGGACGGGCGGCGGGGGGAGGCGGGGGGCA
GAGACCAATTTATCTCGATGATCATACATACTTCGAAGTATATTATGTGT
GATAATTTATTTTCCGTGCTTTTTTTGTCCCCCCCCCCCCTCTACGGGGC
GTCAGCGGTCTATGCACGTCGAAACTGAGGGAACAAATCGTTTTCAGGCG
GGGGGTGCTGTTGCAGATAGGATGTTTCCTTCCGCGCGCCCCCCCCCCAT
GTGGCTAGAATGGTGCTTTTTCGAAACCGGCGTTTTCCGCTGAATTTTCT
GGGGGTTCTGTGTGTTTGTTTGTTTGTGGGGGGGAGGGGGTCTTCCTGTT
TTTCAGACAAACGAGTGACTCGAGGTACACGTACGTACGGGAAGCATGGC
GACCAGCCACGCCCGCGCCCTCTTCAGCGTTTGTTTATTGTTTGGTGGAA
CAGCAGCACGGGAGCGCTCTGTACCTGCCCCGCTGCTGTGCCGCAACCCT
AAGAAGGCTGTTTGCTGGTTGTAGGGCTCGCTCTACATACAATAAATAGA
CGTTTCTCTTGGCTCGGCGGACACAATGGAGCTCTCCAAGCGGCTCAAAC
CAAAAACTTTGGGGTGTTTTGTTGTGTATGCCAGGTTGCGGGGTGGATGC
ACAGGGGAAACGACGGTCGGTGTCTTGAGTGAAGTGTGGCTGACTTTCAC
CGCTGCGTTGGTTTGCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
TGGACTGTGGCTGACTTTCACCGCTGCGTTGGTTTGCGCTGCTGCTGCTG
CTGCTGCTGCTCCTGCTGCAGGTGAAGAGTGACTCTGGGTGCGGGAGCAC
GATCGGACCGGTCCTCTCCGCCCTGTCGGGCATCCGGACGGTGGACGTGG
GGTCGCCGCAGCTGTCCATGCATTCCATCCGAGAGATGATGGGGGCCGAC
GATGCCGTGCTCGGGTACAAACACATCAAGGTGGGTGTGTTTTTTTTGGT
GCGACTGACTAGACTCTGCTGGTGTACTTTGTTATTTAGGTTCCCTCCAA
TATTAGTGTTTAACGAAGCATACATCACGGACAGCGAGCAGGGCGAGAGC
CGTTTACGTCCGAGCTCCGTTGACATTTTTTTTTTTTTCCCAGAAGAGAA
GAAAATCGTGCATGACCCACCCGCTGCTGTGAGCAAAGAGCGCCTCGGGG
GGCTCACTCGCTGTCCGTCGGCGGGGGGTGCCGCAGTATCTGGTAGCACG
CGCGCGCCCCCTCCCCCTATTCCGCGCCTCGCGCAAACAATGTATCGCCA
CTGGAAGCATTGCCTTAGGGACAGACAGACAGACAGACAGACAGATCGGC
GTAGCGCTGCCCTTTCGATCTTTCGGCGGAGTAGCCCCCTCGGCTGGCGG
GGGGGCTCCAGAGCGATCTTCGCCGACGGCACCCCCATGTTGTCCGCGAG
GAAAGATTTTCCGAGCGAACAACAACGGCGGCGCATGTTCGGAAGCAGAT
TTGACGTGCAGATATTTAATAGGAAAGGATGCCGGAACGTACGTAAGCTA
CACACCCGGACGCGAATCCAATTACCGTAATCATGCAGGTTATCGCACCC
CCGTGTTGGCGTTTTTCTATAGCGTATTTCTCCACAACCAGGAGGGTACC
ACTGCCGAAAAGGGTGGTTTTCGAAACGTCTTGTCGGGGACTTTCCGGAG
AGAGGTATCAGTTAGTGTTCGCACCCTCCTGGTTGTGGAGAAATACGCTA
CACGTAGAAAAACGCTTACACGGGGGTGCGATGTGGAGAAATACGCGACA
TGTAGAAAAACGCTAACACGGGGGTGCGATAACCCGCATGATTACGGTAA
CTCATTACGAATGTGAAGAGGGTCAAACGTCTCCGACAAGACCGTAGTGG
GTTTGTATCCCTTCCGAGGGCGACCTCCACACGGCCGCTACATGTAGTGC
AACAGGAAACCGCTGTGAAATGGAAGCCGTTGCCGTTACCCCGGCCATAG
AAGGAACACGAGCAATAACTTGTATCTCGGTGGTCCTTGCGGCGCGGCGA
TCGTTTTTTTTGTTTTTTCGTGGTCACCAGAGTGTTCGACATAGAGGAGG
GTGCCAAGAGTCACCCCTGAATGGCTCGTTGCCCCCCGATGTCTAGCGCG
CTCCGCCTCGAAAGGAATGCGGTGGTGAAATGGCTAATTGACTCTGACCG
GCCAGCAACTAAGGAGCACCCCCCCCCCCCGCTGTCCCCCAATCTCGCGG
ACATTTCGTGCACGTTTATGTGGTGGATCGCTACGTATACCCGCCCCAGG
CGGTGCTGGAGAAGTTCTTCGAGCTCGACGGGCAGCTGGCGGTGGACGCG
GCTCCTCCGTCCTCCGCCGCGTAGAAACCAACCGACAGCGGGGGGTGAAA
CCACGCAACCTACAAGCAGTGAGGGTGTGTGCTGCTGTGTACTGCTTGAA
GCAGTCATCCGTGATATCATATACTACGAAGTTGGAGTACGTACGTACGT
ACGTACGAAGTCGAGCCTGTAATTTTGGCACACGCGTGAGACGCGATGCA
CGCTCGTACGGTATGTAGGGGAGAGGGTTGCCGCAGCAGGGAAAACAACC
AATCCTGGAGAAATATCTTCAGTCAAGAGGCGGTGGGTTTCCAGGGAGGC
GTGGAGAGTGGAGAGGCGGAAGGGGCATAGGTGCCGTTTCACGCGCAGGT
AGGTAGACTATTTAGAGGTGTTTTTTCTTACGGCCGTCATGCTGCAGCGC
CCGTCCGTACGAAGACATCATCGGTCAACGTTGGCAGTAGCCGGGAAGAA
TCGCGTGCCAACAAGCTTGTTCGCGGGGCAGCAGCAGGCAACAGCGAGCG
AGCACCTTCTCCCCTGTCCAATGCACACACGAGCCATGTAGCCCCCCCAC
CTCTTTGTTGGGGATAGAAGGGGTTCCTGCAATAGAGCCAGCCCCCAATT
CTCAAAAAGAGCTGTTGGGGGCAGCGCGGGGGGGTATTTATCTAGGAAAT
AGAGTGAAAAATCCACCACGGCCGCGTTTTCAGAATGGGGCGGCCTGCCG
CAGGAAAAGCCTATAGGGTTCGGGGGGTTGGCGCGGCGGTCGGTTGTTAG
GTTTGAGGGCTGGAAACCCTCCGTGCTTTCCCTCCCCTCCGCGTTGGTCG
TCTACATACACACCCACCTCCAAGCAACGCTGATGGTAGATATTTACTTG
AGTTGGCACGCGTGTTTTTTTCCCGCGCTTGCCAACATGTTGGCCGATGC
CTCACACAAACATACGGCCGCCGGTTGTGTTGGGTATGCCGGACGACACC
GAACAGGTGCCGTGAAACCGTGGGTGTCACGGGGGTGGGCGACGGTGGAG
CCTTTTCTTTGTTGCTCATCATACATATGTAGACCTGGTACGACGCCTGC
TCCGAATAGACGGACAGGCTTGTAGTCGTCATAGATGTCACTGTGCTCTC
CCCGAAAGAAAATGCACCCAGAGTTCCAAAAGGCAAAACGTGCGCATGAA
CACATGAACACACAGCAGCGGGGCACACATGCACACACGAATTTCCGGGT
TGATTTCATGCCACGGAGTACATAGATAGCTTCGTTCGTTCGGTCTTTCA
GCGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5696:5377..11382-

>mRNA_L-elsbetiae_contig5696.14071.1 ID=mRNA_L-elsbetiae_contig5696.14071.1|Name=mRNA_L-elsbetiae_contig5696.14071.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1008bp|location=Sequence derived from alignment at L-elsbetiae_contig5696:5377..11382- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGAGATGAAGAGGATCGCGAAGGGTCTAGCGGCATCCCCTTCGGAC
GTTGTGATGGAAGCCATCGTGCGCAAGAGGATCGCGAAGGGTCTAGCGGC
ATCCCCTTCGGACGTTGTGATGGAAGCCATCGTGCGCAAGAGCTTCTTGG
TCTCCGCCGACATGGCCCACGCGCTCCACCCGAACTACCAGGAGAGGCAC
GACCCGGCCCTGGGCCCGAAGATGCACTCCGGCATGGTGCTCAAGCACAA
CGCCAACCAGCGCTACGCGACCAACGCGGTGACGGCCTTCTTCTTCAGGG
AGCTGGGCGCGCGCGCGGGCCTGCCAACGCAGGAGTTCGCGCTTCTTGGT
CTCCGCCGACATGGCCCACGCGCTCCACCCGAACTACCAGGAGAGGCACG
ACCCGGCCCTGGGCCCGAAGATGCACTCCGGCATGGTGCTCAAGCACAAC
GCCAACCAGCGCTACGCGACCAACGCGGTGACGGCCTTCTTCTTCAGGGA
GCTGGGCGCGCGCGCGGGCCTGCCAACGCAGGAGTTCGCGGTGAAGAGTG
ACTCTGGGTGCGGGAGCACGATCGGACCGGTCCTCTCCGCCCTGTCGGGC
ATCCGGACGGTGGACGTGGGGTCGCCGCAGCTGTCCATGCATTCCATCCG
AGAGATGATGGGGGCCGACGATGCCGTGCTCGGGTACAAACACATCAAGG
TGAAGAGTGACTCTGGGTGCGGGAGCACGATCGGACCGGTCCTCTCCGCC
CTGTCGGGCATCCGGACGGTGGACGTGGGGTCGCCGCAGCTGTCCATGCA
TTCCATCCGAGAGATGATGGGGGCCGACGATGCCGTGCTCGGGTACAAAC
ACATCAAGGCGGTGCTGGAGAAGTTCTTCGAGCTCGACGGGCAGCTGGCG
GTGGACGCGGCTCCTCCGTCCTCCGCCGCGTAGGCGGTGCTGGAGAAGTT
CTTCGAGCTCGACGGGCAGCTGGCGGTGGACGCGGCTCCTCCGTCCTCCG
CCGCGTAG
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