mRNA_L-elsbetiae_contig5694.14068.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5694.14068.1
Unique NamemRNA_L-elsbetiae_contig5694.14068.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5694.14068.1 vs. uniprot
Match: D7G169_ECTSI (Pyridoxal kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G169_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 2.280e-102
Identity = 156/174 (89.66%), Postives = 160/174 (91.95%), Query Frame = 1 
Query:   43 MSSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQGAELSSLLQXXXXXXLLGGYTHMLTGYVGSPSFLQAVLDVHRRLKAANPDLLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTIVTEEDAVRACMVLHS 564
            M+SGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQG ELS LLQ      LL GYTH+LTGYVGSPSFL AVLDVHRRLK ANP LLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTI+TEEDAVRAC  LH+
Sbjct:    1 MASGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQGEELSRLLQGLESNNLLRGYTHVLTGYVGSPSFLHAVLDVHRRLKEANPALLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTILTEEDAVRACTALHA 174
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BLAST of mRNA_L-elsbetiae_contig5694.14068.1 vs. uniprot
Match: C1E6L1_MICCC (Pyridoxal kinase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E6L1_MICCC)

HSP 1 Score: 232 bits (591), Expect = 3.290e-73
Identity = 111/172 (64.53%), Postives = 139/172 (80.81%), Query Frame = 1 
Query:   46 SSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQGAELSSLLQXXXXXXLLGGYTHMLTGYVGSPSFLQAVLDVHRRLKAANPDLLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTIVTEEDAVRACMVLH 561
            SS GR L+IQSHVV GYVGNKC+VFPLQL GFDVDP+ SVQFSNHTGY  ++G V+ G +L SL++      LL GYTH+LTGY+GS S L+ V  + R+L+  NP+L+++CDPVLGD+GRLYVPAE   IYREE++PLAT++TPNQFEAELL+G+TI +EEDA+ AC  LH
Sbjct:    5 SSTGRALTIQSHVVSGYVGNKCAVFPLQLHGFDVDPILSVQFSNHTGYGCWKGEVMTGEQLQSLVEGLEQNGLLEGYTHLLTGYIGSASMLRTVARLVRKLRTYNPNLVYVCDPVLGDNGRLYVPAELTTIYREEIVPLATLLTPNQFEAELLTGMTIGSEEDALAACASLH 176
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BLAST of mRNA_L-elsbetiae_contig5694.14068.1 vs. uniprot
Match: A0A1D6MVV4_MAIZE (Pyridoxal kinase n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6MVV4_MAIZE)

HSP 1 Score: 228 bits (581), Expect = 3.760e-73
Identity = 109/182 (59.89%), Postives = 139/182 (76.37%), Query Frame = 1 
Query:   19 PGVCSACRMSSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQGAELSSLLQXXXXXXLLGGYTHMLTGYVGSPSFLQAVLDVHRRLKAANPDLLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTIVTEEDAVRACMVLHS 564
            P + S    S  GRVLSIQSH V+GYVGNK +VFPLQLLGFDVDP+NSVQFSNHTGY  F G VL G +L  L++      LL  YTH+LTGY+GS SFL  VL V  +L++ NPDL+++CDPVLGD+G+LYVP E + +Y+++V+P+A+M+TPNQFE ELL+G+ I +EED + AC  LHS
Sbjct:    4 PPILSVALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPTFRGQVLNGKQLWDLIEGLEENQLLH-YTHLLTGYIGSVSFLDTVLQVVEKLRSVNPDLVYVCDPVLGDEGKLYVPQELISVYQQKVVPVASMLTPNQFEVELLTGLRITSEEDGLTACNTLHS 184
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BLAST of mRNA_L-elsbetiae_contig5694.14068.1 vs. uniprot
Match: D7TSS8_VITVI (Pyridoxal kinase n=13 Tax=Vitis TaxID=3603 RepID=D7TSS8_VITVI)

HSP 1 Score: 232 bits (591), Expect = 8.320e-73
Identity = 114/186 (61.29%), Postives = 142/186 (76.34%), Query Frame = 1 
Query:    7 LHSPPGVCSACRMSSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQGAELSSLLQXXXXXXLLGGYTHMLTGYVGSPSFLQAVLDVHRRLKAANPDLLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTIVTEEDAVRACMVLHS 564
            L + P + S    S  GRVLSIQSH V+GYVGNK +VFPLQLLG+DVDP+NSVQFSNHTGY  F+G VL G +L  L+       LL  YTH+LTGY+GS SFL AVL+V  +L++ NP L ++CDPV+GDDG+LYVP E V IYRE+V+P+A+M+TPNQFEAELL+G  IVTE+D   AC +LH+
Sbjct:   33 LMAAPPILSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGYPTFKGQVLNGQQLGDLIAGLEENNLLY-YTHLLTGYIGSVSFLNAVLEVVHKLRSVNPKLTYVCDPVMGDDGKLYVPTELVAIYREKVVPVASMLTPNQFEAELLTGFRIVTEKDGREACNILHA 217
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BLAST of mRNA_L-elsbetiae_contig5694.14068.1 vs. uniprot
Match: A0A7N0V4K5_KALFE (Pyridoxal kinase n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0V4K5_KALFE)

HSP 1 Score: 230 bits (586), Expect = 1.470e-72
Identity = 110/185 (59.46%), Postives = 143/185 (77.30%), Query Frame = 1 
Query:   10 HSPPGVCSACRMSSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQGAELSSLLQXXXXXXLLGGYTHMLTGYVGSPSFLQAVLDVHRRLKAANPDLLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTIVTEEDAVRACMVLHS 564
             + P + S    S  GRVLSIQSH V+GYVGNK +VFPLQLLG+DVDP+NSVQFSNHTGY  F+G VL G +L  L++      LL  YTH+LTGY+GS SFL  VL+V ++L++ NP L+++CDPV+GD+G+LYVP E V +YRE+V+P+A+M+TPNQFEAE L+G  IV+E+D + AC VLHS
Sbjct:    3 RATPPILSLVLPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGYPSFKGQVLNGQQLWDLIEGLEANDLLC-YTHLLTGYIGSVSFLDVVLEVVKKLRSVNPKLIYVCDPVMGDEGKLYVPPELVSVYREKVVPVASMLTPNQFEAEQLTGFRIVSEQDGLEACKVLHS 186
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BLAST of mRNA_L-elsbetiae_contig5694.14068.1 vs. uniprot
Match: A0A3B6MLB2_WHEAT (Pyridoxal kinase n=2 Tax=Triticum TaxID=4564 RepID=A0A3B6MLB2_WHEAT)

HSP 1 Score: 229 bits (584), Expect = 1.930e-72
Identity = 110/187 (58.82%), Postives = 142/187 (75.94%), Query Frame = 1 
Query:    4 PLHSPPGVCSACRMSSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQGAELSSLLQXXXXXXLLGGYTHMLTGYVGSPSFLQAVLDVHRRLKAANPDLLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTIVTEEDAVRACMVLHS 564
            P  + P + S    S  GRVLSIQSH V+GYVGNK +VFPLQLLGFDVDP+NSVQFSNHTGY  F G VL G +L  L++      LL  YTH+LTGY+GS SFL  VL V  +L++ NPDL+++CDPVLGD+G+LYVP + V +Y+E+V+P+A+M+TPNQFE ELL+G+ I +E+D ++AC  LHS
Sbjct:   48 PAMARPPILSVALPSDTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPKFRGQVLNGNQLWDLIEGLEENELLH-YTHLLTGYIGSVSFLNTVLQVVDKLRSVNPDLIYVCDPVLGDEGKLYVPQDLVSVYQEKVVPVASMLTPNQFEVELLTGLRITSEQDGLKACNTLHS 233
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BLAST of mRNA_L-elsbetiae_contig5694.14068.1 vs. uniprot
Match: UPI001FB15CE6 (pyridoxal kinase-like n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB15CE6)

HSP 1 Score: 230 bits (586), Expect = 2.060e-72
Identity = 113/182 (62.09%), Postives = 141/182 (77.47%), Query Frame = 1 
Query:   19 PGVCSACRMSSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQGAELSSLLQXXXXXXLLGGYTHMLTGYVGSPSFLQAVLDVHRRLKAANPDLLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTIVTEEDAVRACMVLHS 564
            P + S    S  GRVLSIQSH V+GYVGNK +VFPLQLLGFDVDP+NSVQFSNHTGY  F+G VL G EL  LL+      LL  YTH+LTGY+GS SFL  VL+V  +L++ NP L ++CDPVLGD+G+LYVP E V +YRE+V+P+A+M+TPNQFEAELL+G+ IV+E+D   AC +LH+
Sbjct:    3 PPILSLALPSQTGRVLSIQSHTVQGYVGNKSAVFPLQLLGFDVDPINSVQFSNHTGYPTFKGQVLNGQELWELLEGLEANDLLF-YTHLLTGYIGSVSFLTTVLEVVNKLRSINPKLTYVCDPVLGDEGKLYVPMELVSVYREKVVPVASMLTPNQFEAELLTGLRIVSEDDGREACNILHT 183
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BLAST of mRNA_L-elsbetiae_contig5694.14068.1 vs. uniprot
Match: A0A7S0E9S0_9EUKA (Pyridoxal kinase (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E9S0_9EUKA)

HSP 1 Score: 225 bits (574), Expect = 4.080e-72
Identity = 109/168 (64.88%), Postives = 135/168 (80.36%), Query Frame = 1 
Query:   46 SSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQGAELSSLLQXXXXXXLLGGYTHMLTGYVGSPSFLQAVLDVHRRLKAANPDLLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTIVTEEDAVRAC 549
            +S GRVLSIQSH V GYVGNK +VFPLQLLGF+VDP+NSVQFS HTGY G+ G V+QG +L+ L++      LL GY+HMLTGY+GS SFL+AVLD  R ++A NP++L+ CDPV+GD+G LYVP E VDIYR+EVLPLA+++TPNQFEAE L+   I +E DAV AC
Sbjct:   35 TSTGRVLSIQSHTVHGYVGNKSAVFPLQLLGFEVDPINSVQFSTHTGYPGWRGEVMQGQQLTELVEGLRSSGLLRGYSHMLTGYIGSASFLRAVLDTVRAVRAENPEMLYYCDPVMGDNGSLYVPKELVDIYRDEVLPLASVLTPNQFEAEQLTQRPIRSEADAVAAC 202
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BLAST of mRNA_L-elsbetiae_contig5694.14068.1 vs. uniprot
Match: A0A7S2SQK9_9STRA (Pyridoxal kinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQK9_9STRA)

HSP 1 Score: 229 bits (584), Expect = 8.950e-72
Identity = 114/168 (67.86%), Postives = 133/168 (79.17%), Query Frame = 1 
Query:   58 RVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQGAELSSLLQXXXXXXLLGGYTHMLTGYVGSPSFLQAVLDVHRRLKAANPDLLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTIVTEEDAVRACMVLH 561
            RVLSIQSHVV GYVGNK +VFPLQL GFDVD VNSVQFSNHTGY  F G VL G +L  L++      LL GY+H+LTGY+GS SFL+AV  V+RRLK  NP L+++CDPVLGD+G+LYVP E V IYREE+LPLAT++TPNQFE E L G  +VTEEDAV AC+ LH
Sbjct:   19 RVLSIQSHVVHGYVGNKSAVFPLQLHGFDVDFVNSVQFSNHTGYKTFTGEVLNGEQLEKLVEGLASNGLLEGYSHLLTGYIGSVSFLRAVCSVYRRLKEQNPGLVYVCDPVLGDNGKLYVPQELVQIYREEMLPLATILTPNQFECEQLLGQPMVTEEDAVFACLWLH 186
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BLAST of mRNA_L-elsbetiae_contig5694.14068.1 vs. uniprot
Match: A0A6P5EWP2_ANACO (Pyridoxal kinase n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5EWP2_ANACO)

HSP 1 Score: 228 bits (581), Expect = 1.100e-71
Identity = 108/184 (58.70%), Postives = 142/184 (77.17%), Query Frame = 1 
Query:   13 SPPGVCSACRMSSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVDPVNSVQFSNHTGYAGFEGTVLQGAELSSLLQXXXXXXLLGGYTHMLTGYVGSPSFLQAVLDVHRRLKAANPDLLFICDPVLGDDGRLYVPAENVDIYREEVLPLATMITPNQFEAELLSGVTIVTEEDAVRACMVLHS 564
            +PP + S    S  GRVLSIQSH V+GYVGNK +VFPLQLLG+DVDP+NSVQFSNHTGY  F G VL G +L  L++      LL  YTH+LTGY+GS SFL  +L V  RL++ NP L+++CDPV+GD+G+LYVP E V ++RE+V+P+A+M+TPNQFEAELL+G+ I +E+D + AC +LH+
Sbjct:   33 APPPILSLALPSETGRVLSIQSHTVQGYVGNKSAVFPLQLLGYDVDPINSVQFSNHTGYPSFRGQVLDGEQLWDLIEGLAANDLLF-YTHLLTGYIGSVSFLNTILKVVERLRSINPALIYVCDPVMGDEGKLYVPQELVSVHREKVVPVASMLTPNQFEAELLTGLRITSEQDGLAACNILHA 215
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5694.14068.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G169_ECTSI2.280e-10289.66Pyridoxal kinase n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
C1E6L1_MICCC3.290e-7364.53Pyridoxal kinase n=1 Tax=Micromonas commoda (strai... [more]
A0A1D6MVV4_MAIZE3.760e-7359.89Pyridoxal kinase n=1 Tax=Zea mays TaxID=4577 RepID... [more]
D7TSS8_VITVI8.320e-7361.29Pyridoxal kinase n=13 Tax=Vitis TaxID=3603 RepID=D... [more]
A0A7N0V4K5_KALFE1.470e-7259.46Pyridoxal kinase n=2 Tax=Kalanchoe fedtschenkoi Ta... [more]
A0A3B6MLB2_WHEAT1.930e-7258.82Pyridoxal kinase n=2 Tax=Triticum TaxID=4564 RepID... [more]
UPI001FB15CE62.060e-7262.09pyridoxal kinase-like n=2 Tax=Impatiens glandulife... [more]
A0A7S0E9S0_9EUKA4.080e-7264.88Pyridoxal kinase (Fragment) n=1 Tax=Phaeocystis an... [more]
A0A7S2SQK9_9STRA8.950e-7267.86Pyridoxal kinase n=1 Tax=Rhizochromulina marina Ta... [more]
A0A6P5EWP2_ANACO1.100e-7158.70Pyridoxal kinase n=1 Tax=Ananas comosus TaxID=4615... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5694contigL-elsbetiae_contig5694:8229..10352 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score313.9
Seed ortholog evalue5e-83
Seed eggNOG ortholog2880.D7G169
Preferred namePDXK
KEGG rclassRC00002,RC00017
KEGG koko:K00868,ko:K02145
KEGG TC3.A.2.2
KEGG ReactionR00174,R01909,R02493
KEGG Pathwayko00190,ko00750,ko01100,ko04145,ko04150,ko04721,ko04966,ko05110,ko05120,ko05323,map00190,map00750,map01100,map04145,map04150,map04721,map04966,map05110,map05120,map05323
KEGG ModuleM00160
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000278,GO:0000281,GO:0000282,GO:0000287,GO:0000910,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006970,GO:0006972,GO:0007049,GO:0007154,GO:0007163,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0008283,GO:0008478,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009267,GO:0009314,GO:0009443,GO:0009605,GO:0009628,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009888,GO:0009987,GO:0009991,GO:0010015,GO:0010033,GO:0010053,GO:0010054,GO:0010165,GO:0010212,GO:0010243,GO:0010941,GO:0012505,GO:0014070,GO:0014075,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017085,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019842,GO:0019954,GO:0022402,GO:0022622,GO:0030010,GO:0030141,GO:0030154,GO:0030170,GO:0030554,GO:0030587,GO:0030955,GO:0031152,GO:0031402,GO:0031403,GO:0031410,GO:0031420,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032094,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032570,GO:0032940,GO:0033554,GO:0033993,GO:0034284,GO:0034641,GO:0034774,GO:0035580,GO:0035639,GO:0036094,GO:0036230,GO:0042119,GO:0042221,GO:0042364,GO:0042493,GO:0042538,GO:0042581,GO:0042594,GO:0042802,GO:0042803,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043094,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044764,GO:0045055,GO:0045321,GO:0046184,GO:0046483,GO:0046872,GO:0046903,GO:0046914,GO:0046983,GO:0048037,GO:0048364,GO:0048519,GO:0048523,GO:0048545,GO:0048731,GO:0048856,GO:0048869,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051301,GO:0051703,GO:0051704,GO:0051716,GO:0060205,GO:0060548,GO:0061640,GO:0065007,GO:0070013,GO:0070279,GO:0070280,GO:0070887,GO:0071310,GO:0071322,GO:0071326,GO:0071496,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0090558,GO:0090627,GO:0090702,GO:0097159,GO:0097367,GO:0097708,GO:0098630,GO:0098743,GO:0099120,GO:0099402,GO:0099503,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1901654,GO:1901698,GO:1901700,GO:1901701,GO:1903047,GO:1905392
EggNOG free text desc.pyridoxal 5'-phosphate salvage
EggNOG OGsCOG2240@1,KOG2599@2759
Ec32 ortholog descriptionPyridoxamine kinase
Ec32 orthologEc-02_001230.1
EC2.7.1.35,3.6.3.14
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons5
Model size566
Cds size564
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5694.14068.1prot_L-elsbetiae_contig5694.14068.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5694 8229..10350 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816607.4478023-CDS-L-elsbetiae_contig5694:8228..82961622816607.4478023-CDS-L-elsbetiae_contig5694:8228..8296Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 8229..8296 +
1691683681.0414188-CDS-L-elsbetiae_contig5694:8228..82961691683681.0414188-CDS-L-elsbetiae_contig5694:8228..8296Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 8229..8296 +
1622816607.459331-CDS-L-elsbetiae_contig5694:8556..86721622816607.459331-CDS-L-elsbetiae_contig5694:8556..8672Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 8557..8672 +
1691683681.0564685-CDS-L-elsbetiae_contig5694:8556..86721691683681.0564685-CDS-L-elsbetiae_contig5694:8556..8672Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 8557..8672 +
1622816607.4699829-CDS-L-elsbetiae_contig5694:9037..91441622816607.4699829-CDS-L-elsbetiae_contig5694:9037..9144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 9038..9144 +
1691683681.0651286-CDS-L-elsbetiae_contig5694:9037..91441691683681.0651286-CDS-L-elsbetiae_contig5694:9037..9144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 9038..9144 +
1622816607.4818263-CDS-L-elsbetiae_contig5694:9532..96281622816607.4818263-CDS-L-elsbetiae_contig5694:9532..9628Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 9533..9628 +
1691683681.0761697-CDS-L-elsbetiae_contig5694:9532..96281691683681.0761697-CDS-L-elsbetiae_contig5694:9532..9628Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 9533..9628 +
1622816607.491924-CDS-L-elsbetiae_contig5694:10173..103501622816607.491924-CDS-L-elsbetiae_contig5694:10173..10350Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 10174..10350 +
1691683681.0883405-CDS-L-elsbetiae_contig5694:10173..103501691683681.0883405-CDS-L-elsbetiae_contig5694:10173..10350Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5694 10174..10350 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5694.14068.1

>prot_L-elsbetiae_contig5694.14068.1 ID=prot_L-elsbetiae_contig5694.14068.1|Name=mRNA_L-elsbetiae_contig5694.14068.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp
APLHSPPGVCSACRMSSGGRVLSIQSHVVRGYVGNKCSVFPLQLLGFDVD
PVNSVQFSNHTGYAGFEGTVLQGAELSSLLQGLESNSLLGGYTHMLTGYV
GSPSFLQAVLDVHRRLKAANPDLLFICDPVLGDDGRLYVPAENVDIYREE
VLPLATMITPNQFEAELLSGVTIVTEEDAVRACMVLHS
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mRNA from alignment at L-elsbetiae_contig5694:8229..10352+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5694.14068.1 ID=mRNA_L-elsbetiae_contig5694.14068.1|Name=mRNA_L-elsbetiae_contig5694.14068.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2124bp|location=Sequence derived from alignment at L-elsbetiae_contig5694:8229..10352+ (Laminarionema elsbetiae ELsaHSoW15)
GCGCCCCTTCACTCGCCACCTGGAGTGTGCAGCGCGTGCAGGATGTCCTC
TGGAGGAAGAGTGCTGAGGTGAGCGCGTCCGGGCTTATTGGTGGTCTGCT
TGCTGCTGCATGTGAGAACTCTGTGTGTTGATGAGTCCGTCATGAAACAG
CAGTCCGTACATGGGTAAATGGTCGAACATGTAGCGTCGACATCAGATCA
GGCAGACGGGCTGCTGGTTGACCACAAAGCCCGCAGCCGCTCTCCGAAAA
TCACTACCAATAGTTCACATTGCGCTGCAACCCCCACCCACCCCCTCTTC
AATACCGGCCGTGGTTCTGTGCCACCAGCATTCAGAGCCATGTCGTGCGA
GGGTACGTCGGGAACAAGTGCTCCGTGTTCCCCCTGCAGCTGCTAGGGTT
CGATGTCGACCCTGTCAACTCTGTCCAGTTTTCGAACCATACAGGTAAGG
ACATGAACGACATTCTTGTCGGTACAGAGATGCACACGCAAGGCGCACTT
AATTGAATTGCACGATATTTTATGTTGAAAGCCCCGCCGTTGCGGGTGTA
CCTCGAAGGTGGGCAGTGGGCAGGTACTCGTGGTACACTCTCCACTACGC
TCCACTCCGCTCTCTCCGTTTTGCAGGTACATATTCGCCCGATGACCAAT
AAGTAACGAAGTGAAGGTGATGTTGGCTGCGCAAAGAAAAATCATGGGGT
CCGCGACAGCCGGCGAACACGAAAAACGAGACCCGGACACCTGGTGCCCT
CGGCCTCTCTCTTGGTCGTCTATTGATCGTCTTCTAATACTCACTTGTAC
CCCACACAGGTTATGCCGGATTTGAGGGGACGGTTCTGCAAGGGGCAGAG
CTGTCAAGCCTTCTGCAAGGATTGGAATCGAACAGCCTGCTCGGGGGCTA
CACTCACATGCTCACGGTAAGCTATATACATGCGGCGCGTTCTCGACCGC
TGCTCTCCTCTGTTGATTATCTACATCTGCACCTCCGTGTGTTGGCCAAA
AGAATAGTCTAAATGCCACACCTCTTCTCTCTCGATGCTGCACCAAGATT
ACCACGCAAGTGCTGCCCCGGGGGTGATTGATGAGAGCTTGAGCCATGCG
GCGGCGGTCTCGCCCCCACCACCCCCGCGAGGTGATGCATTGCTGTTGCG
CGTTGTCACAGAACATTGCCTGCCCGTGCCGGCATCCGTCGCTCGTGGAC
ACGTCCACTTTACATACATACATACGGCGCTACAGCAGTCAGTAGTAGTC
CTCTCCGCCCTCGTCTGACGAAACACCGCCTTTTCGCCCTTGTTTTCCAC
CCAGGGCTACGTCGGATCCCCATCATTCTTGCAGGCCGTGCTCGACGTCC
ACCGGAGACTCAAGGCCGCGAACCCGGACCTGCTCTTCATATGCGACCCG
GTAGGCTGCTACATATGTAAAGAGTAAAAGCTAAAACAACGTGTAGAGCG
TCGACAAAGCCAACCACGTCGGGGGGCTTGGGGGGCAGGGGCATCGACGG
GTTGGTTCGGACGGAAGCAGTAGTGATGTTCGTCTTGCACAAGCTTCCCG
CGTTGGGTGCTGGCTTCGGGCCTTGAGGTTGCCCGCTTGCGAGAGCAGCC
CCCATGCAGAGTACGGAATACATGACGCGTAGCGAGAGGGCAGAGCTGTG
CGGTTGGTTTAACCCGGCAGGGGCCTGGGCGGAAACGGGAGGTAAACGGG
GGCAGCCAACCGGCACCACGACATGCTTGTGGCGAAAGGGGCACACAGCA
GTACACGCCCTCTGTATCTCCACCGTCAATCTTCGGGCCTGTTTTTTGTG
TCCCTTCTCTTTTGTTTTTCCTTTCAAGGAGGAGAGGGGAGACCGGCGAC
TCCCGACAATTTCCCCCCGATCACCGCCTCTCGCAAGCACCGCACGGTAG
AACTGATGGTATAAACGTGCTGGTCTTTTCGCCGCTGCGGCGCAGGTGCT
CGGAGACGACGGCAGGCTGTACGTGCCGGCGGAGAACGTCGACATCTACA
GGGAGGAGGTGCTGCCGCTAGCCACGATGATCACGCCGAACCAGTTCGAG
GCGGAGCTTCTGTCGGGCGTGACGATAGTGACGGAGGAGGATGCCGTCCG
TGCTTGCATGGTCCTGCACTCGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5694:8229..10352+

>mRNA_L-elsbetiae_contig5694.14068.1 ID=mRNA_L-elsbetiae_contig5694.14068.1|Name=mRNA_L-elsbetiae_contig5694.14068.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig5694:8229..10352+ (Laminarionema elsbetiae ELsaHSoW15)
GCGCCCCTTCACTCGCCACCTGGAGTGTGCAGCGCGTGCAGGATGTCCTC
TGGAGGAAGAGTGCTGAGGCGCCCCTTCACTCGCCACCTGGAGTGTGCAG
CGCGTGCAGGATGTCCTCTGGAGGAAGAGTGCTGAGCATTCAGAGCCATG
TCGTGCGAGGGTACGTCGGGAACAAGTGCTCCGTGTTCCCCCTGCAGCTG
CTAGGGTTCGATGTCGACCCTGTCAACTCTGTCCAGTTTTCGAACCATAC
AGCATTCAGAGCCATGTCGTGCGAGGGTACGTCGGGAACAAGTGCTCCGT
GTTCCCCCTGCAGCTGCTAGGGTTCGATGTCGACCCTGTCAACTCTGTCC
AGTTTTCGAACCATACAGGTTATGCCGGATTTGAGGGGACGGTTCTGCAA
GGGGCAGAGCTGTCAAGCCTTCTGCAAGGATTGGAATCGAACAGCCTGCT
CGGGGGCTACACTCACATGCTCACGGTTATGCCGGATTTGAGGGGACGGT
TCTGCAAGGGGCAGAGCTGTCAAGCCTTCTGCAAGGATTGGAATCGAACA
GCCTGCTCGGGGGCTACACTCACATGCTCACGGGCTACGTCGGATCCCCA
TCATTCTTGCAGGCCGTGCTCGACGTCCACCGGAGACTCAAGGCCGCGAA
CCCGGACCTGCTCTTCATATGCGACCCGGGCTACGTCGGATCCCCATCAT
TCTTGCAGGCCGTGCTCGACGTCCACCGGAGACTCAAGGCCGCGAACCCG
GACCTGCTCTTCATATGCGACCCGGTGCTCGGAGACGACGGCAGGCTGTA
CGTGCCGGCGGAGAACGTCGACATCTACAGGGAGGAGGTGCTGCCGCTAG
CCACGATGATCACGCCGAACCAGTTCGAGGCGGAGCTTCTGTCGGGCGTG
ACGATAGTGACGGAGGAGGATGCCGTCCGTGCTTGCATGGTCCTGCACTC
GGTGCTCGGAGACGACGGCAGGCTGTACGTGCCGGCGGAGAACGTCGACA
TCTACAGGGAGGAGGTGCTGCCGCTAGCCACGATGATCACGCCGAACCAG
TTCGAGGCGGAGCTTCTGTCGGGCGTGACGATAGTGACGGAGGAGGATGC
CGTCCGTGCTTGCATGGTCCTGCACTCG
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