mRNA_L-elsbetiae_contig5694.14069.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5694.14069.1 vs. uniprot
Match: A0A6H5KAQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ0_9PHAE) HSP 1 Score: 162 bits (409), Expect = 5.660e-45 Identity = 108/237 (45.57%), Postives = 147/237 (62.03%), Query Frame = 1 Query: 7 VPIAKLQHKRPGIENRYFRPLILHGEGLLRFGEKQIGSKMEPFQNYGT-ERKTHKNNFSNRGHNSRATRPQRRALGI------MVKRGRHKTTGGTNGRPPKVAKGANAAVARSQMLINKQLD-------VLEMEKAAVAAQLQEVEDTKASIAKREEQLARDMANWEALQQKKEQQEYDRVTKAHEAAMSKLPALKLEFINDSLDTLKPKTGEVTSRHQSRMILMLYFDLVKGGSS 675 +P+ + QH+ G + R+F I LLRFG+ ++GSK+EP N T + + NF + A + A + M KRGR TGGT+GRPPK KGANAA AR+ +NK LD V +AA+ A+ ++V+ KAS+A+ E+LARD+A LQQ+ E++E DRV KA EAA KLP L L+F+ DS+ +L+PKT E+T+ QSR+ILMLYFDLVKGGSS Sbjct: 1 MPVEQSQHEVNGAKRRHFMAAIFKRANLLRFGKTKLGSKIEPDANCSTCQHGAYNANFFFEFEPAVAEQLAVHARHLANPAPTMTKRGRRVLTGGTSGRPPKAIKGANAAAARNAKAMNKLLDDKEKREAVTAAAEAALVAKEEDVKAMKASVARDREKLARDIARSAVLQQQCERREQDRVNKAAEAATYKLPPLALKFVEDSVQSLRPKTDELTTLQQSRIILMLYFDLVKGGSS 237
BLAST of mRNA_L-elsbetiae_contig5694.14069.1 vs. uniprot
Match: A0A6H5K4F5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4F5_9PHAE) HSP 1 Score: 147 bits (370), Expect = 8.200e-40 Identity = 87/154 (56.49%), Postives = 111/154 (72.08%), Query Frame = 1 Query: 235 MVKRGRHKTTGGTNGRPPKVAKGANAAVARSQMLINKQLDVLEMEKAAVAAQ-------LQEVEDTKASIAKREEQLARDMANWEALQQKKEQQEYDRVTKAHEAAMSKLPALKLEFINDSLDTLKPKTGEVTSRHQSRMILMLYFDLVKGGSS 675 M KRGR TGGT+GRPPK KG NAA AR+ INK LD +E +AA AA V+ +AS+A+ E+LARD+A + LQQ++EQ+E DRV+KA EAA SKLP L L+F+ DS+ +L+P+TGE+T+ QSR+ILMLYFDLVKGGSS Sbjct: 1 MTKRGRRVPTGGTSGRPPKAIKGVNAAAARNAKAINKLLDDMEKREAATAAAEXXXXXXXXXVKAMEASVARDREKLARDIARSDVLQQQREQREQDRVSKAAEAATSKLPPLALKFVEDSVQSLRPETGELTTLQQSRIILMLYFDLVKGGSS 154
BLAST of mRNA_L-elsbetiae_contig5694.14069.1 vs. uniprot
Match: A0A6H5KB03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB03_9PHAE) HSP 1 Score: 141 bits (355), Expect = 1.530e-38 Identity = 86/155 (55.48%), Postives = 113/155 (72.90%), Query Frame = 1 Query: 235 MVKRGRHKTTGGTNGRPPKVAKGANAAVARSQMLINKQLDVLEMEKA-------AVAAQLQEVEDTKASIAKREEQLARDMANWEALQQKKEQQEYDRVTKAHEAAMSKLPALKL-EFINDSLDTLKPKTGEVTSRHQSRMILMLYFDLVKGGSS 675 M +RGR TGGT+GRPPK KGANAA AR+ +NK LD +E +A A+AA+ +EV+ KAS+ + E+LARD+A + LQQ++E++E DRV+KA EAA SK P L L F+ DS+ +L+PKTGE+T+ QSRMILML+FDLVKGGSS Sbjct: 1 MTERGRRVPTGGTSGRPPKAIKGANAAAARNAKAMNKLLDDMEKREAGVAAAETALAAKEEEVKAMKASVPRDREKLARDIARSDLLQQQRERREQDRVSKAAEAATSKRPPLALMTFVEDSVQSLRPKTGELTTLQQSRMILMLFFDLVKGGSS 155
BLAST of mRNA_L-elsbetiae_contig5694.14069.1 vs. uniprot
Match: A0A6H5JBX5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBX5_9PHAE) HSP 1 Score: 127 bits (319), Expect = 4.620e-32 Identity = 96/228 (42.11%), Postives = 127/228 (55.70%), Query Frame = 1 Query: 7 VPIAKLQHKRPGIENRYFRPLILHGEGLLRFGEKQIGSKMEPFQNYGT---ERKTHKNNFSNRGHNSRATRPQRRA--LGIMVKRGRHKTTGGTNGRPPKVAKGANAAVARSQMLINKQLDVLEMEKAAVAAQLQEVEDTKASIAKREEQLARDMANWEALQQKKEQQEYDRVTKAHEAAMSKLPALKLEFINDSLDTLKPKTGEVTSRHQSRMILMLYFDLVKGGSS 675 +PI + QH+ G + R+F LLRFG+ ++GSK+EP N T +R+ K F A + A M KRGR TGGT+GRPPK KGANAA AR+ +NK LD +MEK + + + E ++ + EA +E DRV KA EAA KLP L L+F+ DS+ +L+PKT E+T+ QSR+ILMLYFDLVKGGSS Sbjct: 1 MPIEQSQHEVNGAKRRHFMAATFKRAYLLRFGKNKLGSKIEPDANCSTWRVQRQKKKTEFEPAVAEQLAVHGRHLANPAPTMTKRGRRVPTGGTSGRPPKAIKGANAAAARNAKAMNKLLD--DMEKRGGHRLCRSSSRGQGRRREGHEGVS-GQGSGEARAGHRE----DRVNKAAEAATYKLPPLALKFVEDSVQSLRPKTDELTTLQQSRIILMLYFDLVKGGSS 221
BLAST of mRNA_L-elsbetiae_contig5694.14069.1 vs. uniprot
Match: A0A6H5K1C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1C6_9PHAE) HSP 1 Score: 106 bits (264), Expect = 1.030e-25 Identity = 65/120 (54.17%), Postives = 88/120 (73.33%), Query Frame = 1 Query: 337 INKQLDVLEMEKA-------AVAAQLQEVEDTKASIAKREEQLARDMANWEALQQKKEQQEYDRVTKAHEAAMSKLPALKLEFINDSLDTLKPKTGEVTSRHQSRMILMLYFDLVKGGSS 675 +NK LD E KA A+AA+ + V+ KAS+A+ E+L RD+A + LQQ++E++E DRV+KA EAA SKLP L L+F+ DS+ +L+ KTGE+T+ QSRMIL+LYFDLVKGGSS Sbjct: 1 MNKLLDDTEKRKASTAAAEAALAAKEEGVKAMKASVARDREKLPRDIARSDVLQQQRERREQDRVSKAAEAATSKLPPLALKFVEDSVQSLRLKTGELTTLQQSRMILLLYFDLVKGGSS 120
BLAST of mRNA_L-elsbetiae_contig5694.14069.1 vs. uniprot
Match: A0A6H5KGL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL0_9PHAE) HSP 1 Score: 112 bits (279), Expect = 1.620e-25 Identity = 62/101 (61.39%), Postives = 82/101 (81.19%), Query Frame = 1 Query: 373 AAVAAQLQEVEDTKASIAKREEQLARDMANWEALQQKKEQQEYDRVTKAHEAAMSKLPALKLEFINDSLDTLKPKTGEVTSRHQSRMILMLYFDLVKGGSS 675 AA+AA+ +EV+ KAS+A+ E+LARD+A + LQQ++E++E DRV+KA EAA SKLP L L+F+ DS+ L+PKTGE+T+ QSRMILMLYFDL KGGSS Sbjct: 13 AALAAKEEEVKVMKASVARDREKLARDIARSDVLQQQRERREQDRVSKAAEAATSKLPPLALKFVEDSVQWLRPKTGELTTLQQSRMILMLYFDLAKGGSS 113
BLAST of mRNA_L-elsbetiae_contig5694.14069.1 vs. uniprot
Match: A0A6H5K8G5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G5_9PHAE) HSP 1 Score: 109 bits (272), Expect = 4.080e-25 Identity = 66/120 (55.00%), Postives = 88/120 (73.33%), Query Frame = 1 Query: 337 INKQLDVLEMEKAAVAAQ-------LQEVEDTKASIAKREEQLARDMANWEALQQKKEQQEYDRVTKAHEAAMSKLPALKLEFINDSLDTLKPKTGEVTSRHQSRMILMLYFDLVKGGSS 675 +NK LD +E AA AA EV+ KAS+A+ +LARD+A + LQQ++E++E DRV+KA EAA+SKLP L L+F+ DS+ +L+PKTGE+T+ QSR+ILMLYFDLVKGGSS Sbjct: 1 MNKLLDDIEKRVAATAAAEAAIXXXXXEVKAMKASVARDRGKLARDIARSDVLQQQRERREQDRVSKAAEAAISKLPPLALKFVEDSVQSLRPKTGELTTLQQSRIILMLYFDLVKGGSS 120
BLAST of mRNA_L-elsbetiae_contig5694.14069.1 vs. uniprot
Match: A0A6H5JF55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF55_9PHAE) HSP 1 Score: 105 bits (263), Expect = 4.650e-25 Identity = 56/88 (63.64%), Postives = 74/88 (84.09%), Query Frame = 1 Query: 412 KASIAKREEQLARDMANWEALQQKKEQQEYDRVTKAHEAAMSKLPALKLEFINDSLDTLKPKTGEVTSRHQSRMILMLYFDLVKGGSS 675 KAS+A+ E+LARD+A + LQQ++E++E DRV+KA EAA SKLP L L+F+ DS+ +L+PKTGE+T+ QSR+ILMLYFDLVKGGSS Sbjct: 2 KASVARDREKLARDIARSDVLQQQRERREQDRVSKAAEAATSKLPPLALKFVEDSVHSLRPKTGELTTLQQSRIILMLYFDLVKGGSS 89
BLAST of mRNA_L-elsbetiae_contig5694.14069.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE) HSP 1 Score: 100 bits (249), Expect = 9.080e-21 Identity = 52/80 (65.00%), Postives = 68/80 (85.00%), Query Frame = 1 Query: 436 EQLARDMANWEALQQKKEQQEYDRVTKAHEAAMSKLPALKLEFINDSLDTLKPKTGEVTSRHQSRMILMLYFDLVKGGSS 675 E+LARD+A + LQQ++E++E DRV+KA EAA SKLP L L+F+ DS+ +L+PKTGE+T+ QSR+ILMLYFDLVKGGSS Sbjct: 41 EKLARDIAKSDVLQQQRERREQDRVSKAAEAATSKLPPLALKFVEDSVQSLRPKTGELTTLQQSRIILMLYFDLVKGGSS 120
BLAST of mRNA_L-elsbetiae_contig5694.14069.1 vs. uniprot
Match: A0A6H5JG34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG34_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 3.960e-14 Identity = 59/147 (40.14%), Postives = 70/147 (47.62%), Query Frame = 1 Query: 235 MVKRGRHKTTGGTNGRPPKVAKGANAAVARSQMLINKQLDVLEMEKAAVAAQLQEVEDTKASIAKREEQLARDMANWEALQQKKEQQEYDRVTKAHEAAMSKLPALKLEFINDSLDTLKPKTGEVTSRHQSRMILMLYFDLVKGGSS 675 M KRGR TGGT+GRPPKV KGANAA AR+ +NK LD + A SKLP L +F+ DS+ +L+P TGE+T+ QSRMILMLYFDLVKG SS Sbjct: 1 MTKRGRRVPTGGTSGRPPKVIKGANAASARNAKAVNKVLDDIXXXXXXXXXXXXXXXXXXXXXX---------------------------XXXXXXXATSKLPPLAPKFVEDSVQSLRPTTGELTTLQQSRMILMLYFDLVKGCSS 120 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5694.14069.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5694.14069.1 >prot_L-elsbetiae_contig5694.14069.1 ID=prot_L-elsbetiae_contig5694.14069.1|Name=mRNA_L-elsbetiae_contig5694.14069.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=226bp EIVPIAKLQHKRPGIENRYFRPLILHGEGLLRFGEKQIGSKMEPFQNYGTback to top mRNA from alignment at L-elsbetiae_contig5694:10893..11872+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5694.14069.1 ID=mRNA_L-elsbetiae_contig5694.14069.1|Name=mRNA_L-elsbetiae_contig5694.14069.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=980bp|location=Sequence derived from alignment at L-elsbetiae_contig5694:10893..11872+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5694:10893..11872+ >mRNA_L-elsbetiae_contig5694.14069.1 ID=mRNA_L-elsbetiae_contig5694.14069.1|Name=mRNA_L-elsbetiae_contig5694.14069.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1356bp|location=Sequence derived from alignment at L-elsbetiae_contig5694:10893..11872+ (Laminarionema elsbetiae ELsaHSoW15)back to top |