mRNA_L-elsbetiae_contig564.13981.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig564.13981.1 vs. uniprot
Match: A0A6H5JC88_9PHAE (PhoLip_ATPase_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC88_9PHAE) HSP 1 Score: 147 bits (371), Expect = 2.270e-39 Identity = 75/80 (93.75%), Postives = 79/80 (98.75%), Query Frame = 2 Query: 2 QIIGSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDKEETAINIAVACQLLWTEAKMHRTVINLKGTGQSETDEIKEALE 241 QI+GSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDKEETAINIAVACQLLWTEA+MHRTVI LKGTG+SET+EIKEALE Sbjct: 929 QILGSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDKEETAINIAVACQLLWTEARMHRTVIKLKGTGKSETEEIKEALE 1008
BLAST of mRNA_L-elsbetiae_contig564.13981.1 vs. uniprot
Match: D7G0C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C1_ECTSI) HSP 1 Score: 134 bits (336), Expect = 1.200e-34 Identity = 73/96 (76.04%), Postives = 79/96 (82.29%), Query Frame = 2 Query: 2 QIIGSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDK----------------EETAINIAVACQLLWTEAKMHRTVINLKGTGQSETDEIKEALE 241 +I+GSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDK EETAINIAVACQLLWTEA+M+RTVI LKGTG+SET+EIKEALE Sbjct: 947 EILGSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDKSSAQPYPTVADCVSGREETAINIAVACQLLWTEARMYRTVIKLKGTGESETEEIKEALE 1042
BLAST of mRNA_L-elsbetiae_contig564.13981.1 vs. uniprot
Match: A0A836CFX1_9STRA (Phospholipid-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX1_9STRA) HSP 1 Score: 104 bits (260), Expect = 2.180e-24 Identity = 49/70 (70.00%), Postives = 60/70 (85.71%), Query Frame = 2 Query: 2 QIIGSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDKEETAINIAVACQLLWTEAKMHRTVINLKGTGQS 211 +++GS+AIEDKLQ GV GA++ +MAAGIK+WVLTGDKEETAINI VACQL+W+E +M R VINLKG S Sbjct: 771 ELLGSTAIEDKLQEGVPGAIASIMAAGIKVWVLTGDKEETAINIGVACQLIWSEERMDRLVINLKGANGS 840
BLAST of mRNA_L-elsbetiae_contig564.13981.1 vs. uniprot
Match: A0A6H5KPG5_9PHAE (P-type phospholipid transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG5_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 1.440e-18 Identity = 45/84 (53.57%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 2 QIIGSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDKEETAINIAVACQLLWTEAKMHRTVINL----KGTGQSETDEIKEALE 241 Q++G +AIEDKLQ GV V L A +K+W+LTGDKEETAINI VACQLL E +M R +IN+ + TG + +E+K+ LE Sbjct: 843 QLLGCTAIEDKLQDGVGACVDALQRARVKVWILTGDKEETAINIGVACQLLGPEEQMERIIINMDPQARHTGCQDVEEVKDRLE 926
BLAST of mRNA_L-elsbetiae_contig564.13981.1 vs. uniprot
Match: D7FU18_ECTSI (Phospholipid-transporting ATPase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU18_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 2.380e-17 Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 2 Query: 2 QIIGSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDKEETAINIAVACQLLWTEAKMHRTVINLKG-TGQSETDEIKEALE 241 +++G +AIEDKLQ GV V L A +K+W+LTGDKEETAINI VACQLL E +M R ++N+ TG + +E+K+ LE Sbjct: 892 RLLGCTAIEDKLQDGVGTCVDALQRARVKVWMLTGDKEETAINIGVACQLLGPEEQMERIIVNMDPQTGCQDVEEVKDRLE 972
BLAST of mRNA_L-elsbetiae_contig564.13981.1 vs. uniprot
Match: D7FU89_ECTSI (Phospholipid-transporting ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU89_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 6.000e-17 Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 2 Query: 5 IIGSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDKEETAINIAVACQLLWTEAKMHRTVINLK 196 +IG +AIEDKLQ GV + ++ G+ +WV+TGDKEETAINI VACQLLW E +M R +IN K Sbjct: 740 LIGGTAIEDKLQTGVGETIEKMVRGGMVVWVITGDKEETAINIGVACQLLWAEDRMDRCIINTK 803
BLAST of mRNA_L-elsbetiae_contig564.13981.1 vs. uniprot
Match: K8YX07_NANGC (Aminophospholipid-transporting P-type atpase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YX07_NANGC) HSP 1 Score: 79.0 bits (193), Expect = 9.350e-17 Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 2 QIIGSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDKEETAINIAVACQLLWTEAKMHRTVIN 190 +++G++AIEDKLQ GV + DL AGIK+W+LTGDKEETA+NI VAC LL KM R IN Sbjct: 9 ELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISIN 71
BLAST of mRNA_L-elsbetiae_contig564.13981.1 vs. uniprot
Match: A0A7S4DCU9_HETAK (Phospholipid-transporting ATPase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCU9_HETAK) HSP 1 Score: 82.0 bits (201), Expect = 2.030e-16 Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 2 Query: 2 QIIGSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDKEETAINIAVACQLLW-TEAKMHRTVINL 193 +++G +AIEDKLQ GV +SDL AGI IWVLTGDKEETAINIAVACQL+ +E M R VINL Sbjct: 83 ELLGVTAIEDKLQDGVGQTISDLSKAGIAIWVLTGDKEETAINIAVACQLILPSEEHMRRIVINL 147
BLAST of mRNA_L-elsbetiae_contig564.13981.1 vs. uniprot
Match: D0MZV4_PHYIT (Phospholipid-transporting ATPase n=13 Tax=Phytophthora TaxID=4783 RepID=D0MZV4_PHYIT) HSP 1 Score: 81.6 bits (200), Expect = 2.860e-16 Identity = 43/71 (60.56%), Postives = 54/71 (76.06%), Query Frame = 2 Query: 2 QIIGSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDKEETAINIAVACQLLWTEAKMHRTVINLKGTGQSE 214 +++G++AIEDKLQ+GV A+++L AGIKIWVLTGDKEETAINI ACQL+ E K+ VIN K SE Sbjct: 669 ELLGATAIEDKLQSGVPDAIANLACAGIKIWVLTGDKEETAINIGFACQLVTNEMKLF--VINSKNAPTSE 737
BLAST of mRNA_L-elsbetiae_contig564.13981.1 vs. uniprot
Match: A0A485LS81_9STRA (Phospholipid-transporting ATPase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LS81_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.860e-16 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 2 QIIGSSAIEDKLQAGVAGAVSDLMAAGIKIWVLTGDKEETAINIAVACQLLWTEAKMHRTVINLKGTGQSETDEIKEALE 241 +++G++AIEDKLQ GV A++ L A IK+W+LTGDKEETAINI ACQLL E ++ I + G + DEI+E LE Sbjct: 686 EVLGATAIEDKLQEGVPDAIAKLREASIKVWMLTGDKEETAINIGFACQLLHLEMEL----IVISGNNHEDIDEIRETLE 761 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig564.13981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig564.13981.1 >prot_L-elsbetiae_contig564.13981.1 ID=prot_L-elsbetiae_contig564.13981.1|Name=mRNA_L-elsbetiae_contig564.13981.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp SDNRVERDRGQASSRRRRRRVRPHGGGHQDLGLDRRQGGNRDQHCGGLPAback to top mRNA from alignment at L-elsbetiae_contig564:6440..7677+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig564.13981.1 ID=mRNA_L-elsbetiae_contig564.13981.1|Name=mRNA_L-elsbetiae_contig564.13981.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1238bp|location=Sequence derived from alignment at L-elsbetiae_contig564:6440..7677+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig564:6440..7677+ >mRNA_L-elsbetiae_contig564.13981.1 ID=mRNA_L-elsbetiae_contig564.13981.1|Name=mRNA_L-elsbetiae_contig564.13981.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=492bp|location=Sequence derived from alignment at L-elsbetiae_contig564:6440..7677+ (Laminarionema elsbetiae ELsaHSoW15)back to top |