prot_L-elsbetiae_contig5637.13979.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5637.13979.1
Unique Nameprot_L-elsbetiae_contig5637.13979.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length171
Homology
BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 3.150e-53
Identity = 88/94 (93.62%), Postives = 91/94 (96.81%), Query Frame = 0
Query:    1 MRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRRLEEG 94
            MRSGC IDGVRYKGMFVR+EG GGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVA VEIPKAF+RRLE+G
Sbjct:  282 MRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAAVEIPKAFMRRLEDG 375          
BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A6H5J790_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J790_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 8.770e-52
Identity = 105/158 (66.46%), Postives = 114/158 (72.15%), Query Frame = 0
Query:    1 MRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRRLEEGTAGHSLGAGGG------GGSGRRMAGGPVPGTGKLRGAKAGGM-----SPPRQGDASSRGEGSD 147
            MRSGC IDGVRYKGMFVR+EG GGKGREGRNAWLTIECTEGK      ICKYLCLTVNRLART YGPFSLGKVRAGGVA VEIPKAF+RRLE+G      G+ GG      G SGRR+  GP PG G  R  +AG M     S P  G++S+ G G D
Sbjct:    1 MRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGK------ICKYLCLTVNRLARTGYGPFSLGKVRAGGVAAVEIPKAFMRRLEDGG-----GSPGGAXXXXXGTSGRRL--GPGPGNGMRRELEAGRMRVSEVSSPGGGNSSTVGGGRD 145          
BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A835ZDT5_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT5_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.200e-21
Identity = 47/91 (51.65%), Postives = 65/91 (71.43%), Query Frame = 0
Query:    1 MRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRRL 91
            M+ GC I+GV YKGM V ++    +G E  N WL + C EGKN QIR++C++L LTVNRL RT +GPF LGK+ +GGVA V + + FL+++
Sbjct:  204 MQRGCVIEGVHYKGMVVNID----RG-EKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLHEQFLKQV 289          
BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A7X4D014_9PROT (Pseudouridine synthase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7X4D014_9PROT)

HSP 1 Score: 85.9 bits (211), Expect = 4.490e-17
Identity = 45/90 (50.00%), Postives = 58/90 (64.44%), Query Frame = 0
Query:    1 MRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRR 90
            +  G  +DGVRY  +  RL+   G+   G NAWLT+   EGKNR+IRK+C +L LT NRL RT YGPF LGK+ AG V    +P+  LR+
Sbjct:  159 LADGVTVDGVRYGPVQARLDRPPGQSG-GANAWLTMSIREGKNREIRKLCAHLGLTANRLIRTAYGPFQLGKLAAGAVE--RVPERVLRQ 245          
BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A2E6X8W3_9PROT (Pseudouridine synthase n=1 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E6X8W3_9PROT)

HSP 1 Score: 83.2 bits (204), Expect = 1.150e-16
Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 0
Query:    1 MRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLR 89
            +  G  ++G++Y  +   L+ +G + +   NAWLT+  TEGKNR++RK+  +L LTVNRL RT YGPF LGK+R GG+   EI    +R
Sbjct:  107 LAKGLTVNGIKYGPIKATLDNIGEESKA--NAWLTLALTEGKNREVRKVLAHLGLTVNRLIRTTYGPFQLGKIRRGGIE--EIKNKVMR 191          
BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A6B1HIP4_9PROT (Pseudouridine synthase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6B1HIP4_9PROT)

HSP 1 Score: 83.6 bits (205), Expect = 3.360e-16
Identity = 45/90 (50.00%), Postives = 57/90 (63.33%), Query Frame = 0
Query:    1 MRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRR 90
            +  G  +DGVRY  +  RL+    +   G NAWLT+   EGKNR+IRK+C +L LT NRL RT YGPF LGK+ AG V    IP+  LR+
Sbjct:  160 LAEGVTVDGVRYGPVQARLDRQPERSG-GANAWLTMSIREGKNREIRKLCAHLGLTANRLIRTAYGPFQLGKLAAGAVE--RIPERVLRQ 246          
BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: UPI000EA92B65 (rRNA pseudouridine synthase n=1 Tax=Tsuneonella amylolytica TaxID=2338327 RepID=UPI000EA92B65)

HSP 1 Score: 81.3 bits (199), Expect = 1.770e-15
Identity = 41/91 (45.05%), Postives = 58/91 (63.74%), Query Frame = 0
Query:    3 SGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRRLEE 93
             G  IDGVRY  +   LEG    G+ GRN W+ +  TEGKNR++R++ ++L L V+RL R  YGPF+LG +  G  A VEI +A + +L +
Sbjct:  169 EGVEIDGVRYGKIEADLEGAARSGKGGRNQWIVMTLTEGKNREVRRVLEHLGLQVSRLLRVGYGPFNLGDLPRG--AAVEIAQAQVEKLRK 257          
BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A7C5SFA6_9PROT (Pseudouridine synthase n=1 Tax=Thermopetrobacter sp. TaxID=2268141 RepID=A0A7C5SFA6_9PROT)

HSP 1 Score: 80.5 bits (197), Expect = 2.870e-15
Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    1 MRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRRL 91
            +R G  IDGV Y  +  +L+       EG N W+T    EGKNR+IR+IC++L L VNRL RT YGPF LG+++ G +A V  P+    +L
Sbjct:  153 LRDGLTIDGVHYGKIVAKLDTA-----EGANVWMTFALKEGKNREIRRICEHLGLKVNRLIRTAYGPFQLGRLKRGALAEVS-PRQLREQL 237          
BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A371RH26_9PROT (Pseudouridine synthase n=1 Tax=Parvularcula marina TaxID=2292771 RepID=A0A371RH26_9PROT)

HSP 1 Score: 80.5 bits (197), Expect = 3.240e-15
Identity = 40/88 (45.45%), Postives = 59/88 (67.05%), Query Frame = 0
Query:    1 MRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFL 88
            ++ G  IDGV+Y  +  +L+      ++G N+WLTI  +EGKNR++R IC++L LTVNRL RT YGPF LG ++ G +   E+P+  L
Sbjct:  162 LKDGVEIDGVQYGPVEAKLDK-----QQGGNSWLTIAISEGKNREVRAICRHLGLTVNRLIRTSYGPFQLGALKLGEIE--EVPRKQL 242          
BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A7S2KG34_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KG34_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 7.700e-15
Identity = 44/84 (52.38%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    1 MRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIP 84
            +R G  I+GVRYKGM VR+EG   KG  G N WL I+CTEGKNRQIRK  ++  L V RL RT +G +SL  +  G    +E+P
Sbjct:  207 IRRGVEINGVRYKGMDVRIEGNLKKG--GTNTWLQIKCTEGKNRQIRKCLEHFGLNVTRLIRTSFGDYSLMTIPPG--MAIEVP 286          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDE8_ECTSI3.150e-5393.62RNA pseudouridylate synthase domain-containing pro... [more]
A0A6H5J790_9PHAE8.770e-5266.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZDT5_9STRA2.200e-2151.65Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7X4D014_9PROT4.490e-1750.00Pseudouridine synthase n=2 Tax=Rhodospirillaceae b... [more]
A0A2E6X8W3_9PROT1.150e-1644.94Pseudouridine synthase n=1 Tax=Magnetovibrio sp. T... [more]
A0A6B1HIP4_9PROT3.360e-1650.00Pseudouridine synthase n=1 Tax=Rhodospirillaceae b... [more]
UPI000EA92B651.770e-1545.05rRNA pseudouridine synthase n=1 Tax=Tsuneonella am... [more]
A0A7C5SFA6_9PROT2.870e-1545.05Pseudouridine synthase n=1 Tax=Thermopetrobacter s... [more]
A0A371RH26_9PROT3.240e-1545.45Pseudouridine synthase n=1 Tax=Parvularcula marina... [more]
A0A7S2KG34_9STRA7.700e-1552.38Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042092Pseudouridine synthase, RsuA/RluB/E/F, catalytic domainGENE3D3.30.70.1560coord: 26..71
e-value: 4.2E-11
score: 44.8
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 25..82
NoneNo IPR availablePANTHERPTHR21600:SF2RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 25..82
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 4..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5637contigL-elsbetiae_contig5637:1926..7653 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5637.13979.1mRNA_L-elsbetiae_contig5637.13979.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5637 1924..11537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5637.13979.1 ID=prot_L-elsbetiae_contig5637.13979.1|Name=mRNA_L-elsbetiae_contig5637.13979.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=171bp
MRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKIC
KYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRRLEEGTAGHSL
GAGGGGGSGRRMAGGPVPGTGKLRGAKAGGMSPPRQGDASSRGEGSDSRR
RRGDGSGAYGGGGGSGVREA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042092PsdUridine_s_RsuA/RluB/E/F_cat
IPR020103PsdUridine_synth_cat_dom_sf