mRNA_L-elsbetiae_contig5637.13979.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5637.13979.1
Unique NamemRNA_L-elsbetiae_contig5637.13979.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: D8LDE8_ECTSI (RNA pseudouridylate synthase domain-containing protein (C-terminal) RNA pseudouridylate synthase dom n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDE8_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 2.460e-58
Identity = 170/390 (43.59%), Postives = 194/390 (49.74%), Query Frame = 3 
Query:  513 GRELKEEDGGAPFGLLP*FSDGDDHAEGYDFLGTVEGQEEEEGRNASDATESDADHFSMTISTESERSADEVRRLQ--VKDPSMIRLSRRIARSGMASGRDTERLVEAGGGDGERGTGADPGDNVGPRYIVKVKV----RPGFGTISIWAL*GTGYAGTPSSCVRPI----RLG*DRSTDQRNEIDMTFSIGFKHLRQPGRWANPATLFDSVVCLLVFLTCFW*IVCRCLC**TPGEGTGAAGRPHAQPVDGAQD*ERARHEARSGGAGDRGGQAGGAQDARHAHAGGKTEEKLRAMRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRRLEEG 1652
            G E +EE  G   GL+           G D L T E ++++ G     ATE++ D                    Q   KDPS++RLSRRIARSG+AS R+ ER+VEAG       T   P  NVGPR IVKV V    +PG GT     + G      P S    +    ++  +  T    E   T       L+ P     P    D     L+ LT                   G   R    P          R                          G  TEEKLRAMRSGC IDGVRYKGMFVR+EG GGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVA VEIPKAF+RRLE+G
Sbjct:   39 GGEGQEEGAGGFHGLIG----------GVDDLLTTEAEDDDGGDVDQSATEAEPDXXXXXXXXXXXXXXXXXXXXQPPTKDPSVMRLSRRIARSGIASRREAERMVEAGVVMVNGATVQTPALNVGPRDIVKVNVGLFQQPGNGTDCFTFVQGK-VLERPESHTPKLWMVHKMRNELVTRHDPEGRPTVFDRLTKLKLPDT-LMPVGRLDYNTEGLLLLT-----------------NDGDLARKMELPSSNIVRTYSVRVY------------------------GNITEEKLRAMRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAAVEIPKAFMRRLEDG 375
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BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A6H5J790_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J790_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 1.680e-46
Identity = 105/158 (66.46%), Postives = 114/158 (72.15%), Query Frame = 3 
Query: 1371 MRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRRLEEGTAGHSLGAGGG------GGSGRRMAGGPVPGTGKLRGAKAGGM-----SPPRQGDASSRGEGSD 1811
            MRSGC IDGVRYKGMFVR+EG GGKGREGRNAWLTIECTEGK      ICKYLCLTVNRLART YGPFSLGKVRAGGVA VEIPKAF+RRLE+G      G+ GG      G SGRR+  GP PG G  R  +AG M     S P  G++S+ G G D
Sbjct:    1 MRSGCTIDGVRYKGMFVRVEGGGGKGREGRNAWLTIECTEGK------ICKYLCLTVNRLARTGYGPFSLGKVRAGGVAAVEIPKAFMRRLEDGG-----GSPGGAXXXXXGTSGRRL--GPGPGNGMRRELEAGRMRVSEVSSPGGGNSSTVGGGRD 145
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BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A835ZDT5_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT5_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.050e-21
Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 3 
Query: 1341 GGKTEEKLRAMRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRRL 1643
            G  T EKLR M+ GC I+GV YKGM V ++    +G E  N WL + C EGKN QIR++C++L LTVNRL RT +GPF LGK+ +GGVA V + + FL+++
Sbjct:  194 GSVTAEKLRTMQRGCVIEGVHYKGMVVNID----RG-EKHNTWLVVHCVEGKNNQIRRVCQHLNLTVNRLIRTAFGPFKLGKMASGGVAEVPLHEQFLKQV 289
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BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A6H5J9J6_9PHAE (S4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9J6_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 1.710e-15
Identity = 40/56 (71.43%), Postives = 44/56 (78.57%), Query Frame = 1 
Query: 1177 DERQGRALERPEDHTPNLWMAHKTRNELVTKHGPEGRATVVDRLAELKMPDTLMPV 1344
            D   G+ LERPE HTP LWM HK RNELVT+  PEGR TV DRLA+LK+PDTLMPV
Sbjct:  195 DTALGKVLERPESHTPKLWMVHKMRNELVTRDDPEGRPTVFDRLAKLKLPDTLMPV 250
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BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A7X4D014_9PROT (Pseudouridine synthase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A7X4D014_9PROT)

HSP 1 Score: 87.4 bits (215), Expect = 2.340e-15
Identity = 47/96 (48.96%), Postives = 60/96 (62.50%), Query Frame = 3 
Query: 1353 EEKLRAMRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRR 1640
            E  L  +  G  +DGVRY  +  RL+   G+   G NAWLT+   EGKNR+IRK+C +L LT NRL RT YGPF LGK+ AG V    +P+  LR+
Sbjct:  153 EAALARLADGVTVDGVRYGPVQARLDRPPGQSG-GANAWLTMSIREGKNREIRKLCAHLGLTANRLIRTAYGPFQLGKLAAGAVE--RVPERVLRQ 245
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BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A7C5SFA6_9PROT (Pseudouridine synthase n=1 Tax=Thermopetrobacter sp. TaxID=2268141 RepID=A0A7C5SFA6_9PROT)

HSP 1 Score: 85.9 bits (211), Expect = 4.390e-15
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 3 
Query: 1350 TEEKLRAMRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRRL 1643
            T++ L A+R G  IDGV Y  +  +L+       EG N W+T    EGKNR+IR+IC++L L VNRL RT YGPF LG+++ G +A V  P+    +L
Sbjct:  146 TQDALAALRDGLTIDGVHYGKIVAKLDTA-----EGANVWMTFALKEGKNREIRRICEHLGLKVNRLIRTAYGPFQLGRLKRGALAEVS-PRQLREQL 237
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BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A371RH26_9PROT (Pseudouridine synthase n=1 Tax=Parvularcula marina TaxID=2292771 RepID=A0A371RH26_9PROT)

HSP 1 Score: 85.9 bits (211), Expect = 5.080e-15
Identity = 45/98 (45.92%), Postives = 66/98 (67.35%), Query Frame = 3 
Query: 1344 GKTEEK-LRAMRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFL 1634
            G+T E+ L A++ G  IDGV+Y  +  +L+      ++G N+WLTI  +EGKNR++R IC++L LTVNRL RT YGPF LG ++ G +   E+P+  L
Sbjct:  152 GRTNERALEALKDGVEIDGVQYGPVEAKLDK-----QQGGNSWLTIAISEGKNREVRAICRHLGLTVNRLIRTSYGPFQLGALKLGEIE--EVPRKQL 242
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BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A2E6X8W3_9PROT (Pseudouridine synthase n=1 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E6X8W3_9PROT)

HSP 1 Score: 83.2 bits (204), Expect = 1.390e-14
Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 3 
Query: 1356 EKLRAMRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLR 1637
            + +  +  G  ++G++Y  +   L+ +G + +   NAWLT+  TEGKNR++RK+  +L LTVNRL RT YGPF LGK+R GG+   EI    +R
Sbjct:  102 QMINDLAKGLTVNGIKYGPIKATLDNIGEESKA--NAWLTLALTEGKNREVRKVLAHLGLTVNRLIRTTYGPFQLGKIRRGGIE--EIKNKVMR 191
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BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A6B1HIP4_9PROT (Pseudouridine synthase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6B1HIP4_9PROT)

HSP 1 Score: 85.1 bits (209), Expect = 1.470e-14
Identity = 47/96 (48.96%), Postives = 59/96 (61.46%), Query Frame = 3 
Query: 1353 EEKLRAMRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRR 1640
            E  L  +  G  +DGVRY  +  RL+    +   G NAWLT+   EGKNR+IRK+C +L LT NRL RT YGPF LGK+ AG V    IP+  LR+
Sbjct:  154 EAALARLAEGVTVDGVRYGPVQARLDRQPERSG-GANAWLTMSIREGKNREIRKLCAHLGLTANRLIRTAYGPFQLGKLAAGAVE--RIPERVLRQ 246
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BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Match: A0A5P9GQW5_9SPHN (Pseudouridine synthase n=1 Tax=Erythrobacter sp. THAF29 TaxID=2587851 RepID=A0A5P9GQW5_9SPHN)

HSP 1 Score: 83.6 bits (205), Expect = 3.280e-14
Identity = 46/98 (46.94%), Postives = 59/98 (60.20%), Query Frame = 3 
Query: 1350 TEEKLRAMRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKICKYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRRL 1643
            T+E+L A+  G  IDGVRY  +   LE   G G+   N W+ +  TEGKNR++R++ +YL L VNRL RT YGPF LG +  G VA   I K  L R 
Sbjct:  159 TQEQLEALIEGVEIDGVRYGSIDANLERASGSGK---NQWIEMTITEGKNREVRRVLEYLGLKVNRLIRTAYGPFRLGDLPRGRVA--RIRKGDLDRF 251
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5637.13979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDE8_ECTSI2.460e-5843.59RNA pseudouridylate synthase domain-containing pro... [more]
A0A6H5J790_9PHAE1.680e-4666.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZDT5_9STRA2.050e-2152.48Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A6H5J9J6_9PHAE1.710e-1571.43S4 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A7X4D014_9PROT2.340e-1548.96Pseudouridine synthase n=2 Tax=Rhodospirillaceae b... [more]
A0A7C5SFA6_9PROT4.390e-1544.90Pseudouridine synthase n=1 Tax=Thermopetrobacter s... [more]
A0A371RH26_9PROT5.080e-1545.92Pseudouridine synthase n=1 Tax=Parvularcula marina... [more]
A0A2E6X8W3_9PROT1.390e-1442.55Pseudouridine synthase n=1 Tax=Magnetovibrio sp. T... [more]
A0A6B1HIP4_9PROT1.470e-1448.96Pseudouridine synthase n=1 Tax=Rhodospirillaceae b... [more]
A0A5P9GQW5_9SPHN3.280e-1446.94Pseudouridine synthase n=1 Tax=Erythrobacter sp. T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5637contigL-elsbetiae_contig5637:1924..11537 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score79.7
Seed ortholog evalue1.4e-12
Seed eggNOG ortholog1123270.ATUR01000006_gene8
Preferred namerluB
KEGG koko:K06178,ko:K06181,ko:K06182,ko:K06183
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the pseudouridine synthase RsuA family
EggNOG OGs1MUCE@1224,2K0YS@204457,2TQP2@28211,COG1187@1,COG1187@2
EC5.4.99.19,5.4.99.20,5.4.99.21,5.4.99.22
COG Functional cat.J
Best tax levelSphingomonadales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons4
Model size1885
Cds size513
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5637.13979.1prot_L-elsbetiae_contig5637.13979.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5637 1926..7653 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816599.8122041-UTR-L-elsbetiae_contig5637:1923..19251622816599.8122041-UTR-L-elsbetiae_contig5637:1923..1925Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5637 1924..1925 -
1691683675.8296049-UTR-L-elsbetiae_contig5637:1923..19251691683675.8296049-UTR-L-elsbetiae_contig5637:1923..1925Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5637 1924..1925 -
1622816599.8531895-UTR-L-elsbetiae_contig5637:7653..76791622816599.8531895-UTR-L-elsbetiae_contig5637:7653..7679Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5637 7654..7679 -
1691683675.8622887-UTR-L-elsbetiae_contig5637:7653..76791691683675.8622887-UTR-L-elsbetiae_contig5637:7653..7679Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5637 7654..7679 -
1622816599.8636038-UTR-L-elsbetiae_contig5637:9187..104691622816599.8636038-UTR-L-elsbetiae_contig5637:9187..10469Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5637 9188..10469 -
1691683675.8715408-UTR-L-elsbetiae_contig5637:9187..104691691683675.8715408-UTR-L-elsbetiae_contig5637:9187..10469Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5637 9188..10469 -
1622816599.8737292-UTR-L-elsbetiae_contig5637:11475..115371622816599.8737292-UTR-L-elsbetiae_contig5637:11475..11537Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5637 11476..11537 -
1691683675.8809347-UTR-L-elsbetiae_contig5637:11475..115371691683675.8809347-UTR-L-elsbetiae_contig5637:11475..11537Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5637 11476..11537 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816599.8261092-CDS-L-elsbetiae_contig5637:1925..23121622816599.8261092-CDS-L-elsbetiae_contig5637:1925..2312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5637 1926..2312 -
1691683675.843393-CDS-L-elsbetiae_contig5637:1925..23121691683675.843393-CDS-L-elsbetiae_contig5637:1925..2312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5637 1926..2312 -
1622816599.8409476-CDS-L-elsbetiae_contig5637:7527..76531622816599.8409476-CDS-L-elsbetiae_contig5637:7527..7653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5637 7528..7653 -
1691683675.853145-CDS-L-elsbetiae_contig5637:7527..76531691683675.853145-CDS-L-elsbetiae_contig5637:7527..7653Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5637 7528..7653 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5637.13979.1

>prot_L-elsbetiae_contig5637.13979.1 ID=prot_L-elsbetiae_contig5637.13979.1|Name=mRNA_L-elsbetiae_contig5637.13979.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=171bp
MRSGCPIDGVRYKGMFVRLEGVGGKGREGRNAWLTIECTEGKNRQIRKIC
KYLCLTVNRLARTRYGPFSLGKVRAGGVAGVEIPKAFLRRLEEGTAGHSL
GAGGGGGSGRRMAGGPVPGTGKLRGAKAGGMSPPRQGDASSRGEGSDSRR
RRGDGSGAYGGGGGSGVREA*
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mRNA from alignment at L-elsbetiae_contig5637:1924..11537-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5637.13979.1 ID=mRNA_L-elsbetiae_contig5637.13979.1|Name=mRNA_L-elsbetiae_contig5637.13979.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9614bp|location=Sequence derived from alignment at L-elsbetiae_contig5637:1924..11537- (Laminarionema elsbetiae ELsaHSoW15)
ACTGCAGGATAGGGTGGAACCGGAGAGTGTCTTGATCTCAGCCGAAGCTG
GGGCTCTGAGAGGTACGACGACAGCAGTAGATAGTCGAGACTTTTGGCTT
GAAATCATCCCTTTTTCGACGCCCGGAGGCTCTCCCGTACTCGGCAACAA
GTGAGCTAACTAGCTTGGCTGCAAGGATAATATTTCCACGTCGCCTTTAA
GCCAAGGCACGTCGTTACCGACTGGACAACGATGCCACAAAGAGTTAATT
AAAAACGTAAGCCTGATGGCACGTTAGATGACGCACGACTACTGTGTTTT
CTGCGGCGGAACCTCATCTTGTCTGTTGGACACACACACCCGTTTGGGTT
TACACGTTTACAAGGCAGAGAGAGCCTACATTTGCGCATGCTAGGCCCGG
AATACCAGAAAAAGGTTCCCCTGAAGGATGTGTTGACCACTGCGGAAGCT
AGAGCTCTCAAATGTTTGACAGCAATCGAGCGGCACGATCATGTTGACAC
CCTTGGTTTGAAAACAGCGTCTTCGGATGGGGAGAGGCGGTAGTTTGGGG
GAACAGGGGAAGGAAGATTTGAGGGGGGTATCTGCACCGTCGTTTGAGTT
AGTGTCCATCACTGAGCCTTGTTCTTGGTAAGTGATCAGACCTTCTTCAA
AGTACCTAGCAGTTGAGTCGTGAGAGGCGTGTTTAGATATTCCATCCACC
TCTTTTCGCTCCCGTCAGTAGTCTATGTACCGCTGCACCACCGTTCGCGT
CCGGAGCGCTGGGCTGTGGGGTTGTGAATTCGTCGTGTGTGACACCAACG
TTTTTTTTGTGCCATGGGCTGCCCAAAAAGGCTCCGAGTTAGTTCAACGT
CGTGTATAACATGCTACTACTTGTCCCCAACAAAAACTCTGTAGACTACA
TGCATAACCCCAACCATTCAACAGCAGGCAAGGCACCATATGCAGTGAGG
AACCGAGGAACAGAGGACGACATCCAAGCCGGTTTCGTCTCAAATCTGCC
AACGCTCTCTCCACAACTCTCATCCCCCCGTCTCCTGTCCCCGCCCCCAC
CCTCTCGACCGCTATCAGAGTCCGAAAAAAGAAGGAATTCTGTCAATCTT
GCGTCACTCGTCAGGGCCATACCGGCGGCATGAGGCACAAGCCGTGCAGG
CAGCGGAACTGTCAGCAACCGCCGTGCCCCCCCGGCGCACGGATGCCGCA
GGCCTTCACCTCCTCCGGCTACTCCCCCCTACGGGGCGGCGGCGACAGCC
GCACCATCCGCTAGAAGACCATCGCCGTTGCCGAAAGCGCTTTTACGCTT
GCGGCGCGATGATCGCCTTTCCCCGGGAGGAGCGACAGGATTGATCCCAC
GGCGGGCGTTGGCGTTGTCGGCGACGGCCCGAGGCGCTAATAGCACGGGC
GATAACACGGGGAAGTCAGGGATCAGAGAGCGGCAGCTAGATGCGGCAGG
TGGAGGACGATAACGGCGGTGCTGGTATTGCTGTCATCGGCGGTGTACCT
GAAGGTTGCGAGGAAGAAGGGCGCGAGCTGAAGGAAGAAGACGGTGGAGC
TCCATTCGGCCTCCTCCCTTAGTTCAGCGACGGTGACGATCATGCGGAGG
GGTATGATTTCCTGGGGACGGTCGAGGGGCAGGAGGAGGAGGAGGGGCGC
AACGCCTCCGATGCAACCGAAAGCGACGCCGATCACTTCTCAATGACGAT
TTCGACCGAAAGCGAGAGAAGTGCGGACGAGGTGCGGCGATTGCAGGTGA
AGGACCCTTCCATGATCCGCCTGTCTCGCCGCATCGCGAGGTCCGGCATG
GCGTCCGGTCGAGACACCGAGCGCCTGGTGGAGGCGGGGGGTGGTGACGG
CGAACGGGGCACCGGTGCAGACCCCGGCGATAACGTGGGGCCCCGATACA
TCGTCAAAGTCAAAGTCAGGCCAGGCTTTGGCACCATTTCGATCTGGGCA
CTGTAGGGCACGGGGTATGCCGGTACTCCGTCCAGTTGTGTGCGCCCAAT
CAGATTGGGTTAAGATCGATCCACGGATCAGCGAAATGAAATCGATATGA
CTTTCAGTATAGGGTTCAAGCATCTGCGCCAGCCAGGCCGTTGGGCAAAT
CCCGCCACTTTGTTTGATTCTGTTGTCTGTTTGCTCGTGTTTTTGACCTG
TTTTTGGTAAATTGTTTGTCGATGTCTATGTTGATGAACGCCAGGGGAGG
GCACTGGAGCGGCCGGAAGACCACACGCCCAACCTGTGGATGGCGCACAA
GACTAGGAACGAGCTCGTCACGAAGCACGGTCCGGAGGGGCGGGCGACCG
TGGTGGACAGGCTGGCGGAGCTCAAGATGCCCGACACGCTCATGCCGGTG
GTGCGTGCACAGCATGTACAAGTTGCCTAGTGCGTAAAGCAGGGAGGTTA
TTTTATGGCGCTCGTTCATATGCAGCAGTTACTTTAAGGCGGCGGTGAGG
GGTACCCATTGATCAGTATAGGCCTTTTTCGAAGAATAATCACATACCCC
TCTGAATATCACGGAGCCTCACTTGGAGTTTGTGTGGGCTTTCCGAAAAC
GCCCGCATGATCTGACACAGTTCTGCCATGAAACAGAGGCGTTCCGAGAC
TTTCAGCTTTGAACAGTTTGAGTTTGAGGAGAGGTTTTTAACCACCCCTC
ACGTGGAGAATCATGAGCTCCGCTCTGTTTTGCTGTGGGACCCCTCGACT
ATTCCACACTCTTCCGAAACAGCCAGGCTACATTCGCGTCTAGTCTGTTT
CTTGATCAGGGCAAAAAAGCCCGGTGTGGGGCTCTGGGGCGTGGCTTGAA
ATATTCAGCCGATTAAACGAAAAAAGACCGGTCGGAGAAATTGTTCGTGT
GCACCAGAACATCGAAAGGGCGGCGCAAAGCCACCTGCTGCAGCTACCCA
GGACATGCCGCGGCCCCTCCACACCATATCAGTAGGACTTCCCAGCATCT
TCCTCTGTTCTTGCCTGTGAGGGGCGACCTATCTGATCTCCTAAACATCA
AACTGCCAGTGGAGGTGTCTTTGACAGTCCTTTCAAAACATTGATTTTGC
ACCTCGGAGAGCAAACTTTCCGCCTCCAAGACAGCTGCAAATTCAGAGCC
GGAGGATTTATTTGTAGAGAACCGCAAACTGTTGCGTTGGAGTAGTTCGA
GGGGTTTAGCAGCGGCGCGCTGAGGGCCAAACTGGAATGTGACGGTGCTT
TTGGGAGGGCCAGTTCTATCACTTTCAGCGTACCCCGAACAGTTTGAAAA
TCAATCGAATCGTGCTCCTGGATCCAAAGTTCAGCTGTCGGAATCCCCTC
ACCATTCCTGTAAGGTTTCTATCTGCGCATGTAATCGTTTTACGGTAGCT
TGTCTCAAACATGGAGGAAAAACGTGAGCATGACGTCTACCATGAAGCAT
GTTGGCTCGCTCTCATCTACACACTGCGGTCCTGCCGATGTTGGTTTTGC
CGCGGTTTTTGATCTGATTCGGAAACTTTTCTATTGAGTTGGGGCTTGAC
CCCGTGTGACGTGGTAGGGCCTTGTGCCGGAGGACGCCATGAAGGCTCAT
CTATAGGTTTTCATATCTCGACAGCAGTGTCGGGCTGGCTCTGCCAAATT
GATATCGCTCCGTGGCGGAAAGGGAAGGGGAGGGGGGGCGTACCCCAGAC
TATTGTTTCACAGCAGAGACGAGTCAGCACTTGGGAATATGGACGCACTG
CTAGCTTCGTTTTAGACCGGGTCTGAGTACTGAGTTGTGCCCCAAGAGGC
TAAAATATTCGTCACAACTGCTGTACGGACAGCAGTAGGCCTGGTGGGCG
GTTGTGTTTGGTCACGGTCTGATTGTTGATGGTGGACCGTTTCTTCTTCA
CCGCGCAGGTAAAACGGAGGAGAAGCTGAGGGCCATGCGGAGCGGCTGCC
CCATCGACGGAGTCCGGTACAAGGGCATGTTCGTGAGGCTCGAGGGGGTT
GGTGGCAAGGGGAGGGAGGGCCGCAACGCCTGGCTGACCATCGAGTGCAC
CGAGGGAAAAGTGAGTGTGTAAACAATAGGTCGTTTACGTTGTCGATAGC
TGTTTAGCTGTTATGTATTCGCTTTTCTGGGCACCGGAGGAGGAGCGATT
GCAGGAATACTGGCTATTTCACGATTTTATGAAAGCCTCTTGATCACTTC
GGTCCTTGAATGTCAACTCAAGCCCCAAATAGAGGGGTGCCCTCCCGTAC
TTCCCCGGAAGATAGATACCATGCCGGTGTAGAGTAGCTCAATTTACGGC
TGGAAACTGCTTTTCAACTTTCATGTACATGTCCTACATACATAGTCTAT
GGTCTGTGCACAACATGTATCCAATGGCGTTTTGTTTCATAACTTTTGAA
AGAAATCGATTCAGCCGGAATTCTTGCCATCCTAGTGATCTCAAGACCAG
GGGGAATACTATGGGCTTGAGAAAACAAAAATACTAGACCCTGAAGCGGG
GCAATTGTTTGCGCGTATCACAGCAGCAAACAGACCGTCGTGCAAAAATA
CCTGCAGTAGGCTGGGTCGTGCGGGAAAGAGATCCCCCCCCCCGATACAT
CCAACTTTCGTTTGACACGCCCCGGCCTCATTCTTGCTGCGAACCCCCTC
TTTTTTTTGGGCTCGCCAATGTTATTTGGATTAGGTTTCAAGGGAGAACT
TGTTTCGCTCCTTTACTTCAAACTCTCGCCGCAGAGTGCCGTGTTGGTGG
TGAGGAAAGAGCAGATCTGTAGCTCCTGGACTTCTCGATGGTTGTAGGAA
AAAATAACAAAGCGAATCGATGATCTGGCCGCGGCGTGGAGATGTTTTAA
ACCGATCACAAGTTCGTCGGGGACTCGCAGACAAAAAGCACGCACATACA
ACGACCCCCACCAAAAGCCCCGGCCCCCTCCGGTCCGCCCTGGTACCCCT
GCACCAGCCCTAGGAGCTGACATAACTCATCCCGGACCAAGTAAACTAGA
AGGGGGTGCGATATACTGCTCATAGCTAGTGCCGGTCCAAATTTTAAACT
CAGAATCGCTCTGTGAGTGTCGAATCACAACTGCCTTCCCGCACACTTTG
GTGCCCTCGGCTAGGCCAGCAGCAGCAGACGGCAGCAGCACCTCTAACTG
CAGTGTAAGGAGTTAGCTAGTTTCAGTTGGTGCTCTGCACACCTTAGACT
TTCCTCTTGCAGACGTGCGCGGTCTTGCGATTGATCTCTTCAGGGATCAA
AAAGCTGCGTTTCGTCTAGGAATCGTGCTCGACTGTGTCGCAGCTGGCTC
TCTTTTTTCGACTCTCCCTCTATCCTCCCTATCCAATTCGTGCGATGCAA
CGTCTAGATGCAATGCAATAGCTACCACCTAATTTACTGGCCCGCTCTGT
AGCACACATCTCTACTACACACCCTCCAAGTCGCGTTTTGAATGACTTCC
TCCTTCAAGTTGAGATATCGGCTTTTTTATGCGTGGGTATTCTAATGCCC
TATGCCTTTGGCCGTGACAGAATGCACCCCCTTGAAATCCTCCCGCGGAT
GTGCCCTCTTAAAATTTTGTTCCAATTGAACACTGTGGCGAGGTGTGTCC
ATGTCTCGCACACACCAACAGCAGTAGCCTACCACGTAAAGAAACGCTAG
ACCTCCACAAATCGCACCCGATACTGGTTGCGCGACGAAGACGTAGAACT
GGCTTCTAGATGGCAGTGAGAAGCCCTTCCAAGCTCCATAGGAATGGTAA
ACAGCTTCGACCGATGCTATCCCACACTCCAAACACGACGAAATATTTCA
ACTCGACCTGCCGCGGATTCAAAGCACTGCGCAAATACGCTCTCTCGCGG
CCCCGAAAACCTGACGCGGGCGCGCTCTGTGATACTTCGAAGTATATACA
ATAGATAGAGAAAGATAGGGAATGCCGAGAGCTGTGGAGTAGAACCCTCC
TGCATGCTGATGGTCAAAAGTGGACGTGTGCACCAGCGAGTGGAAAACAA
TGAACCGCGGGGTGGGTCTACGTACGCCGCGGCACCTCTCTGCTGCTGCT
CAAAGGTCCTCACCACGAGGAAACACTACTCTACTGCTGCTGCTGGGAGC
TCTCTCTCTTCTGTCCTGTATCTCCGCATCATCGTGTGTACATGTAGTGG
TGCGTGCCGGGGAGTACGTAGATGACACCTCGTCTCAGCTGCTTTTGGTG
GGTGTCCATCAGGGCAGCTGAAGGCGGTGATTCTGAGAGTTCATATGTCG
TGTCAACAACGGAACTAGGCCTTGGTTTGGGAAACGGCCGGCGCAAAAAT
GTTTGTGCTTATTTAGCCAGGGGTTGTGCATTTTTTGTTACTCGAATCGG
TCCGGAAACAGCTTCTGAATCGGTCAAAAGGTATGTCAATCGATGCGAAC
GGACAGAAAGACAGACAGACAGCAAGTAATAAGAGTATTTATGTCATGGG
TCGCAGCAGCAGGGGGGTGTTACTTAACGTACACAAGCACAGGAACCAAA
TTCATCTATCTACATATTGAGACAGTTTTGTTCGAAAAACAAACTCCACT
ACATACGTATCGTTCCGGTTTTTTTTTTCGCGCGCTAAATAAATTCCGAT
GGCGGTAGTCTAATTTCAAGTTATTTACGAACCACACCCCAATATATTTA
GATCCGAAGACGGGGAAAAAGTGGGAGAAATCGGTGTTTTTTTGGACAAA
AAATTGAACATCTCGACAACTCGATTGTTACTCTGAAAAAACAACACAGT
TAGTTCCGGTTTCCTGCTAGCGCTAGCAGGGGAGACATCACTGTGACTGT
GCCCAGGATATACACAGCGAACACTGTTTGAAAAAACAAAATACCACTAC
ATTTACTATTGTTACAGCCCCCAAACATGGTTCGTTAGATACGCGCGCGA
AATAAATTCCTATGGCGTTAGTCTAATTTCAAGTTATTTAGGAGCCACAT
GCCGAGAGAGGAGCAAAGATGGGGAAAGAGTGGGAAAAATCGGCAGTTTG
GACTTTAAATCTCGACAACTCGATTGTTACTCTGAAAAAACAACACAGTC
CCAGTCTTGTTGAGCCTGCTAGCGCTAGCAGGAGAGATATCACTGTAACT
GTGCCCAGGATAGACACAGCAAACACTGGTAGAAAAAAAAATACCACTCA
ACAGTTACTATGCAGCCCCCGAATATGGTGCTTTGCTTATAAATTTGCTG
GGGCTCTCGTCCGAGCGCTGGTAAACGTGTGGGTATCCGTAAGAAAAAAT
AAAAAAACAGTTCCGGGGATCGAACTCAGGCCGGATCTTAGGGCGACGAA
ACTTTGCCACGAAACGGAATTTTTTTTCTGGTCCGTGGCTCTCCCTTGGA
AGGGGGGATGGGGGTCGGCGAGACGCGCACGGAATTTCTTGGGTCGCCAA
CCAAACCACGGCGACACTGCTGTCTCAGGCCCTAGGTCACGGACTGCCAC
GAGACCTTGTAGGCTGTACCCCCCACGCCTGTTGGAGTCTTGCGATATTG
CTTTCGTGGTCATAGGCTTTGTGTGGCTGGAGGGGTAGTCGGCACGCGAT
CAAAAATGACATTTCGTGTGACCAATCCGTCCGCCAAATGACACGGTTTG
GGTGCATGTTTCGTGTGACGTTTTGCCAGGAGGGTCTCTATTTTGTCCGC
CATATCAACCAGTCCCTCGCCAAAACAAAAATCGCCCGACAACAAAGACT
AGCTGCGAAAAATCCTACGAGCATGGAGCGTAGGCCCGCAAGATTTGATG
GCAATCCGTCAGATATGGCTGGAGAGTTCATGGGTGATGGGAGCGACTGT
AGGGCGTGTCTCCATGTCATGGGGGTTCGAGGCGCCCCAACACCCCCCCT
TCGGTTCAGGGGCCCGCCCCAGACCAAAAATTGGTTTCGCGGCGAAATTT
CGTCGCCACAAGATCTGGCTACAGGGCTCGTTTGCCACCGTCTTTGTTGA
ACTCGGTTGGTCAGTTTTCGCGTCTAAAACCCATGTTTATGGCCAAAAAA
TGTTCCCGAAAATCTTAAAACTTCAAACATTTTGCGAACGAACATTTTCA
AACGCTTTTTATGGGAAAAAACCCTTGCCAAAATGTTGTCAACCTTTTCA
AATGGGGCAAAAGTTGCTCTTTTGCGAAAATGTTTGCCGAACATTTTCAA
ATGGAGCACCTCGCGAAAATGTTTGGTCGGCTTAACCTGAAGACGCCGAA
ATTCGTCAAAACCAACCACTGCAAATAGACAGGTCGTTTGGAACGTACAG
AGAAAACATGCGCTTGTGTCTCCGAACGGTGAGAAAACCCCTGTTCCAGA
GGAGACGCGACTACAAACCTAACCAGCTCTCATCCGCTAGATCAGGTAGG
TCGTGAGTTCGAAACTCGGCGGGAGCGAATTGTTCTTTGCGAAGTGAGTT
TTTTCTCTCACTTCCGTTCCTTTCAGTGGATAGTGTACACAAACTTCGAC
ATCACCGTCGATGAGGGAAAGGAACGGCTGAACCTCTCTCGGGATAAAAA
TAGTAGGCGAGCACCGCGGACGGGGGGAGTGGGGGCCTTGGGAAGGGAGC
CCTCCTGTGTGACCACGGTTCGGTACTCTGTCAACATGTCATCGTGACAG
GGAACCCATCGAGCACTGGAAATAAATGTGAAGAAAAAACACACGCACAG
ACACACACACACACACGTAAGTAAATTCAGCACCCCACAGTTTCGCTGCC
CAGACAGGAGGGAAATTGCCGCCATGTTTGTGCGCCAAATAACGTATGTC
GGCCCCCTCCTTACCCCTGAATTGTTCGTTCTTGTCCCCCCATCCACCTT
GTTGTACGTATATCCCTCTCTCTCCTCCCCTTCAGCCTTCTGGCACTACT
GTTGGTGGTCGTACATAGAAATGTGGACAACAGAACAATGCCCCGAGGCC
CTCTTCCCGCCTTGTCTTCGGCAATCCAGCGCGTGCTCCAGCCGGCTTTG
CCTGGTTAGTTAGAGCGTCGATGTGGAAACACATGCCTAGCGGCTCATAC
GTTGACGGCGAAGGTAACCCTCCCTCCCTCTCCCTGTGCACGGTAGATGC
CAACCCCACGACTATGGCAGCCAAAAACCCCACAACAACAGAAAATGTCA
ACAAAAGTTACCATACATGGCTGTAAAAGAACTGCGACAATACAAGGGGG
ATCATTGAGACCTTTTACAATTAGAGTTTGAGAACCTTATCATTTCCCAC
CAACACTACCTATCTATATACCCGCCCCCGCTCGTGTTGTTTCTCTTTCG
CTCACTTCGCGGACGCCCTGAACAGAACCGGCAAATCCGCAAGATCTGCA
AGTACCTGTGCCTGACCGTGAACCGGCTCGCCAGGACCCGCTACGGCCCT
TTCAGCCTCGGCAAGGTCCGGGCCGGTGGGGTCGCCGGCGTGGAAATCCC
GAAGGCGTTTTTGCGGCGCCTGGAGGAGGGCACCGCCGGACATTCACTGG
GGGCAGGCGGCGGCGGCGGTAGTGGTAGGCGAATGGCAGGGGGGCCGGTG
CCTGGAACAGGGAAGCTCCGAGGTGCAAAGGCTGGCGGTATGTCGCCGCC
GCGCCAAGGGGACGCGTCTTCGAGAGGGGAAGGGTCGGACAGTAGGAGGA
GGAGGGGTGATGGTAGTGGAGCGTATGGTGGAGGAGGGGGGAGTGGGGTT
CGAGAAGCGTAGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5637:1924..11537-

>mRNA_L-elsbetiae_contig5637.13979.1 ID=mRNA_L-elsbetiae_contig5637.13979.1|Name=mRNA_L-elsbetiae_contig5637.13979.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1026bp|location=Sequence derived from alignment at L-elsbetiae_contig5637:1924..11537- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGGAGCGGCTGCCCCATCGACGGAGTCCGGTACAAGGGCATGTTCGT
GAGGCTCGAGGGGGTTGGTGGCAAGGGGAGGGAGGGCCGCAACGCCTGGC
TGACCATCGAGTGCACCGAGGGAAAAATGCGGAGCGGCTGCCCCATCGAC
GGAGTCCGGTACAAGGGCATGTTCGTGAGGCTCGAGGGGGTTGGTGGCAA
GGGGAGGGAGGGCCGCAACGCCTGGCTGACCATCGAGTGCACCGAGGGAA
AAAACCGGCAAATCCGCAAGATCTGCAAGTACCTGTGCCTGACCGTGAAC
CGGCTCGCCAGGACCCGCTACGGCCCTTTCAGCCTCGGCAAGGTCCGGGC
CGGTGGGGTCGCCGGCGTGGAAATCCCGAAGGCGTTTTTGCGGCGCCTGG
AGGAGGGCACCGCCGGACATTCACTGGGGGCAGGCGGCGGCGGCGGTAGT
GGTAGGCGAATGGCAGGGGGGCCGGTGCCTGGAACAGGGAAGCTCCGAGG
TGCAAAGGCTGGCGGTATGTCGCCGCCGCGCCAAGGGGACGCGTCTTCGA
GAGGGGAAGGGTCGGACAGTAGGAGGAGGAGGGGTGATGGTAGTGGAGCG
TATGGTGGAGGAGGGGGGAGTGGGGTTCGAGAAGCGTAGAACCGGCAAAT
CCGCAAGATCTGCAAGTACCTGTGCCTGACCGTGAACCGGCTCGCCAGGA
CCCGCTACGGCCCTTTCAGCCTCGGCAAGGTCCGGGCCGGTGGGGTCGCC
GGCGTGGAAATCCCGAAGGCGTTTTTGCGGCGCCTGGAGGAGGGCACCGC
CGGACATTCACTGGGGGCAGGCGGCGGCGGCGGTAGTGGTAGGCGAATGG
CAGGGGGGCCGGTGCCTGGAACAGGGAAGCTCCGAGGTGCAAAGGCTGGC
GGTATGTCGCCGCCGCGCCAAGGGGACGCGTCTTCGAGAGGGGAAGGGTC
GGACAGTAGGAGGAGGAGGGGTGATGGTAGTGGAGCGTATGGTGGAGGAG
GGGGGAGTGGGGTTCGAGAAGCGTAG
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