mRNA_L-elsbetiae_contig5631.13974.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5631.13974.1
Unique NamemRNA_L-elsbetiae_contig5631.13974.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A6H5L7F1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F1_9PHAE)

HSP 1 Score: 458 bits (1179), Expect = 6.400e-147
Identity = 233/273 (85.35%), Postives = 249/273 (91.21%), Query Frame = 1 
Query:    1 KAGRGGAALRALRLMVEQQLPVSQKQYVGAMEVCMRQGSWTSGLEVFRLLLGDLRPRGLSPKQSTWKSLAKGLRAAGQADQGVAVLRQALKAGVRHIDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERSPGGSLAQTLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLVDICVRSGDLDRAYNLLKNPTLLPSP 819
            K+GRGG ALRALRLMVE+ L VSQKQYVGAME CMRQGSWTSGLEVFRLLL DLRPRGLSPKQSTW+SLA+GLR+AGQADQ + VLRQAL+AGV  IDEQVCSILLDLCAVKGRMGLAEEI SLMETHRIPKGPVTYCVLLKGYGRQRRLRGV++TMREMKERG+VPDVVALNAAVDA VRCGEL KAR +L SME SPGGS+AQTL+YNTLIKGLGREL V EAF VARGM D+GC P+EVT NSLVDICVRSG+LDRAYNLLKNP L P P
Sbjct:  450 KSGRGGVALRALRLMVEENLSVSQKQYVGAMEACMRQGSWTSGLEVFRLLLEDLRPRGLSPKQSTWRSLARGLRSAGQADQALVVLRQALRAGVGGIDEQVCSILLDLCAVKGRMGLAEEIASLMETHRIPKGPVTYCVLLKGYGRQRRLRGVESTMREMKERGIVPDVVALNAAVDALVRCGELSKARSVLRSMEESPGGSIAQTLSYNTLIKGLGRELLVDEAFGVARGMLDKGCSPDEVTTNSLVDICVRSGNLDRAYNLLKNPLLFPPP 722
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BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: D8LBV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV9_ECTSI)

HSP 1 Score: 434 bits (1115), Expect = 1.270e-141
Identity = 220/259 (84.94%), Postives = 235/259 (90.73%), Query Frame = 1 
Query:   43 MVEQQLPVSQKQYVGAMEVCMRQGSWTSGLEVFRLLLGDLRPRGLSPKQSTWKSLAKGLRAAGQADQGVAVLRQALKAGVRHIDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERSPGGSLAQTLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLVDICVRSGDLDRAYNLLKNPTLLPSP 819
            MVE+ L VSQKQYVGAME CMRQGSWTSGLEVFRLLL DLRPRGLSPKQSTW+SLA+GLR+ GQADQ + VLRQAL+AGV  IDEQVCSILLDLCAVKGRMGLAEEI SLMETHRIPKGPVTYCVLLKGYGRQRRL GV++TMREMKERG+VPDVVALNAAVDAFVRC EL KAR +L  ME SPGGS+AQTL+YNTLIKGLGREL V EAF VARGM D+GCLP+EVT NSLVDICVRSG+LDRAYNLLKNPTL P P
Sbjct:    1 MVEENLSVSQKQYVGAMEACMRQGSWTSGLEVFRLLLEDLRPRGLSPKQSTWRSLARGLRSVGQADQALVVLRQALRAGVGGIDEQVCSILLDLCAVKGRMGLAEEIASLMETHRIPKGPVTYCVLLKGYGRQRRLGGVESTMREMKERGIVPDVVALNAAVDAFVRCAELSKARTVLRRMEESPGGSIAQTLSYNTLIKGLGRELLVDEAFGVARGMLDKGCLPDEVTTNSLVDICVRSGNLDRAYNLLKNPTLFPLP 259
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BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A835YV31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV31_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.550e-59
Identity = 123/273 (45.05%), Postives = 158/273 (57.88%), Query Frame = 1 
Query:   40 LMVEQQLPVSQKQYVGAMEVCMRQGSWTSGLEVFRLLLGDLRPRGLSPKQSTWKSLAKGLRAAGQADQGVAVLRQALKAGVRH------------IDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERS----------PGGSLAQTLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLVDICVRSGDLDRAYNLL 792
            L V Q + +S   Y   + +C+  G W + L+ F   L  +R  G  P  +T+++L +GL+ AGQ D   A+L  AL+                  DEQ+CS++LDLCA  GRM LAE IV  M    +P G VT+C+L+KGYGRQRR   VDA +R M+   V PDVV LNAAVDA+VRCGEL +A +++ +ME S           G     T TYNTLIKGLG+  R+ EAF     MA  GC  + VT NSL+D CVR G LDRAY LL
Sbjct:    2 LRVGQHVDISA--YEAVISLCVGTGDWRAALKAFERYLEGVRSAGALPPLATFRTLVRGLQKAGQVDAAAAILHIALRGASSSSSSGAAAPSLPVADEQLCSVVLDLCAETGRMTLAETIVDAMHDRGVPAGNVTHCILVKGYGRQRRAHRVDAALRGMRRARVAPDVVTLNAAVDAYVRCGELRRAEQVVRAMEASVLSSSGGGGDSGAVAPNTRTYNTLIKGLGKAGRLDEAFATLEAMAVSGCEADSVTANSLIDACVRCGQLDRAYALL 272
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BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A836CQL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQL2_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.340e-52
Identity = 116/282 (41.13%), Postives = 157/282 (55.67%), Query Frame = 1 
Query:    1 KAGRGGAALRALRLMVEQQLPVSQKQYVGAMEVCMRQGSWTSGLEVFRLLLGDLRPRGLSPKQSTWKSLAKGLRAAGQADQGVAVLRQALKA----------GVRHIDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERSPGGSLA-----QTLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLVDICVRSGDLDRAYNLLKNP 801
            + G  GA L+AL+ M+E         +  A+ +CM  G W  GL+ F   L     +G  P  ++++ + +GL  A Q D  VAVL  AL+           G    D ++C ++LDLCA K RMGLAE +V+ M   R+    V YC+L+KGYGRQ                   PDVV LNAAVDA+VRCGEL +A++++ +ME S G   A      T TYNTLIKGLG+  R+ +AF VAR M   GC P+ VT NSL++ C+R G L RA+ LL+ P
Sbjct:  111 RRGHSGAVLQALQSMLESGNTPDAGMFDAAVALCMGNGQWRLGLKAFEHHLESAESQGRLPPLASFRLVIRGLYGARQPDPAVAVLHVALRGAPSSSGGGSGGAAVADPELCCLVLDLCADKRRMGLAEGVVAAMARARVTLSAVAYCILIKGYGRQXXXXXXXXXXXXXXXXXXXPDVVTLNAAVDAYVRCGELRRAQQVVRAMEASGGAGGAGAVPPNTRTYNTLIKGLGQAGRLEDAFAVARAMTAPGCRPDAVTANSLIEACIRCGQLTRAHALLRAP 392
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BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A7S2SBE2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBE2_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.010e-30
Identity = 82/220 (37.27%), Postives = 125/220 (56.82%), Query Frame = 1 
Query:  190 STWKSLAKGLRAAGQADQGVAVLRQALK-AGVRHIDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERSPG----------GSLAQ-TLTYNTLIKGLGRELRVGEAFEVARGMADRG------CLPNEVTINSLVDICVRSGDLDRAYNLLK 795
            S +  + + L A G+  + + VL   ++     HI E+   ++L+ CA    M  A E+++LM T  +P+  VTYC+L+KGYGR    + VD  + +M++ GV  DV+ LNAA+DA+VRCG L KA  LL +M+R             GSLA  + ++NTLIKGLG+   +  A  +   M D        CLPN+VT+NSL+D  VR+ ++  A  L++
Sbjct:    4 SAYLMVLRELAATGRCGEAIEVLGMLVEDVDGDHIPERAFGMVLNTCADSHHMDRAPEVLALMATAGVPRTEVTYCILIKGYGRLGSDQAVDHLLADMRKHGVKLDVITLNAAMDAYVRCGNLGKATSLLDAMKREARRLHAQGKALQGSLAPVSRSFNTLIKGLGQAGHLEGALGLLDEMRDLAYATQAQCLPNDVTLNSLLDAHVRAKNVSGALLLMR 223
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BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A5J4Z316_PORPP (Pentatricopeptide repeat-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z316_PORPP)

HSP 1 Score: 124 bits (312), Expect = 1.050e-27
Identity = 78/210 (37.14%), Postives = 119/210 (56.67%), Query Frame = 1 
Query:  190 STWKSLAKGLRAAGQADQGVAVL---------RQALKAGVRHIDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERSPGGSLAQTLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLVDICVRSGDLDRAYNLL 792
            S++  +A+ LR AG+ ++  A+L         ++A        DE++C +  DL A +  +GLA +I+S ME+H +  GP  Y  L+K YGR     GV+ T++ M  + V PD VALNAA+DA VRC ++ +A+KLL+SM  +         +YNT++KGL     V EAF + + M D G  P++VT N+L+  CV      RA  L+
Sbjct:  247 SSYALVARALRDAGRPEELAAMLTRMWAIAREKKANGFAACEPDEKMCCLAADLAAEQRNVGLARDIISEMESHGVKAGPYAYAALIKAYGRSGNDVGVERTLQRMHTQRVQPDQVALNAAIDALVRCKKVKRAQKLLSSMP-AEWSVQPNVRSYNTVMKGLAELGLVDEAFALRKEMLDLGLEPSKVTRNTLLLACVNGNAWVRAQKLV 455
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BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A7S0LHA5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHA5_9EUKA)

HSP 1 Score: 95.9 bits (237), Expect = 5.930e-18
Identity = 66/186 (35.48%), Postives = 96/186 (51.61%), Query Frame = 1 
Query:  295 EQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRC--------GELP----------KARKLLASMERSPGGSLAQTLTYNTLIKGLGRELRVGEAFEVARGM--ADRGCLPNEVTINSLVDICVRSGDLDRAYNLL 792
            E + SI+L+ CA  GRM L+E +++ M  H +    +T+C+L+KGYGR   +  V      M+ R V PD+   NA +DA VR         GEL           +A ++L  M     G      ++NTLIKG  R  R+ +AF V R +  A      NEVT ++L+  CVR+G+L RA  +L
Sbjct:  141 EGLASIVLNGCAEAGRMDLSESVLTTMHEHEVSITALTFCILIKGYGRVADIPRVRRIYSTMRRRSVAPDLATFNALLDAIVRNIALASGVGGELTFVASSDALLAEAEQVLEDMREQ--GISPSPRSFNTLIKGYSRVGRMRDAFNVVRRLRIALGAGAANEVTYSTLIHGCVRAGELRRARQIL 324
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BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A7S3YJE3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJE3_HETAK)

HSP 1 Score: 78.6 bits (192), Expect = 2.450e-14
Identity = 47/102 (46.08%), Postives = 61/102 (59.80%), Query Frame = 1 
Query:  502 DVVALNAAVDAFVRCGELPKARKLLASMERSPGGSLA--QTLTYNTLIKGLGRELRVGEA---FEVARGMADRGCLPNEVTINSLVDICVRSGDLDRAYNLL 792
            DVV LN+ VDAFV+CG++ +AR+++A+M R   G        TYNTLIKGL R    G A   F +   M  RG  P EVT+++LV  C R+G L  A  LL
Sbjct:    2 DVVLLNSVVDAFVQCGDVRRARQVVAAMRRGEYGPACPPNARTYNTLIKGLARRGDRGAAQAAFGLVAEMEGRGLAPTEVTLHTLVAACARAGMLGDARQLL 103
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BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A7R9Y8W5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8W5_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 9.790e-11
Identity = 53/192 (27.60%), Postives = 89/192 (46.35%), Query Frame = 1 
Query:  232 QADQGVAVLRQALKAGVRHID----EQVCSILLDLCAVKGR----MGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERS-PGGSLAQ------------TLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLV 744
            ++D  +A + + L  G R++      Q+  I+LD  A         GL+E  ++ M+   +    V+YC+++K YGRQR  + +D  +  + +  V  D    NA + A + CG+L  A K +  +E     G L Q            T TYN L+ G      +   F V R M +RG   +E+T N+++
Sbjct:   20 RSDDDIAYVHKLLSHGRRNLQAGEARQMYHIVLDALANGDADDRSAGLSEAFLAEMQDAGLKPNAVSYCIMVKTYGRQRDAQKLDGVVNRIADEFVELDAPLFNAIIQAHIACGDLDLAAKTIRKVEEMWRQGILGQDPRRSVKIPKPNTRTYNILLNGYAEADDIVSCFRVLRQMQERGVPADEITANTII 211
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BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Match: A0A7S4BRQ8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BRQ8_CHRCT)

HSP 1 Score: 71.6 bits (174), Expect = 2.920e-10
Identity = 34/73 (46.58%), Postives = 49/73 (67.12%), Query Frame = 1 
Query:  289 IDEQVCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRLRGVDATMREMKERGVVPDV 507
            +DE+V SI+L+ CA +GRM LA   V+ + +H +  G VTYC+L+KGYGR   +R VD     ++E GV PD+
Sbjct:  194 VDERVTSIVLNSCAERGRMDLAMATVTALRSHDVAFGQVTYCILVKGYGRVGDVRSVDGIFSRLREAGVSPDM 266
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5631.13974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F1_9PHAE6.400e-14785.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBV9_ECTSI1.270e-14184.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV31_9STRA2.550e-5945.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQL2_9STRA1.340e-5241.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SBE2_9STRA4.010e-3037.27Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A5J4Z316_PORPP1.050e-2737.14Pentatricopeptide repeat-containing protein n=1 Ta... [more]
A0A7S0LHA5_9EUKA5.930e-1835.48Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S3YJE3_HETAK2.450e-1446.08Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R9Y8W5_9STRA9.790e-1127.60Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S4BRQ8_CHRCT2.920e-1046.58Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5631contigL-elsbetiae_contig5631:516..6853 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score437.2
Seed ortholog evalue7.3e-120
Seed eggNOG ortholog2880.D8LBV9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.endonuclease activity
EggNOG OGsKOG4197@1,KOG4197@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1055
Cds size1053
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5631.13974.1prot_L-elsbetiae_contig5631.13974.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5631 517..6853 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816599.5810893-CDS-L-elsbetiae_contig5631:516..8461622816599.5810893-CDS-L-elsbetiae_contig5631:516..846Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 517..846 -
1691683675.671508-CDS-L-elsbetiae_contig5631:516..8461691683675.671508-CDS-L-elsbetiae_contig5631:516..846Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 517..846 -
1622816599.5920892-CDS-L-elsbetiae_contig5631:1257..14381622816599.5920892-CDS-L-elsbetiae_contig5631:1257..1438Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 1258..1438 -
1691683675.6822526-CDS-L-elsbetiae_contig5631:1257..14381691683675.6822526-CDS-L-elsbetiae_contig5631:1257..1438Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 1258..1438 -
1622816599.6026404-CDS-L-elsbetiae_contig5631:3257..34021622816599.6026404-CDS-L-elsbetiae_contig5631:3257..3402Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 3258..3402 -
1691683675.691689-CDS-L-elsbetiae_contig5631:3257..34021691683675.691689-CDS-L-elsbetiae_contig5631:3257..3402Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 3258..3402 -
1622816599.6144643-CDS-L-elsbetiae_contig5631:3989..40861622816599.6144643-CDS-L-elsbetiae_contig5631:3989..4086Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 3990..4086 -
1691683675.702694-CDS-L-elsbetiae_contig5631:3989..40861691683675.702694-CDS-L-elsbetiae_contig5631:3989..4086Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 3990..4086 -
1622816599.6257136-CDS-L-elsbetiae_contig5631:4640..47281622816599.6257136-CDS-L-elsbetiae_contig5631:4640..4728Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 4641..4728 -
1691683675.7148287-CDS-L-elsbetiae_contig5631:4640..47281691683675.7148287-CDS-L-elsbetiae_contig5631:4640..4728Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 4641..4728 -
1622816599.6394672-CDS-L-elsbetiae_contig5631:5405..55061622816599.6394672-CDS-L-elsbetiae_contig5631:5405..5506Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 5406..5506 -
1691683675.7265675-CDS-L-elsbetiae_contig5631:5405..55061691683675.7265675-CDS-L-elsbetiae_contig5631:5405..5506Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 5406..5506 -
1622816599.6495972-CDS-L-elsbetiae_contig5631:6492..65581622816599.6495972-CDS-L-elsbetiae_contig5631:6492..6558Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 6493..6558 -
1691683675.7361689-CDS-L-elsbetiae_contig5631:6492..65581691683675.7361689-CDS-L-elsbetiae_contig5631:6492..6558Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 6493..6558 -
1622816599.660882-CDS-L-elsbetiae_contig5631:6808..68531622816599.660882-CDS-L-elsbetiae_contig5631:6808..6853Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 6809..6853 -
1691683675.750333-CDS-L-elsbetiae_contig5631:6808..68531691683675.750333-CDS-L-elsbetiae_contig5631:6808..6853Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5631 6809..6853 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5631.13974.1

>prot_L-elsbetiae_contig5631.13974.1 ID=prot_L-elsbetiae_contig5631.13974.1|Name=mRNA_L-elsbetiae_contig5631.13974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=351bp
KAGRGGAALRALRLMVEQQLPVSQKQYVGAMEVCMRQGSWTSGLEVFRLL
LGDLRPRGLSPKQSTWKSLAKGLRAAGQADQGVAVLRQALKAGVRHIDEQ
VCSILLDLCAVKGRMGLAEEIVSLMETHRIPKGPVTYCVLLKGYGRQRRL
RGVDATMREMKERGVVPDVVALNAAVDAFVRCGELPKARKLLASMERSPG
GSLAQTLTYNTLIKGLGRELRVGEAFEVARGMADRGCLPNEVTINSLVDI
CVRSGDLDRAYNLLKNPTLLPSPAEAEAAAAAAAVSTSVSPTTPPAGGGD
WAGPIGEVEVEVGAADRVDSSRGKGGGYAAEKAPAEVESERAAAGAGAGA
T
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mRNA from alignment at L-elsbetiae_contig5631:516..6853-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5631.13974.1 ID=mRNA_L-elsbetiae_contig5631.13974.1|Name=mRNA_L-elsbetiae_contig5631.13974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6338bp|location=Sequence derived from alignment at L-elsbetiae_contig5631:516..6853- (Laminarionema elsbetiae ELsaHSoW15)
AAGGCCGGAAGGGGCGGAGCGGCCCTCCGGGCGCTTCGGTTGATGGTGAA
TTACCGTATGTAATTTATTTGCGGTTGGCTTGGCTGTTCAGGTGAAGGGC
TAATCGAGCTACGCGGACTGGTTGTGTCTTGGCCCTCCGATGCTCCCTGG
GGGCTTGCTCATTATTCTAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGATGTATGTTTGGTTTCTTTGTGCTCGCTCATTCTAGGTGTGTGTGTG
TGTGTGTGTGTTTTGTGTTTGGTTTCTTTGTGTTCCGCCCCCCAGGTGGA
GCAGCAGCTTCCGGTCAGCCAGAAGCAGTACGTGGGCGCGATGGAGGTGT
GCATGCGGCAGGTGAGGCAACACCCAGAGGTGCAGGCAGCGAGGAGGTGC
ATAGGTCGCGCCGGCTGATTCACTGAGGCTTGTGATGCCAGGAGCCGTGT
TAGGCGACGGAAATGTCTACAAAGTTGTTGTTGGTTCTCACATTAGCTCT
CTAGTAAAAACATCCTTGGGGGCCCGTGGTCACAAAACAAGGCACACTCG
ACACCGCGGAAGAAAAATAAAACAAACATAAGTATGGTACATACGCGCCC
GGCGGTACTAAACTGAGCCCCGGAGGGATCTTGCATGTCGCTGGCACAAA
TCTTCGTATGATAACTCGTCAGATGGAAGCCGGGGCTTGAAACTTTATTG
TGTTTGTTTTTAGAGGAGGTCAGAATGAGGGGCGCCGCCTTCATATATCT
ATCGCGGAGGGAGTGGATTGCGTTGTTTTGATAGTTCTGGCTGAGGAGCT
CTGTCGCCCTTGTTGGTTGATGTTTGTATGTATGTACGTACCGTAGGTGA
CACAAGATACCACACCCCTTGGACATATTTTCAAAGCTCGATTCCTCCCC
AGCAAGAAGAGTGCCAGTGCCGAAAGGGGTGGCATTGGAAAGATATAGTC
CAGGGCTGTCCGAAAATGTGCCGTTTGGTACCGGCACCCTCTTCGTTACA
GAGGAATGGAGCTCTAAAAGTCGGTCCAGGGGGGTGATATCTTGTGTCAC
CTACGGTACGCATCCGATCAGACGCATGTACGACGTTTTTCGTACACACG
TACTTCGTATATATCTTCATACGTCGCCCCCGTTTTTTTTTTTTTTTTTC
TGGTAGTCTCTTTTTTCCTTGACCGCCCTCACTCTCTCCATTCTGCTGCT
GTTCGGTATACATATGGCTTGATGTGACGCGGTGCATTGTTCGCTCATGG
GGTGTGTGGGGCTTAAACGGCACGCCCGGGGAATCAATACCGCAATGTAC
GACAATTACGACTTGCGACCATGAACGGCACGTGCGTACACGGGCAGGGC
TCGTGGACCTCCGGGCTGGAAGTGTTTCGGCTCCTCCTTGGAGACCTGCG
ACCCCGGGGGCTGAGCCCGAAGCAGTCCACGTGGAAATCTCTGGCAAAGT
GAGCACAGCGCAGCCCGCCTCTCTTTCCGTCCCCGCGTTTCTCTGCCTCC
CTCTCATGGAGGTGTACTGGATAAGGAGATCGGAACGGTTTTTAATGTGA
AGACAACACACACACACACACATATTCTTGCCTCTCGCCCTCTCTTGGTG
CGAAGTGTGTGGGTTCTGTTTTCTTATTAACTGGTGTTTTTTTTGCTGTC
AGCGAGCGGGGCCCGGTTTTCTGGGGGGGGGGGGGGATTGTGCCTTTTTT
TTGTGCTTGTGTGGTGGTTGTTCGGGCTTAGTTTTCTTCCCGCGACATGT
TTTCGCGCACAATCGTACGATCTCCGCCTTTGTTGTAGTGTCTAGAGTGT
CTTATTTTGTGCTGTGTGTGTGTTTGTTTGCCTTTCCAGGCATTAAGTTG
CATGCATGCAGTGCTTCTCTACCATACATGTGTTGCCGATTTGTGTATTG
CATAGCATGTCGTTTGCTCCCCGACACTTGCAGATAGACCCAATCAAATA
ACACTCAACATACACTGCGCGCATGGTCCATTAACACAGGCATGTGCTGA
TGCGTAAGTAGATTCGGACAAGCATTCCTCTCCTGAAGAGAAAGTTAATA
TTTCGATGCCATCAAAATGCTCAACTACGTGTAGATCTCCTCGGTTCCCT
AATTTTCATGGAATGTTTCTCTCAGGGGGCTCCGCGCAGCTGGGCAGGCA
GACCAGGGGGTGGCGGTGTTACGCCAGGCGCTCAAGGCGGGTGTACGGCA
CATCGACGAGCAGGCAAGTGTACACGCCTTTGCATTTGTTATCCTGCGGG
GCTCCCTGAAGACGCGCCGCGCCCCGTGCAGATGTTTACTCCACGACCTG
TCCTTTTTCGTTTTGCATATGATTTTGTGTGGCGCTGAACTTGATTTGTT
CGGTATTTCCACGTACACGCACTCTTTCCTCGCTCTTCTCTAGGCCCTGC
CGAGCTTATGTTTGCAGCACCATTGGGGCAATGCAGCCGAAGGAAGCAAG
ACAGCGCCATACACAGCAGTACTGCGTGCCTTTGACACGAGTTTATTTTC
GTATTATTATTGTCGCTGCACGCACGCCTAACTGCCCCCCCCCCCCCCCC
CCCCCCGACCAACAGCAACACCACACCAACCGGAGTCGCCTAGAGTTCAG
CCACGAGCACGCGTATTTAGTCAGTCACGGGGCCCCGCCTCCATTCCGTA
CCTTTAAATCGTGTCCTGCGACTTCCGGTACTTGGCCTCTGTTGCACTAC
GACTCCCCCCCCTCCGCCGCATTCACACTCGCGGAACCCCATCTCCGTTC
GTCCTTACCTTGTCCAGGTGTGCTCTATCCTGCTGGACCTGTGTGCGGTG
AAGGGACGCATGGGGCTGGCCGAAGAGATAGTATCCCTCATGGAAACCCA
CCGCATCCCTAAAGGTGAGAAGGGCAGACCTTAACGTTGTTTGCCCTACG
GCCCACGCCTAGGGTAGGTTCCATACCGGTTGTGCCCACGTTACCCCGCC
CCCCCCCCGGGGGGTACCCTGTTTTCAGTATCATTTTCTTCGTGCTAATG
GTAGTACATGTTGTATTTTGCTTTTGGTAGGCGTCAGAGCTTGAGGCTGT
GCGCATGGGACGTCAGTGTTTTTGTTGTTTAATCACCCACATAGAAAAAA
AACATATATATGTGTCTACTTCCGGCGGCGCCCTCCTCACTACTGTGTGG
AATCGCTCTTTCTTGATCTCGGAAAACATTTCCCTCTCATGCTTTGGGCG
CGAAACAAACACAAGCAAAAGTTCCCGCCTGGCCTTCTTTCATCCATTGC
AGAGGACGCAGGTATGTGTGTAGCCTGCAGGCGTGACACCTCCGTGCTAT
GTACTCGTTTTATCCCTCCGTGGGTGCGAGAAGAGCACCTCGCCCATCGA
CGTGATGGGAAGGGGGGTCGTCAGAGTGGTATTTGGGTGGGTATGTATCA
GCGCCAACGAAGCAGCGCCAAAACGACAAGTGTTTTTCCTTGCCCCCCCA
GGCCCCGTGACGTACTGCGTGCTGCTTAAGGGTTACGGCCGGCAGCGGCG
GCTTCGAGGGGTGGACGCTACGATGAGGGAGATGAAGGAGAGAGGCGTCG
TCCCCGACGTGGTCGCCCTCAACGCCGCGGTCGACGCTTTCGTCAGGTGA
GACCGACATCAGCAGCAGCGGCAACATCAGCAACAACAAAGGCAACAATA
ACCGCAGCTTGAGGTTATGTGTATTCCACAATTACGCAAGTATAAATCTA
ATATCTATTGAGAATTAACTTCCTGCAAGCAATGCATTTCGCCGGCTCTC
GATGGCTACGACCAGCATTTTGATTCTTCTCGAGCGCTTTACGACCAGCA
TTTCGATTCTTCCCGAGCGCTGCATTTATTGACCCATTGGGCGGAATTTA
AGGGCTTTGCACCGCCTCCCATCACCACTTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTTCTCTCTGTCGAACAACCCTACTGCTGCAAACCCTCCATA
GACAGTTTATCCTCCTCCTCTCTCTCTCTCTCTCTCTCTCCCTCTCGCTT
TCTGTCTCTGGCTCTGTCTCTGGCTGTCTGCATGGCTTCAGAAAGTCGGA
TTCAAATATCTCCCAGAGCAGTTTGGCTTTTTGAAAACAGTGTCGCAAAA
AAGACTGTACTCTTTCGACCTTTTTGTCTCTCTCTCTCCCTTTATCTCTC
TCTCTCTCTCTGACCACCCCCTACTGCTACACGCCCTCCACTGTTAATCT
CCTCTGCCTCTCTCTGTATGTACATTTCGATTCTTCCCGAGCGCTGCATT
TACTGACCCGTTGGGCGAAATTTAAGGCTTTGCACCGCCTCCCACCACCT
CTCTCTCTTTCTCTTCTCTCTCTCGAATAACCCCTACTGCTGCACACCCT
CCACAATTTATCCTCCTCTTCCTCTCTGTCTCTGTCTCTATTTCTGTCTC
TGTCTCTCTCTGGCTCTGGCTCTCTCTCTCTGCATGGCTTCAGAAAGTCG
GATTCAAATTTATCTCCCAGTGCAGTTTGGGTTTTTGAGAACACTATCGC
AAAAAAAGACTGCACCGCTTTCGCCCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTTTATCTATCTGACCATCCCCTACTGCT
ACACGCCCTCCACTGTTATTCTCCTCTGCCCCCCTCTCTCTCTCTCTCTC
TCTCTCTCTGTCTCTCTGTGTATGTATAAAGAGCAGTTGCATTTTTTAAT
TTTGATTCTCGCGTGAAAAACTGCCTCGCCCAAGGGGTCACCCGGCCAGC
CGTTTGTTCGTGTCACTGGAGCCGCACTATATGGTGCCACTGCCTACGTG
CTCCGATCTGCGTGTAATGTTGTGCACACGTGCGGATACACACTCGCGGC
AGCGCCGTCAAATACAAAGAGAGCAGCATTTCTGCTTGCACATGTGCACT
CTACACAAGGTCGCTGGTGGAAAAGTAGGTATTCGCCTGCCTGCTGACGT
GTTTTTCTCGAAAGTATAAAAAGCAACTAATGCTGTTCCCATTGCCACAC
TTAAGACACTGTTGTTCGACAACAGGAGCACTTTATATTATGGAAGAAAG
TATGATATTTATAATTGCCTTGGGCTCGTTTTCAAACAAGCGGGGCCGCG
TAGCGGCCACACCTTGTACGAAATATACTTTTACAACGACAACAACAACA
GCTTGATATTCTGTTTGTTGAACGATTACGCAAGTCTGTATACCTTTTCG
TATAAGTAGCTGTGTACCAGCGCCAGTTGATCTGAGGTCTCCGCCAGAGT
ACTGCTGTTTTTGGCGCCCCGAGGCTACTTTTCCAGTGAGTGCCCATTTT
CCTTCGTGCTCACGCGCCGCTCTCGTCGATCACCAGGCACACACCCGCAC
CCACACCCACACCCTCTCCGTGCCCCCTCGTTCTCCCCTCCCCGCCCCCT
CCACACCGCTCACAGATGTGGGGAGCTCCCGAAGGCGAGAAAACTCCTTG
CGTCGATGGAGCGGTCTCCGGGAGGATCGCTGGCGCAGACGCTGACGTAC
AACACTCTCATCAAGGGGCTCGGGAGGGAGCTGCGCGTGGGCGAGGCGTT
CGAGGTCGCCCGGGGCATGGCAGACCGGGGGTGCTTGCCTAACGAGGTAC
TTTCGGGTGCTGCTACTGCGGCTGAAGCTGCGGTTGTGGGCGTTTGGGAT
GGTTGTTCCATGGCGTTCGTGGCGTTAGGGCTAGCGACGTCGCGTGTGTG
ACTGCAGCACGAGAAGGTTTGGGGGTCGCACTTCTGCTTCTGCTGTTGGG
GGTCGCACTTCTGGGCGCGTTGGTTTTGTGTTTGTTCGTCAGTTCCCGAC
GAGGCAGTGAGTACCCCCAGGCCCCTCCGTCTAGGGTGGCAATTCGTTTA
TTGGAGGTTCAGCTGCGGGTCCAGCAGCATGTACACTGGTTGGTGTTCAC
GTTTCACGTTTCCCCTGTCTTATCCATATTTTCCATACCCCCTAACCCGA
CCTACGTCCCCCCCCCCCCTTGTTTCCTCTCTGTGTTCTGTCGTGTCGTG
TGTTAAGGTGACGATCAACTCCCTTGTAGATATTTGCGTGAGGTCCGGTG
ACCTGGACCGAGCGTACAACCTCCTCAAGAACCCCACCCTCTTGCCGTCC
CCGGCGGAGGCGGAGGCGGCGGCGGCGGCGGCGGCGGTATCGACGTCTGT
GTCGCCGACAACCCCGCCCGCCGGAGGCGGCGACTGGGCTGGGCCCATAG
GCGAGGTCGAAGTCGAGGTTGGAGCCGCCGACAGGGTGGATTCTTCGCGG
GGTAAGGGTGGCGGATACGCGGCTGAGAAGGCTCCCGCTGAGGTAGAAAG
CGAGAGAGCGGCGGCGGGAGCGGGAGCGGGAGCAACGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig5631:516..6853-

>mRNA_L-elsbetiae_contig5631.13974.1 ID=mRNA_L-elsbetiae_contig5631.13974.1|Name=mRNA_L-elsbetiae_contig5631.13974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2106bp|location=Sequence derived from alignment at L-elsbetiae_contig5631:516..6853- (Laminarionema elsbetiae ELsaHSoW15)
AAGGCCGGAAGGGGCGGAGCGGCCCTCCGGGCGCTTCGGTTGATGAAGGC
CGGAAGGGGCGGAGCGGCCCTCCGGGCGCTTCGGTTGATGGTGGAGCAGC
AGCTTCCGGTCAGCCAGAAGCAGTACGTGGGCGCGATGGAGGTGTGCATG
CGGCAGGTGGAGCAGCAGCTTCCGGTCAGCCAGAAGCAGTACGTGGGCGC
GATGGAGGTGTGCATGCGGCAGGGCTCGTGGACCTCCGGGCTGGAAGTGT
TTCGGCTCCTCCTTGGAGACCTGCGACCCCGGGGGCTGAGCCCGAAGCAG
TCCACGTGGAAATCTCTGGCAAAGGCTCGTGGACCTCCGGGCTGGAAGTG
TTTCGGCTCCTCCTTGGAGACCTGCGACCCCGGGGGCTGAGCCCGAAGCA
GTCCACGTGGAAATCTCTGGCAAAGGGGCTCCGCGCAGCTGGGCAGGCAG
ACCAGGGGGTGGCGGTGTTACGCCAGGCGCTCAAGGCGGGTGTACGGCAC
ATCGACGAGCAGGGGGCTCCGCGCAGCTGGGCAGGCAGACCAGGGGGTGG
CGGTGTTACGCCAGGCGCTCAAGGCGGGTGTACGGCACATCGACGAGCAG
GTGTGCTCTATCCTGCTGGACCTGTGTGCGGTGAAGGGACGCATGGGGCT
GGCCGAAGAGATAGTATCCCTCATGGAAACCCACCGCATCCCTAAAGGTG
TGCTCTATCCTGCTGGACCTGTGTGCGGTGAAGGGACGCATGGGGCTGGC
CGAAGAGATAGTATCCCTCATGGAAACCCACCGCATCCCTAAAGGCCCCG
TGACGTACTGCGTGCTGCTTAAGGGTTACGGCCGGCAGCGGCGGCTTCGA
GGGGTGGACGCTACGATGAGGGAGATGAAGGAGAGAGGCGTCGTCCCCGA
CGTGGTCGCCCTCAACGCCGCGGTCGACGCTTTCGTCAGGCCCCGTGACG
TACTGCGTGCTGCTTAAGGGTTACGGCCGGCAGCGGCGGCTTCGAGGGGT
GGACGCTACGATGAGGGAGATGAAGGAGAGAGGCGTCGTCCCCGACGTGG
TCGCCCTCAACGCCGCGGTCGACGCTTTCGTCAGATGTGGGGAGCTCCCG
AAGGCGAGAAAACTCCTTGCGTCGATGGAGCGGTCTCCGGGAGGATCGCT
GGCGCAGACGCTGACGTACAACACTCTCATCAAGGGGCTCGGGAGGGAGC
TGCGCGTGGGCGAGGCGTTCGAGGTCGCCCGGGGCATGGCAGACCGGGGG
TGCTTGCCTAACGAGATGTGGGGAGCTCCCGAAGGCGAGAAAACTCCTTG
CGTCGATGGAGCGGTCTCCGGGAGGATCGCTGGCGCAGACGCTGACGTAC
AACACTCTCATCAAGGGGCTCGGGAGGGAGCTGCGCGTGGGCGAGGCGTT
CGAGGTCGCCCGGGGCATGGCAGACCGGGGGTGCTTGCCTAACGAGGTGA
CGATCAACTCCCTTGTAGATATTTGCGTGAGGTCCGGTGACCTGGACCGA
GCGTACAACCTCCTCAAGAACCCCACCCTCTTGCCGTCCCCGGCGGAGGC
GGAGGCGGCGGCGGCGGCGGCGGCGGTATCGACGTCTGTGTCGCCGACAA
CCCCGCCCGCCGGAGGCGGCGACTGGGCTGGGCCCATAGGCGAGGTCGAA
GTCGAGGTTGGAGCCGCCGACAGGGTGGATTCTTCGCGGGGTAAGGGTGG
CGGATACGCGGCTGAGAAGGCTCCCGCTGAGGTAGAAAGCGAGAGAGCGG
CGGCGGGAGCGGGAGCGGGAGCAACGGTGACGATCAACTCCCTTGTAGAT
ATTTGCGTGAGGTCCGGTGACCTGGACCGAGCGTACAACCTCCTCAAGAA
CCCCACCCTCTTGCCGTCCCCGGCGGAGGCGGAGGCGGCGGCGGCGGCGG
CGGCGGTATCGACGTCTGTGTCGCCGACAACCCCGCCCGCCGGAGGCGGC
GACTGGGCTGGGCCCATAGGCGAGGTCGAAGTCGAGGTTGGAGCCGCCGA
CAGGGTGGATTCTTCGCGGGGTAAGGGTGGCGGATACGCGGCTGAGAAGG
CTCCCGCTGAGGTAGAAAGCGAGAGAGCGGCGGCGGGAGCGGGAGCGGGA
GCAACG
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