mRNA_L-elsbetiae_contig5629.13969.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5629.13969.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI) HSP 1 Score: 399 bits (1026), Expect = 6.680e-133 Identity = 199/248 (80.24%), Postives = 214/248 (86.29%), Query Frame = 3 Query: 132 ACAALSASANALTVVTPSSDLDVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGEWVTALCPYGENGCPDNEGDYDIVMPEPMMGTSGTGYKVRVMDVSDESEVDCSDAFTLIASPEAPFSSED--YSLTVTSPAAGDMAKAGEEYTVEFDYNNGVGSRVDRFDIDLYMADGTGDCGTYVTSICDKESIGCKDSMGDYDVEIPEDTPAGEYSIRVGRFEDKTLFGCSGTFMVEG-DDEDMSMSF 866 ACA L A ANAL VVTPS+DL VVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCG+WVTALCPYGE GCPDNEGDYDIVMPEPM G S +GYKVRVMDVSDE +DCSDAF L+AS +AP + + Y LTVTSPA GD A+AGEEYTVEFDY+NGVGS+VDRF IDLYMADG GDCGTYVTSICDK SIGCKDSMGDYDVEIP DT AG+Y IRVGRFED+ L+GCSGTF + G DDE MS F Sbjct: 10 ACAMLGA-ANALEVVTPSADLIVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIMGGDDESMSYDF 256
BLAST of mRNA_L-elsbetiae_contig5629.13969.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE) HSP 1 Score: 356 bits (913), Expect = 9.690e-116 Identity = 182/259 (70.27%), Postives = 203/259 (78.38%), Query Frame = 3 Query: 132 ACAALSASANALTVVTPSSDLDVVADRTYTVEWTGADS-GRFEIDLYHCGSMCMEDSCGEWVTALCPYGENGCPDNEGDYDIVMPEPMMGTSGTGYKVRVMDVSDESEVDCSDAFTLIASPEAPFSSEDY--SLTVTSPAAGDMAKAGEEYTVEFDYNNGVGSRVDRFDIDLYMADGTGDCGTYVTSICDKESIGCKDSMGDYDVEIPEDTPAGEYSIRVGRFEDKTLFGCSGTFMVE-GDDED--------MSMSFRF 872 AC L A ANAL V TPS L V+ADRTYTVEWTG S RFEIDLY+CGSMCMED CG+WVTALCPYGE+GCPDNEGDYDIVMPEPM+GTSG+GYKVRV D+ DE + DCSD F L+AS EAP ++ +L VTSPA+GD+A EYTVEFDY+NGVGS VDRF IDLY ADG GDCGTYV SICDK +IGCKDSMGDYDVEIP DT AGEY IRV RFED +L+ CSGTF +E GDD D S+S+RF Sbjct: 10 ACGMLGA-ANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTIEEGDDSDXXXXXEDAFSLSYRF 267
BLAST of mRNA_L-elsbetiae_contig5629.13969.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE) HSP 1 Score: 331 bits (848), Expect = 3.920e-106 Identity = 167/250 (66.80%), Postives = 197/250 (78.80%), Query Frame = 3 Query: 132 ACAALSASANALTVVTPSSDLDVVADRTYTVEWTGADSG-RFEIDLYHCGSMCMEDSCGEWVTALCPYGENGCPDNEGDYDIVMPEPMMGTSGTGYKVRVMDVSDESEVDCSDAFTLIASPEAPFSSEDYS--LTVTSPAAGDMAKAGEEYTVEFDYNNGVGSRVDRFDIDLYMADGTGDCGTYVTSICDKESIGCKDSMGDYDVEIPEDTPAGEYSIRVGRFEDKTLFGCSGTFMVEGDDEDMSMSFRF 872 AC L A+AL VVTP++ VV+ R YTVEW+G S RFEIDLY+C SMCMED CGEWVTALCPYGE+GCPDNEGDYDIVMPEPM GTSG+GYKVRV DV DE DCSD F L+A +AP +S+ +TVTSP+ GD A+AGEEYTVEFDY+NG+GS V RF IDLY A G+GDCGT++ ++CDK +IGCKDSMGDYDVEIPED AG Y+IRVG FED++++GCS F + G D D SMS+RF Sbjct: 11 ACGMLGV-ASALEVVTPAAGDMVVSSRAYTVEWSGTGSNKRFEIDLYYCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEILGAD-DSSMSYRF 258
BLAST of mRNA_L-elsbetiae_contig5629.13969.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE) HSP 1 Score: 327 bits (837), Expect = 1.510e-104 Identity = 159/241 (65.98%), Postives = 190/241 (78.84%), Query Frame = 3 Query: 153 SANALTVVTPSSDLDVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGEWVTALCPYGENGCPDNEGDYDIVMPEPMMGTSGTGYKVRVMDVSDESEVDCSDAFTLIASPEAPFSSE-DYSLTVTSPAAGDMAKAGEEYTVEFDYNNGVGSRVDRFDIDLYMADGTGDCGTYVTSICDKESIGCKDSMGDYDVEIPEDTPAGEYSIRVGRFEDKTLFGCSGTFMVEGDDEDMSMSFRF 872 +ANAL VV+P + V+ADR YTVEWTG +GRFEIDLY+C S CM+D CG+WVTALCPYG +GCPD+ GDYDI+MPEPM GTS +GYKV V + DES++ CSD FTLIAS +AP + E YSLTVTSP+ GD A AGE YTVE+DY NG GS DRF +DLY+ GTGDCGTYVT++CD+ SIGC DS GDYDVEIP DTPAG YSIRVG F+D+ ++ CS TF V+ D DM++S RF Sbjct: 16 AANALEVVSPDGGISVLADRAYTVEWTGTTTGRFEIDLYYCNSFCMDDVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTS-SGYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEMGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEVDTSD-DMTISMRF 254
BLAST of mRNA_L-elsbetiae_contig5629.13969.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI) HSP 1 Score: 323 bits (829), Expect = 4.880e-103 Identity = 161/244 (65.98%), Postives = 191/244 (78.28%), Query Frame = 3 Query: 153 SANALTVVTPSSDLDVVADRTYTVEWTGADSG-RFEIDLYHCGSMCMEDSCGEWVTALCPYGENGCPDNEGDYDIVMPEPMMGTSGTGYKVRVMDVSDESEVDCSDAFTLIASPEAPFSSEDYS--LTVTSPAAGDMAKAGEEYTVEFDYNNGVGSRVDRFDIDLYMADGTGDCGTYVTSICDKESIGCKDSMGDYDVEIPEDTPAGEYSIRVGRFEDKTLFGCSGTFMVEG-----DDEDMSM 860 +A+AL VVTP+ VVA R YTVEWTG S R+EIDLY+CGSMCMED CG+WVTALCPYGE+GCPDNEGDYDIVMPEPM GTSG+GYKVRV DV D+ DCSD F L+A EAP + + +TVTSP++GD A+AGEEYTVEFDY+NG+GS V RF IDLY A G+GDCGT++ ++CDK +IGCKDSMGDYDVEIPED AG Y+IRVG FED +++GCS F + G DD D+ M Sbjct: 4 AASALEVVTPAEGDIVVASRAYTVEWTGTGSNNRYEIDLYYCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEILGADDSPDDGDLDM 247
BLAST of mRNA_L-elsbetiae_contig5629.13969.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI) HSP 1 Score: 318 bits (815), Expect = 2.940e-101 Identity = 158/238 (66.39%), Postives = 182/238 (76.47%), Query Frame = 3 Query: 153 SANALTVVTPSSDLDVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGEWVTALCPYGENGCPDNEGDYDIVMPEPMMGTSGTGYKVRVMDVSDESEVDCSDAFTLIASPEAPFSSE-DYSLTVTSPAAGDMAKAGEEYTVEFDYNNGVGSRVDRFDIDLYM-ADGTGDCGTYVTSICDKESIGCKDSMGDYDVEIPEDTPAGEYSIRVGRFEDKTLFGCSGTFMVEGDDEDMSM 860 +ANAL VV+P++ + V+ADRTYTVEWTG RFEIDLY+CGS CMED CG+WVTALCPYG +GCPD +GDYDIVMPEPM GTS +GYKV V D +DES + CS FTL+AS +AP + E YSLTVTSP+ GD A AG YTVE+DY NG+GS DRF IDLY GTGDCGTYV ++CDK SIGC DS GDYDVEIP DTPAG YS+RVG F D +F CS F + D DMSM Sbjct: 16 AANALEVVSPAAGISVIADRTYTVEWTGTSDSRFEIDLYYCGSFCMEDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTS-SGYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIVNDRTDMSM 252
BLAST of mRNA_L-elsbetiae_contig5629.13969.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI) HSP 1 Score: 314 bits (804), Expect = 1.210e-99 Identity = 158/241 (65.56%), Postives = 192/241 (79.67%), Query Frame = 3 Query: 153 SANALTVVTPSSDLDVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGEWVTALCPYGENGCPDNEGDYDIVMPEPMMGTSGTGYKVRVMDVSDESEVDCSDAFTLIASPEAPFSSEDYS-LTVTSPAAGDMAKAGEEYTVEFDYNNGVGSRVDRFDIDLYMADGTGDCGTYVTSICDKESIGCKDSMGDYDVEIPEDTPAGEYSIRVGRFEDKTLFGCSGTFMVEGDDEDMSMSFRF 872 +ANAL VV+P++ VVAD YTVEWTGA SGR++IDLY+CGS+CMED CG+WVTALCPYG++GCPD +GDYD+VMPEPM GTS +GYKV V D SDES+ CS FTLIAS EAP +++ + ++VTSP+ GD A AG EYTVEFDY+NG+GS V+RF IDLY + G+GDCGTYVT+ICDK SIGCKDS GDYDV IP T +G YSIRVG FED ++GCS +F + G + SMS RF Sbjct: 16 AANALEVVSPAAGDMVVADSAYTVEWTGATSGRYDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTS-SGYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDMGAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIVGGE---SMSVRF 252
BLAST of mRNA_L-elsbetiae_contig5629.13969.1 vs. uniprot
Match: D7FH21_ECTSI (Imm downregulated 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH21_ECTSI) HSP 1 Score: 291 bits (744), Expect = 7.850e-91 Identity = 153/227 (67.40%), Postives = 172/227 (75.77%), Query Frame = 3 Query: 132 ACAALSASANALTVVTPSSDLDVVADRTYTVEWTGADS-GRFEIDLYHCGSMCMEDSCGEWVTALCPYGENGCPDNEGDYDIVMPEPMMGTSGTGYKVRVMDVSDESEVDCSDAFTLIASPEAPFSSEDY--SLTVTSPAAGDMAKAGEEYTVEFDYNNGVGSRVDRFDIDLYMADGTGDCGTYVTSICDKESIGCKDS----MGDYDVEIPEDTPAGEYSIRVGRF 791 AC L A ANAL V TPS L V+ADRTYTVEWTG S RFEIDLY+CGSMCMED CG+WVTALCPYGE+GCPDNEGDYDIVMPEPM GTSG+GYKVRV D+ DE + DCSD F LIAS EAP ++ +L VTSPA+GD+A EYTVEFDY+NGVGSRVDRF IDLY ADG GDCGTYV SICDK +IGCKDS G + V+ G +S+ V R+ Sbjct: 11 ACGMLGA-ANALKVSTPSKGLTVIADRTYTVEWTGTSSDNRFEIDLYYCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVWDIHDEEDADCSDEFYLIASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSRVDRFAIDLYRADGDGDCGTYVQSICDKPTIGCKDSNPVRRGRWRVQDSGGPLRGRFSLLVLRY 236
BLAST of mRNA_L-elsbetiae_contig5629.13969.1 vs. uniprot
Match: A0A6H5KP11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP11_9PHAE) HSP 1 Score: 269 bits (688), Expect = 2.270e-82 Identity = 136/237 (57.38%), Postives = 164/237 (69.20%), Query Frame = 3 Query: 159 NALTVVTPSSDLDVVADRTYTVEWTGADSGRFEIDLYHCGSMCMEDSCGEWVTALCPYGENGCPDNEGDYDIVMPEPMMGTSGTGYKVRVMDVSDESEVDCSDAFTLIASPEAPFSSEDYSLTVTSPAAGDMAKAGEEYTVE-FDYNNGVGSRVDRFDIDLYMADGTGDCGTYVTSICDKESIGCKDSMGDYDVEIPEDTPAGEYSIRVGRFEDKTLFGCSGTFMVEGDDEDMSMSF 866 NAL V +P++ +VA + TVEWTG SGRF+IDLY+CGS+CMED CG+WVTALCPYG++GCPD +GDYD+VMPEPM GTS +GYKV V D SDES++ CS FTL+AS FD++NG GS V+RF IDLYM+ G+GDCGTYVTSICDK SIGCKDS GDYDV IP DT +G YSIRVG FED +FGCS +F + G + MS+ F Sbjct: 18 NALEVTSPAAGDMIVAASSTTVEWTGTSSGRFDIDLYYCGSVCMEDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPMDGTS-SGYKVMVTDSSDESDMGCSGEFTLVASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDHDNGFGSSVNRFSIDLYMSGGSGDCGTYVTSICDKSSIGCKDSQGDYDVVIPSDTESGMYSIRVGVFEDPDVFGCSDSFEIIGGESSMSVRF 253
BLAST of mRNA_L-elsbetiae_contig5629.13969.1 vs. uniprot
Match: A0A6H5JEJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ8_9PHAE) HSP 1 Score: 271 bits (694), Expect = 4.510e-80 Identity = 133/186 (71.51%), Postives = 147/186 (79.03%), Query Frame = 3 Query: 288 MEDSCGEWVTALCPYGENGCPDNEGDYDIVMPEPMMGTSGTGYKVRVMDVSDESEVDCSDAFTLIASPEAPF--SSEDYSLTVTSPAAGDMAKAGEEYTVEFDYNNGVGSRVDRFDIDLYMADGTGDCGTYVTSICDKESIGCKDSMGDYDVEIPEDTPAGEYSIRVGRFEDKTLFGCSGTFMVEG 839 +ED CGEWVTALCPYG GCPDNEGDYDIVMPEPM GTSG+GYKVRV DV + DCSD F L+AS EAP + L VTSP+AGD A+AG EYTVEFDY+NGVGSRVDRF IDLY GTGDCGT+V ++CDKE+IGCKDSMGDYDVEIPE G YSIRVGRFED L+GCSG F + G Sbjct: 12 VEDECGEWVTALCPYGSEGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDGPQDADCSDEFYLMASAEAPVVGGPDAPYLMVTSPSAGDKAQAGGEYTVEFDYDNGVGSRVDRFKIDLYSIGGTGDCGTWVMNLCDKEAIGCKDSMGDYDVEIPETVVDGMYSIRVGRFEDDALYGCSGEFEIVG 197 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5629.13969.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5629.13969.1 >prot_L-elsbetiae_contig5629.13969.1 ID=prot_L-elsbetiae_contig5629.13969.1|Name=mRNA_L-elsbetiae_contig5629.13969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp MARTAFVALACAALSASANALTVVTPSSDLDVVADRTYTVEWTGADSGRFback to top mRNA from alignment at L-elsbetiae_contig5629:7834..11533- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5629.13969.1 ID=mRNA_L-elsbetiae_contig5629.13969.1|Name=mRNA_L-elsbetiae_contig5629.13969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3700bp|location=Sequence derived from alignment at L-elsbetiae_contig5629:7834..11533- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5629:7834..11533- >mRNA_L-elsbetiae_contig5629.13969.1 ID=mRNA_L-elsbetiae_contig5629.13969.1|Name=mRNA_L-elsbetiae_contig5629.13969.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1542bp|location=Sequence derived from alignment at L-elsbetiae_contig5629:7834..11533- (Laminarionema elsbetiae ELsaHSoW15)back to top |