prot_L-elsbetiae_contig5626.13966.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5626.13966.1
Unique Nameprot_L-elsbetiae_contig5626.13966.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length433
Homology
BLAST of mRNA_L-elsbetiae_contig5626.13966.1 vs. uniprot
Match: D7FNH7_ECTSI (Tetracycline-efflux transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH7_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 2.980e-118
Identity = 217/355 (61.13%), Postives = 246/355 (69.30%), Query Frame = 0
Query:    1 MSQVYPKIILLSFEGDDGEASEYRGWLAAGVSVVQLLFVPALSGSSDTFGRRALIYFALALHAGSVFALAAVVNSGSLAWVSACRLVTSVCVVILPVSQAVMIDLAAGGGKDATHGLGIAFGAFALGNSAGDIVGGSLAEHHRGAACLVSGALATAALLSLAAFGWKETAPS--SEKGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDATASANDDRWAEGGDGESGRGGSTKRGGKAKLLSPLFVLRVFLESRVLLRIACSYFLFVLSLNVFAAGYNYLDYRFHWTPPEISYFFATYNILMAFVGGWAIRGIVPKRLSEENGALFGIFVQV 353
            M+QVYPKIILLS  GDDGEAS+YRGWLAAGVSV+QL+FVPA+SG SD  GR+A++ FA  LHAGSV ALAA+ +S  LAW + CRL TSVC+VILPVSQA+MIDL+   GK ATHGLGIAFGA ALG SAGDI+GGSL EHHRGAACLVS A + A+LLSLA FGW+ETAP    E  +R                                                  +ATAS +   W + G   +G  G  +R G+ K L+PL VL+VFLESR LLRIACSYFLFVLSLNVFA GYNY+DYRF WTP EISYFFATYNILMA  GGW IR IVPKRL+EE GALFGI VQV
Sbjct:   90 MTQVYPKIILLSCGGDDGEASKYRGWLAAGVSVIQLIFVPAISGWSDVVGRKAVVCFAQVLHAGSVLALAAMADS--LAWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGASALGFSAGDIIGGSLTEHHRGAACLVSAAFSAASLLSLALFGWRETAPPLVGEGWQRWLWWRVEEQERIDDAVVGMNDDDDVGANRGICGRDVAAVVQGGDAV----EATASVDSFVWDDDGKQGAGGRGRARRSGR-KQLNPLSVLKVFLESRALLRIACSYFLFVLSLNVFATGYNYVDYRFGWTPSEISYFFATYNILMALAGGWVIRFIVPKRLTEEKGALFGISVQV 437          
BLAST of mRNA_L-elsbetiae_contig5626.13966.1 vs. uniprot
Match: A0A6H5L7V6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7V6_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 1.320e-70
Identity = 128/171 (74.85%), Postives = 144/171 (84.21%), Query Frame = 0
Query:    1 MSQVYPKIILLSFEGDDGEASEYRGWLAAGVSVVQLLFVPALSGSSDTFGRRALIYFALALHAGSVFALAAVVNSGSLAWVSACRLVTSVCVVILPVSQAVMIDLAAGGGKDATHGLGIAFGAFALGNSAGDIVGGSLAEHHRGAACLVSGALATAALLSLAAFGWKETAP 171
            M+QVYPKIILLS  GDDGEAS+YRGWLAAGVSV+QLLFVPA+SGSSD  GR+ ++ FA  LHA SV ALAA+ +S  L W + CRL TSVC+VILPVSQA+MIDL+   GK ATHGLGIAFGA ALG SAGDI+GGSLAEHHRGAACLVS A ATA+LLSL  FGW+ETAP
Sbjct:   50 MTQVYPKIILLSSGGDDGEASKYRGWLAAGVSVIQLLFVPAISGSSDVVGRKVVVCFAQVLHASSVLALAAMADS--LVWATVCRLATSVCIVILPVSQAIMIDLSPDRGKGATHGLGIAFGACALGFSAGDIIGGSLAEHHRGAACLVSAAFATASLLSLMLFGWRETAP 218          
BLAST of mRNA_L-elsbetiae_contig5626.13966.1 vs. uniprot
Match: D7FNH6_ECTSI (Major facilitator transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH6_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 2.040e-62
Identity = 145/359 (40.39%), Postives = 200/359 (55.71%), Query Frame = 0
Query:    1 MSQVYPKIILLSFEGDDGEASEYRGWLAAGVSVVQLLFVPALSGSSDTFGRRALIYFALALHAGSVFALAAVVNSGSLAWVSACRLVTSVCVVILPVSQAVMIDL----AAGGGKDATHGLGIAFGAFALGNSAGDIVGGSLAEHHRGAACLVSGALATAALLSLAAFGWKETAPSSEKGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDATASANDDRWAEGGDGESGRGGSTK---RGGKAKLLSPLFVLRVFLESRVLLRIACSYFLFVLSLNVFAAGYNYLDYRFHWTPPEISYFFATYNILMAFVGGWAIRGIVPKRLSEENGALFGIFVQ 352
            +SQVYPK++L  F+ D+GEAS + GWL     +VQL+ +P L G+SD  GRRA++  ALAL A S F+L   +   S+A VS C++V+ V   ILP+SQAV+IDL    AA GG + THGLG+   AF L  S G ++GGSL E H G AC +S +++   +LSL  FGW+ETAP++ +G                                                   G ATA+A            S  GG  K   RG  +++++P  VL+VFLES +L+++A     F LSLNVF+  YNY D+R+HW+P +IS FF+T+ IL+A   G  IR +VPKRLS   G L G+ +Q
Sbjct:   67 ISQVYPKVVLEHFDHDNGEASRFTGWLTLVSCIVQLIAIPTLCGASDVIGRRAILAGALALTAVSSFSLG--LAPSSIAVVSVCQVVSGVANAILPISQAVVIDLSHWGAAAGGGEVTHGLGLIGAAFGLAVSVGPVLGGSLTEDHAGTACWLSASMSVLGVLSLKFFGWEETAPAATQGA--------------------------------------------------GGATANA------------SAGGGWKKLCARGSSSRIVNPFSVLKVFLESSLLMQLAVVLACFSLSLNVFSVYYNYFDFRYHWSPLDISLFFSTFGILLALTSGLLIRFLVPKRLSVGRGVLLGLALQ 361          
BLAST of mRNA_L-elsbetiae_contig5626.13966.1 vs. uniprot
Match: A0A835YXD6_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD6_9STRA)

HSP 1 Score: 107 bits (266), Expect = 3.710e-21
Identity = 93/366 (25.41%), Postives = 142/366 (38.80%), Query Frame = 0
Query:    2 SQVYPKIILLSFEGDDGEASEYRGWLAAGVSVVQLLFVPALSGSSDTFGRRALIYFALALHAGSVFALAAVVNSGSLAWVSACRLVTSVCVVILPVSQAVMIDLAAGGGKDATHGLGIAFGAFALGNSAGDIVGGSLAEHHRGAACLVSGALATAA--------------LLSLAAFGWKET-APSSEKGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDATASANDDRWAEGGDGESGRGGSTKRGGKAKLLSPLFVLRVFLESRVLLRIACSYFLFVLSLNVFAAGYNYLDYRFHWTPPEISYFFATYNILMAFVGGWAIRGIVPKRLSEENGALFGIFVQ 352
            +QVYPK++L  + GDDG+ + + GW++ G S++Q +  P+L+ S D  GRR L+  A    A   F      N+  LA  +A  ++T +C V++PVSQA++ D+    G  A HG G+  G F LG   G ++GG L   HR AAC  +   A  A              LL    +GW+ET  P +    R                                                 G  +A+                       G  +                    AC YF    ++  F + Y  LDYRF W P +I  F A + + +  V    IR +VP+ +++      G+ +Q
Sbjct:  205 AQVYPKVVLSYYGGDDGKTASFLGWVSGGSSMLQFVLSPSLTASCDVRGRRGLLLAAAGAQALICFIWGFSPNNIGLA--AAVAVITGMCGVVIPVSQAIISDVTRHDGAAAAHGFGVIAGTFGLGLCIGPLLGGWLTNVHRPAACFTAAGAALLAHCWWRWWAGTALLALLVATVWGWEETYVPDAADASRAALRRSMSSTRYHWQVVNPVAIIGTVLHKRRTRRLPSAAQAARAQTVVSGPLSAA-----------------------GCTRXXXXXXXXXXXXXXXXXXXXACVYFCACTAIGSFNSWYTLLDYRFGWGPVQIGAFCAAFGLGITAVQSLVIRAVVPRLMTQARAVPVGMAIQ 545          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5626.13966.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FNH7_ECTSI2.980e-11861.13Tetracycline-efflux transporter n=1 Tax=Ectocarpus... [more]
A0A6H5L7V6_9PHAE1.320e-7074.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNH6_ECTSI2.040e-6240.39Major facilitator transporter n=2 Tax=Ectocarpus T... [more]
A0A835YXD6_9STRA3.710e-2125.41Major facilitator superfamily domain-containing pr... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 25..333
e-value: 6.6E-18
score: 64.8
NoneNo IPR availablePANTHERPTHR23504FAMILY NOT NAMEDcoord: 19..353
NoneNo IPR availablePANTHERPTHR23504:SF31MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10coord: 19..353
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..275
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..101
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 301..311
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 332..433
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 276..300
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 102..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 312..331
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22
NoneNo IPR availableTMHMMTMhelixcoord: 25..44
NoneNo IPR availableTMHMMTMhelixcoord: 276..298
NoneNo IPR availableTMHMMTMhelixcoord: 81..103
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 313..335
NoneNo IPR availableTMHMMTMhelixcoord: 144..166
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 21..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5626contigL-elsbetiae_contig5626:2064..7653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5626.13966.1mRNA_L-elsbetiae_contig5626.13966.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5626 2055..7653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5626.13966.1 ID=prot_L-elsbetiae_contig5626.13966.1|Name=mRNA_L-elsbetiae_contig5626.13966.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=433bp
MSQVYPKIILLSFEGDDGEASEYRGWLAAGVSVVQLLFVPALSGSSDTFG
RRALIYFALALHAGSVFALAAVVNSGSLAWVSACRLVTSVCVVILPVSQA
VMIDLAAGGGKDATHGLGIAFGAFALGNSAGDIVGGSLAEHHRGAACLVS
GALATAALLSLAAFGWKETAPSSEKGRRRQRRRRWCWRWSSCFCPEEKHE
EEWGVGGEAGAGSSTNRESTRSRDADSGDATASANDDRWAEGGDGESGRG
GSTKRGGKAKLLSPLFVLRVFLESRVLLRIACSYFLFVLSLNVFAAGYNY
LDYRFHWTPPEISYFFATYNILMAFVGGWAIRGIVPKRLSEENGALFGIF
VQVCLALEPDPYSHSTRIRGYAAGANAARAVYNNEKPRETPSPSLEINSA
TFSSAWLGRQRGWALVYEVPVPPPPRSPIPERR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR036259MFS_trans_sf