mRNA_L-elsbetiae_contig5623.13964.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5623.13964.1 vs. uniprot
Match: A0A6H5KJQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJQ3_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.460e-25 Identity = 97/113 (85.84%), Postives = 105/113 (92.92%), Query Frame = 3 Query: 138 MAEPDAEALRKELTMVKDKAKAYIGKLNEEKAALAKELNDKSTVLAGXXXXXXXXXXXXXXXXXXXXXXXXDQVKDRDGRLLRAKELLQSKLASKDQELEVARAEAKTLKEQA 476 MAEPDA ALRKEL MVKDKAKAYI KLNEEKAALAKEL DKS VLA XXXXXXXXXXXXXXXXXXXXXXX DQVKDRDGRLLRA+ELLQ+KLA+KD+EL+ A+AEAKTL++QA Sbjct: 1 MAEPDAAALRKELAMVKDKAKAYISKLNEEKAALAKELQDKSNVLAXXXXXXXXXXXXXXXXXXXXXXXXEDQVKDRDGRLLRAEELLQAKLAAKDEELQAAQAEAKTLRDQA 113
BLAST of mRNA_L-elsbetiae_contig5623.13964.1 vs. uniprot
Match: D8LSM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM5_ECTSI) HSP 1 Score: 105 bits (263), Expect = 6.420e-20 Identity = 86/99 (86.87%), Postives = 93/99 (93.94%), Query Frame = 3 Query: 180 MVKDKAKAYIGKLNEEKAALAKELNDKSTVLAGXXXXXXXXXXXXXXXXXXXXXXXXDQVKDRDGRLLRAKELLQSKLASKDQELEVARAEAKTLKEQA 476 MVKDKAK YI KLNEEKAALAKEL DKS VLAG XXXXXXXXXXXXXXXXXXXXXXXDQVKDRDGRLLRAKELLQ+KLA+KD+EL+ A+AEAKTL++QA Sbjct: 1 MVKDKAKTYISKLNEEKAALAKELQDKSNVLAGVXXXXXXXXXXXXXXXXXXXXXXXDQVKDRDGRLLRAKELLQAKLAAKDEELQAAQAEAKTLRDQA 99 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5623.13964.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5623.13964.1 >prot_L-elsbetiae_contig5623.13964.1 ID=prot_L-elsbetiae_contig5623.13964.1|Name=mRNA_L-elsbetiae_contig5623.13964.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=561bp MAEPDAEALRKELTMVKDKAKAYIGKLNEEKAALAKELNDKSTVLAGVKDback to top mRNA from alignment at L-elsbetiae_contig5623:1689..9802+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5623.13964.1 ID=mRNA_L-elsbetiae_contig5623.13964.1|Name=mRNA_L-elsbetiae_contig5623.13964.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8114bp|location=Sequence derived from alignment at L-elsbetiae_contig5623:1689..9802+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5623:1689..9802+ >mRNA_L-elsbetiae_contig5623.13964.1 ID=mRNA_L-elsbetiae_contig5623.13964.1|Name=mRNA_L-elsbetiae_contig5623.13964.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3366bp|location=Sequence derived from alignment at L-elsbetiae_contig5623:1689..9802+ (Laminarionema elsbetiae ELsaHSoW15)back to top |