mRNA_L-elsbetiae_contig5622.13962.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5622.13962.1 vs. uniprot
Match: A0A6H5JVE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE3_9PHAE) HSP 1 Score: 431 bits (1107), Expect = 6.130e-150 Identity = 222/242 (91.74%), Postives = 231/242 (95.45%), Query Frame = 1 Query: 10 MIRNVLVMKSGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVAVTLVGNEATNTFCALFHDRGDGATFGRLIASEMLNAFLEEHAKDIIEASSLNLKDFRAFKYRIPGIARKSVQPVLGKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAQAGNGCVSMSLESSTNSRILVWRIDVWTLVIAVHKSANRNRYQKHIDEALGVLHKVLELTST 735 MIRNVLVMKSGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELT V VTLVGNEATNTFCALFHDRGDGATFGRLIASE+LNAFLE HAKDI EASSLNLKDF AFKYRIPGI RKSVQPVLGKLVHVKGILRC LVTETSETFQTAEIDQLGLLANLQAL+ +STDIMAQAGNGCVSMSLESS+NSRIL+WRID WTLV+AVHK+ANRNRYQKHIDEA+GVL KVL+LT T Sbjct: 1 MIRNVLVMKSGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTSVGVTLVGNEATNTFCALFHDRGDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIVRKSVQPVLGKLVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVMAVHKAANRNRYQKHIDEAVGVLQKVLDLTIT 242
BLAST of mRNA_L-elsbetiae_contig5622.13962.1 vs. uniprot
Match: D7FUY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY6_ECTSI) HSP 1 Score: 389 bits (999), Expect = 3.210e-133 Identity = 203/218 (93.12%), Postives = 208/218 (95.41%), Query Frame = 1 Query: 1 GLAMIRNVLVMKSGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVAVTLVGNEATNTFCALFHDRGDGATFGRLIASEMLNAFLEEHAKDIIEASSLNLKDFRAFKYRIPGIARKSVQPVLGKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAQAGNGCVSMSLESSTNSRILVWRIDVWTLVIAVHK 654 GL MIRNVLVMKSGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGV VTLVGNEATNTFCALFHDR DGATFGRLIASE+LNAFLE HAKDI EASSLNLKDF AFKYRIPGI RKSVQPVLGKLVHVKGILRC LVTETSETFQTAEIDQLGLLANLQAL+ +STDIMAQAGNGCVSMSLESS+NSRIL+WRID WTLVIAVHK Sbjct: 85 GLDMIRNVLVMKSGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVGVTLVGNEATNTFCALFHDREDGATFGRLIASEILNAFLEAHAKDIKEASSLNLKDFMAFKYRIPGIVRKSVQPVLGKLVHVKGILRCVLVTETSETFQTAEIDQLGLLANLQALVGISTDIMAQAGNGCVSMSLESSSNSRILIWRIDAWTLVIAVHK 302
BLAST of mRNA_L-elsbetiae_contig5622.13962.1 vs. uniprot
Match: A0A835YZ72_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ72_9STRA) HSP 1 Score: 233 bits (594), Expect = 1.240e-72 Identity = 123/242 (50.83%), Postives = 175/242 (72.31%), Query Frame = 1 Query: 10 MIRNVLVMKS-GLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVAVTLVGNEATNTFCALFHDRGDGATFGRLIASEMLNAFLEEHAKDIIEASSLNLKDFRAFKYRIPGIARKSVQPVLGKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAQAGNGCVSMSLESST--NSRILVWRIDVWTLVIAVHKSANRNRYQKHIDEALGVLHKVLEL 726 MIR V++M S GLVLF +++ ++++QPR++GSLL AM+EFS V AGM V+Y+ELTG+ VT+V NEA FCALF DR DGA FGRL+A+E+L F +E+A ++ A+ LNL DF F ++ +++ QPVLG+LV G+L+ L+TE+S+TFQTA+IDQLGLLANL AL LSTDIMA G+ +++LE NSR+LVWR++ TLV+A ++ YQ +DEA+ +L ++ + Sbjct: 1 MIRTVIIMSSSGLVLFIKQYVHSIRQPRMVGSLLIAMLEFSMVTAGMPVSYIELTGLGVTVVWNEAAKVFCALFLDREDGADFGRLLATEILAGFQDEYANELGSAA-LNLVDFSGFHSKLLDAIQRTAQPVLGRLVQAHGVLKAVLITESSQTFQTADIDQLGLLANLGALAGLSTDIMAHCGDSVRTLTLEGDARGNSRVLVWRVEQSTLVVAASRAVTPAHYQPAVDEAVDMLLRLARV 241
BLAST of mRNA_L-elsbetiae_contig5622.13962.1 vs. uniprot
Match: A0A7R9UFX6_9STRA (Hypothetical protein n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9UFX6_9STRA) HSP 1 Score: 228 bits (582), Expect = 8.540e-71 Identity = 122/242 (50.41%), Postives = 169/242 (69.83%), Query Frame = 1 Query: 10 MIRNVLVMK-SGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVAVTLVGNEATNTFCALFHDRGDGATFGRLIASEMLNAFLEEHAKDIIEASSLNLKDFRAFKYRIPGIARKSVQPVLGKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAQAGNGCVSMSLESSTNSRILVWRIDVWTLVIAVHKSANRNRYQKHIDEALGVLHKVLELTS 732 MIRNVL+M SGLVLFS+EF N V QPRL+GSLLT MVEFS +AAGM ++Y+EL GV+VT+V +EA FCALFHDR DG TFGRLI +EML F++ + +I + NLKDF + I R +V PVL K+ +G++ L+TE +E ++D++G+LANLQ L+S +TDI+A + C+ ++LE S++SRIL+WRID LV++V K N +Y+ ++EA +L KV+ L S Sbjct: 1 MIRNVLMMATSGLVLFSQEFVNAVAQPRLMGSLLTTMVEFSAMAAGMPISYIELGGVSVTIVLHEAAKVFCALFHDREDGPTFGRLICTEMLYRFIDRFSSEI-GSPGHNLKDFHDYHREIADAIRNAVNPVLAKVQAQRGVILALLITEDAEVHPQTDVDKIGVLANLQPLLSSATDILAHHDDSCLHLALEGSSHSRILLWRIDRAVLVVSVSKQVNSVKYRAAVEEARDMLEKVVYLVS 241
BLAST of mRNA_L-elsbetiae_contig5622.13962.1 vs. uniprot
Match: A0A0P1A6Z4_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6Z4_PLAHL) HSP 1 Score: 197 bits (500), Expect = 1.970e-58 Identity = 107/244 (43.85%), Postives = 161/244 (65.98%), Query Frame = 1 Query: 10 MIRNVLVM-KSGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVAVTLVGNEATNTFCALFHDRGDGATFGRLIASEMLNAFLEEHAKDIIEASSLNLKDFRAFKYRIPGIARKSVQPVLGKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAQAGNGCVSMSLESSTNSRILVWRIDVWTLVIAVHKS-ANRNRYQKHIDEALGVLHKVLELTST 735 M+RNVL+M SG+VLFS+E+AN V QPRL+GSL+TAM+EFS A+G V+Y++++ VAVT++ N+ FCA+FHD DGA++ +A E+L AF+ +H ++ NL+DF F+YRI + R SV+PV+ KL +GIL+ LV + + T T ++D +G+LANLQAL++ S D+M+ +G+ SM+++S NS I V ++ +I VHK A ++ IDE + L V L T Sbjct: 1 MLRNVLIMASSGIVLFSKEYANAVAQPRLVGSLITAMLEFSNKASGAPVSYIQMSSVAVTMITNDKHKVFCAMFHDTTDGASYSAFVAQELLTAFIAQHGDELGNMGH-NLRDFHRFQYRILSVIRDSVKPVVRKLQKQRGILKAMLVVDGAVTCATGDVDPIGVLANLQALVNSSIDMMSFSGDDVSSMTIQSGRNSCIQVSVVEGTDALIVVHKKGAQTSKNTAAIDECVRALRHVCALART 243
BLAST of mRNA_L-elsbetiae_contig5622.13962.1 vs. uniprot
Match: A0A7S2B5T7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5T7_9STRA) HSP 1 Score: 193 bits (490), Expect = 6.860e-57 Identity = 108/245 (44.08%), Postives = 158/245 (64.49%), Query Frame = 1 Query: 10 MIRNVLVMK--SGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVAVTLVGNEATNTFCALFHDRGDGATFGRLIASEMLNAFLEEHAKDIIEASSLNLKDFRAFKYRIPGIARKSVQPVLGKLV--HVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAQAGNGCVSMSLESSTNSRILVWRIDVWTLVIAVHKSANRNRYQKHIDEALGVLHKVLELTS 732 M+RNVL++ SGL LFS+EF N + QPR++G LLTAM+E S G+ V Y+EL+ VAVT++ +E CALFHDR DG FG+LIAS++L AFLEE++ ++ NLKDF F +I G R S++PVL +L H + I + LVTE + + +D+L LLANLQAL+ LS++++AQ + C + LE S + R L+WRI+ ++ V+KS Y+ ++EA +L +V + S Sbjct: 1 MLRNVLLIATTSGLTLFSKEFLNAISQPRMIGGLLTAMMESSVRTTGLPVTYIELSNVAVTIMKDEVVKVCCALFHDRSDGPAFGKLIASQILCAFLEEYSGNLTSPGR-NLKDFHGFHLKIAGAVRNSIRPVLNRLHGHHSRAIQKAMLVTEDAIVQTGSAVDELALLANLQALLYLSSELLAQRDDLCSQIVLEGSGDVRTLLWRIEHAVFIVVVNKSVRPTHYRAALNEAAKMLGQVCFVMS 244
BLAST of mRNA_L-elsbetiae_contig5622.13962.1 vs. uniprot
Match: F0WRA1_9STRA (Uncharacterized protein AlNc14C210G8908 n=2 Tax=Albugo TaxID=65356 RepID=F0WRA1_9STRA) HSP 1 Score: 186 bits (473), Expect = 2.230e-54 Identity = 103/241 (42.74%), Postives = 155/241 (64.32%), Query Frame = 1 Query: 10 MIRNVLVM-KSGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVAVTLVGNEATNTFCALFHDRGDGATFGRLIASEMLNAFLEEHAKDIIEASSLNLKDFRAFKYRIPGIARKSVQPVLGKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAQAGNGCVSMSLESSTNSRI-LVWRIDVWTLVIAVHKSANRNRYQKHIDEALGVLHKVLEL 726 M+RNVL+M SG++LFS+E+ NT+ QPRL+GSL+TAM+EFS G+ V+Y++ VAVT+V NEA FCA+FHD DGA+F IA+E+L AF+ E A ++ N++ F F RI GI R S+Q +L +L +GIL+ V + S TAE+DQ+G+LANLQ L++ S D+MA N S++++SS ++ ++ +D TL++ K + ++ I E + +L KV L Sbjct: 1 MLRNVLIMASSGIMLFSKEYTNTISQPRLIGSLMTAMLEFSAKVTGLPVSYIKFAKVAVTVVSNEAAKVFCAMFHDPSDGASFSSFIANEILEAFIVEFAAELGNVGH-NVRQFDRFHLRIVGIIRHSIQRLLKQLQQQRGILKAIFVADGSIIHATAEVDQIGVLANLQVLVNASLDMMAAVNNTVNSVTIQSSRSTCTEVIHVVDDGTLIVVHRKGVSATKHTLAIQECVQMLRKVCGL 240
BLAST of mRNA_L-elsbetiae_contig5622.13962.1 vs. uniprot
Match: F0WRT2_9STRA (Uncharacterized protein AlNc14C219G9077 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WRT2_9STRA) HSP 1 Score: 186 bits (471), Expect = 6.150e-54 Identity = 107/247 (43.32%), Postives = 157/247 (63.56%), Query Frame = 1 Query: 10 MIRNVLVM-KSGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVAVTLVGNEATNTFCALFHDRGDGATFGRLIASEMLNAFLEEHAKDIIEASSLNLKDFRAFKYRIPGIARKSVQPVLGKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAQAGNGCVSMSLESSTNSRI-LVWRIDVWTLVIAVHKSANRNRYQKHIDEALGVLHKVLELTSTPSN 744 M+RNVL+M SG++LFS+E+ NT+ QPRL+GSL+TAM+EFS G+ V+Y++ VAVT+V NEA FCA+FHD DGA+F IA+E+L AF+ E A ++ N++ F F RI GI R S+Q +L +L +GIL+ V + S TAE+DQ+G+LANLQ L++ S D+MA N S++++SS ++ ++ +D TL++ K R YQ HI + G+ E TPS+ Sbjct: 1 MLRNVLIMASSGIMLFSKEYTNTISQPRLIGSLMTAMLEFSAKVTGLPVSYIKFAKVAVTVVSNEAAKVFCAMFHDPSDGASFSSFIANEILEAFIVEFAAELGNVGH-NVRQFDRFHLRIVGIIRHSIQRLLKQLQQQRGILKAIFVADGSIIHATAEVDQIGVLANLQVLVNASLDMMAAVNNTVNSVTIQSSRSTCTEVIHVVDDGTLIVVHRKRCIR--YQTHIGNS-GMCSNAAESVWTPSS 243
BLAST of mRNA_L-elsbetiae_contig5622.13962.1 vs. uniprot
Match: A0A6G0WTP7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTP7_9STRA) HSP 1 Score: 184 bits (468), Expect = 1.290e-53 Identity = 107/241 (44.40%), Postives = 155/241 (64.32%), Query Frame = 1 Query: 10 MIRNVLVMK-SGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVAVTLVGNEATNTFCALFHDRGDGATFGRLIASEMLNAFLEEHAKDIIEASSLNLKDFRAFKYRIPGIARKSVQPVLGKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAQAGNGCVSMSLESSTNSRILVWRIDVWTLVIAVHKSANRNRYQ-KHIDEALGVLHKVLEL 726 M+RNVLVM SGLVLFS+EF + + QPRL+GSLLTA++EFS G V+Y+E T VAVT+V NE+ FCA+F D DG FG +A E+L AF++E+A D+ NL+DF F Y+I + R+SV+P+L L +GI + LVT+ + T+ T E+DQLG+L N+Q+L +L+ D MA G+ S+++ + NS I V I+ TLV++ + I+EA+ +L +V L Sbjct: 1 MLRNVLVMATSGLVLFSKEFLHAIPQPRLIGSLLTAILEFSAKTTGAPVSYMEFTNVAVTIVVNESAKVFCAIFFDVADGPKFGAFLAKEILAAFVDEYAGDLGNIGH-NLRDFHGFHYKISEVIRESVKPILSTLQQQRGIQKAILVTDDAVTYATVEVDQLGVLVNMQSLRTLAADTMAFVGDNAHSITILGARNSSIQVRAIENATLVVSFKQGGPYTAVCIAAINEAIFMLQRVCLL 240
BLAST of mRNA_L-elsbetiae_contig5622.13962.1 vs. uniprot
Match: A0A1V9YWE0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWE0_9STRA) HSP 1 Score: 184 bits (468), Expect = 1.370e-53 Identity = 105/242 (43.39%), Postives = 157/242 (64.88%), Query Frame = 1 Query: 10 MIRNVLVMK-SGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYVELTGVAVTLVGNEATNTFCALFHDRGDGATFGRLIASEMLNAFLEEHAKDIIEASSLNLKDFRAFKYRIPGIARKSVQPVLGKLVHVKGILRCALVTETSETFQTAEIDQLGLLANLQALISLSTDIMAQAGNGCVSMSLESSTNSRILVWRIDVW--TLVIAVHKSANRNRYQKHIDEALGVLHKVLEL 726 M+RNVL+M SGLVLFS+EFA+ + QPRL+GSLLTAM+EFS G+ V+++E + VAVT+V +E+ FCALF+D DGA FG +A E+L AF++E+A D+ NL+DF F ++I + R SV+P+L L +G+ + LVTE + T T E+DQLG+L NLQ+L +L+ ++MA G+ S++++ + N I V + TLV+A K + I +A+ +L +V L Sbjct: 1 MLRNVLLMATSGLVLFSKEFAHAIAQPRLIGSLLTAMLEFSAKTTGVPVSFIEFSNVAVTIVTSESARVFCALFYDVADGAKFGAFLAREILTAFVDEYASDLGNIGH-NLRDFHGFHFKISEVIRDSVKPILAALQQHRGVQKAVLVTEDAVTHATVEVDQLGVLVNLQSLRNLAANMMAFVGDNAHSVTIQGARNCSIQVSSLAPTNATLVVAYKKGPHAPHCLAAIHDAMHMLTRVCLL 241 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5622.13962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5622.13962.1 >prot_L-elsbetiae_contig5622.13962.1 ID=prot_L-elsbetiae_contig5622.13962.1|Name=mRNA_L-elsbetiae_contig5622.13962.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp MIRNVLVMKSGLVLFSREFANTVQQPRLLGSLLTAMVEFSKVAAGMQVAYback to top mRNA from alignment at L-elsbetiae_contig5622:3261..10441+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5622.13962.1 ID=mRNA_L-elsbetiae_contig5622.13962.1|Name=mRNA_L-elsbetiae_contig5622.13962.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7181bp|location=Sequence derived from alignment at L-elsbetiae_contig5622:3261..10441+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5622:3261..10441+ >mRNA_L-elsbetiae_contig5622.13962.1 ID=mRNA_L-elsbetiae_contig5622.13962.1|Name=mRNA_L-elsbetiae_contig5622.13962.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1500bp|location=Sequence derived from alignment at L-elsbetiae_contig5622:3261..10441+ (Laminarionema elsbetiae ELsaHSoW15)back to top |