prot_L-elsbetiae_contig5622.13961.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5622.13961.1
Unique Nameprot_L-elsbetiae_contig5622.13961.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length788
Homology
BLAST of mRNA_L-elsbetiae_contig5622.13961.1 vs. uniprot
Match: D7FUY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUY7_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 5.300e-9
Identity = 56/96 (58.33%), Postives = 67/96 (69.79%), Query Frame = 0
Query:  680 SSGAAGVSLRPEDG-----------QEAATGEDGEQDDESSCALARKRALLRVRLARQQHELATAVVDAHERGLRAERRXXXXXXXXXXXXSARRD 764
            SSG A ++ +PE             +++   +D   ++ESSCALARKRALLRVRLARQ+  LATA VDA+ERGLRAER XXXXXXXXXX   ARRD
Sbjct:    6 SSGKAAIAKKPERDWRSFPLVRVAREDSGIDDDDANEEESSCALARKRALLRVRLARQRQSLATAAVDANERGLRAERXXXXXXXXXXXLMKARRD 101          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5622.13961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUY7_ECTSI5.300e-958.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5622contigL-elsbetiae_contig5622:359..2969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5622.13961.1mRNA_L-elsbetiae_contig5622.13961.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5622 359..3110 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5622.13961.1 ID=prot_L-elsbetiae_contig5622.13961.1|Name=mRNA_L-elsbetiae_contig5622.13961.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=788bp
MGCSPHQQEKGELLGCDGTTVLLPPVEKEFSNADSSSGKKFLRNLRTLLL
RIRMAGQLRQGFVLEKHFVELKDLCRRVCVELGATATVSENLWAVVQQRR
GDAENFHQHSNGPACSLAQDAETVSRAGEILQRAAAARAQDSCAFDVPSS
ALSSPSFYGGGTNKDEQISARCSPRHGLQLRKDSLNPQQDAVAPPTGAES
ASFDNPADSVPPLSFAETLGVGNAVDACLDFIANETEAVVAAAKKRFSRS
ETMDVTSPALPPADWALAVQRLAAWSRKGGEGTIASRLQPTLSLSPTGGN
EIQEPSPPSSASPPQGSGCCSRHFCGLCRAASDKRGATAVVERATQCPGD
EMEDDGTILNHRTAVRRRTQAPRRNLRCALRRSPPLRSEPQQTPSTTKST
PSSLPPPPPPPPWPRAACVEPTVTYFDDGAADGHVVAWRERSLGDHPVNV
VPWATAKACCRQQAAHREAAAPGGCSMRGHMGGDIRDSSSGSNDGVDEQV
SFEEDGRDDDRSELSADDIPRDLWNHESKVSGGGEGDDMRERRCCGYMSG
DADNGCCRKNEDPMGAFSKSTGKSTSRTMLPGRASTRLAAEAVQPATSKA
SVRVEKQSPSRHPSERWSFARFESDLSSERHDPNEEPTSQRRWPSHSAGY
DDDRDGRSDDGGGDAEAVRPGPRECNIEFSSGAAGVSLRPEDGQEAATGE
DGEQDDESSCALARKRALLRVRLARQQHELATAVVDAHERGLRAERRRKR
EEKLAALLISARRDSSGGDIGYGGCSGNQSARGGQLGR
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