prot_L-elsbetiae_contig562.13957.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig562.13957.1
Unique Nameprot_L-elsbetiae_contig562.13957.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length320
Homology
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BLAST of mRNA_L-elsbetiae_contig562.13957.1 vs. uniprot
Match: D7G6V9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V9_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 4.620e-55
Identity = 106/133 (79.70%), Postives = 121/133 (90.98%), Query Frame = 0 
Query:  111 MGVREEMWAQAARDRDALEAELGLRHEEERSRFLEEANERASEIVEEVKKEMAAEAERDRELYAQRAALAEEGQELAREDRKQLQAEKDALARQLQETVEMEDANRRKIIIKFKARENALRQNFEARLREVAG 243
            M VREEMWAQAARDRDALEAEL LRHE ERSRFLEEA ER SEIVEEVK++MA E ERDRELYAQRAALAEEGQE+ARE+R QLQAEK++L RQL+ET+EM+DA+RR+II+KFKARE+A+R+NFEA LRE  G
Sbjct:    1 MAVREEMWAQAARDRDALEAELSLRHEAERSRFLEEAGERDSEIVEEVKRKMAEEMERDRELYAQRAALAEEGQEIAREERNQLQAEKESLLRQLKETMEMDDASRRRIILKFKAREHAMRKNFEAELREARG 133
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig562.13957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6V9_ECTSI4.620e-5579.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..105
NoneNo IPR availableCOILSCoilCoilcoord: 42..62
NoneNo IPR availableCOILSCoilCoilcoord: 134..168
NoneNo IPR availableCOILSCoilCoilcoord: 177..211
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..319
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig562contigL-elsbetiae_contig562:21148..25550 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig562.13957.1mRNA_L-elsbetiae_contig562.13957.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig562 21142..25775 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig562.13957.1 ID=prot_L-elsbetiae_contig562.13957.1|Name=mRNA_L-elsbetiae_contig562.13957.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=320bp
MVRANGIVLWVITASSISTTTLQARRTDRSILGKKISPEDVVRVQDARLE
RLQKRIASMSMEGAILAERTRQHREMRLKGNAELKDKVEELKLKLRTERE
RMQKDFEDQLMGVREEMWAQAARDRDALEAELGLRHEEERSRFLEEANER
ASEIVEEVKKEMAAEAERDRELYAQRAALAEEGQELAREDRKQLQAEKDA
LARQLQETVEMEDANRRKIIIKFKARENALRQNFEARLREVAGAGGETPT
STSMPEEREKAAANANRPRVTKTKLPSSASTNSSSAREAHRAAVRSSVPS
GVGAPSSGFQASAGPTAQR*
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