mRNA_L-elsbetiae_contig5610.13947.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5610.13947.1 vs. uniprot
Match: A0A6H5KZY7_9PHAE (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY7_9PHAE) HSP 1 Score: 160 bits (405), Expect = 3.230e-48 Identity = 78/105 (74.29%), Postives = 89/105 (84.76%), Query Frame = 1 Query: 1 ACMQMEKIMLDYDENSVITTYDQTSDNKEVFKGVEGARNLFGGLFKALSDPSDLAAPVIDVDEASKVIFLVWRCPASGFLDATDTFLVDGETNKIYRQNVAYRTG 315 A ME+I+LDYDE+SV+TTYDQT+D K VFKGVEGAR LF GLF+ALSD SDLAAPVIDV E S ++FLVWRCPASGFLDATDTF + +T KI RQNVAY+TG Sbjct: 71 AAHDMERILLDYDEDSVVTTYDQTADKKTVFKGVEGARTLFEGLFEALSDQSDLAAPVIDVSEESNMVFLVWRCPASGFLDATDTFTHNDKTKKISRQNVAYKTG 175
BLAST of mRNA_L-elsbetiae_contig5610.13947.1 vs. uniprot
Match: D7G623_ECTSI (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G623_ECTSI) HSP 1 Score: 156 bits (395), Expect = 2.200e-47 Identity = 76/105 (72.38%), Postives = 88/105 (83.81%), Query Frame = 1 Query: 1 ACMQMEKIMLDYDENSVITTYDQTSDNKEVFKGVEGARNLFGGLFKALSDPSDLAAPVIDVDEASKVIFLVWRCPASGFLDATDTFLVDGETNKIYRQNVAYRTG 315 A M++I+LDYDE+SV+TTYDQT+D VFKGVEGAR LF GLF+ALSD SDLAAPVIDV E S ++FLVWRCPASGFLDATDTF + +T KI RQNVAY+TG Sbjct: 20 AAHDMDRILLDYDEDSVVTTYDQTADRISVFKGVEGARTLFEGLFEALSDQSDLAAPVIDVSEESNMVFLVWRCPASGFLDATDTFTHNDKTKKISRQNVAYKTG 124
BLAST of mRNA_L-elsbetiae_contig5610.13947.1 vs. uniprot
Match: A0A812KSN4_9DINO (CasB protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812KSN4_9DINO) HSP 1 Score: 97.8 bits (242), Expect = 1.370e-23 Identity = 50/101 (49.50%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 13 MEKIMLDYDENSVITTYDQTSDNKEVFKGVEGARNLFGGLFKALSDPSDLAAPVIDVDEASKVIFLVWRCPASGFLDATDTFLVDGETNKIYRQNVAYRTG 315 ++KIMLDYD+ S+ Y+ +K F G RN+F LF LS+ L APV+DVDEA K +FLVW CP G+ ATDTF V G NKI RQN+ G Sbjct: 54 LDKIMLDYDDTSIAKVYNNKDGSKSEFVGKVQIRNMFTDLFADLSNLDTLKAPVVDVDEAGKTVFLVWECPGCGYHTATDTF-VFGPDNKIKRQNIVVTKG 153
BLAST of mRNA_L-elsbetiae_contig5610.13947.1 vs. uniprot
Match: A0A8J2SYK6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYK6_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 2.880e-23 Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = 1 Query: 13 MEKIMLDYDENSVITTYDQTSDNKEVFKGVEGARNLFGGLFKALSDPSDLAAPVIDVDEASK----VIFLVWRCPASGFLDATDTFLVDGETNKIYRQNV 300 ++K++ DY E SVI Y+Q +D FKG++G + F GLFK LSD S LAAP I V+EA++ ++FLVWRCP+SG+ ATDTFL D KI +QNV Sbjct: 155 VDKVLKDYTEKSVIKVYNQVTDELVEFKGLKGVKECFTGLFKDLSDLSGLAAPAIRVEEATEDKAGMVFLVWRCPSSGYNHATDTFLFDA-AGKIAKQNV 253
BLAST of mRNA_L-elsbetiae_contig5610.13947.1 vs. uniprot
Match: A0A812STE6_9DINO (CasB protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812STE6_9DINO) HSP 1 Score: 98.2 bits (243), Expect = 3.060e-23 Identity = 51/101 (50.50%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 13 MEKIMLDYDENSVITTYDQTSDNKEVFKGVEGARNLFGGLFKALSDPSDLAAPVIDVDEASKVIFLVWRCPASGFLDATDTFLVDGETNKIYRQNVAYRTG 315 ++KIMLDYD+ SV Y+ +K F G RN+F LF LS+ L APV+DVDEA K +FLVW CP SG+ TDTF V G NKI RQN+ G Sbjct: 100 LDKIMLDYDDTSVAKVYNNKDGSKSEFVGRVQIRNMFTNLFSDLSNLDTLKAPVVDVDEAGKTVFLVWECPGSGYHFGTDTF-VFGPDNKIKRQNIVVTKG 199
BLAST of mRNA_L-elsbetiae_contig5610.13947.1 vs. uniprot
Match: A0A812Z7R4_9DINO (CasB protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Z7R4_9DINO) HSP 1 Score: 97.8 bits (242), Expect = 3.860e-23 Identity = 50/101 (49.50%), Postives = 62/101 (61.39%), Query Frame = 1 Query: 13 MEKIMLDYDENSVITTYDQTSDNKEVFKGVEGARNLFGGLFKALSDPSDLAAPVIDVDEASKVIFLVWRCPASGFLDATDTFLVDGETNKIYRQNVAYRTG 315 ++KIMLDYD+ S+ Y+ +K F G RN+F LF LS+ L APV+DVDEA K +FLVW CP G+ ATDTF V G NKI RQN+ G Sbjct: 97 LDKIMLDYDDTSIAKVYNNKDGSKSEFVGKVQIRNMFTDLFADLSNLETLKAPVVDVDEAGKTVFLVWECPGCGYHTATDTF-VFGPDNKIKRQNIVVTKG 196
BLAST of mRNA_L-elsbetiae_contig5610.13947.1 vs. uniprot
Match: A0A813B714_SYMMI (CasB protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813B714_SYMMI) HSP 1 Score: 96.7 bits (239), Expect = 2.230e-21 Identity = 49/96 (51.04%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 13 MEKIMLDYDENSVITTYDQTSDNKEVFKGVEGARNLFGGLFKALSDPSDLAAPVIDVDEASKVIFLVWRCPASGFLDATDTFLVDGETNKIYRQNV 300 ++KIMLDYD+ S+ Y+ +K F G RN+F LF LS+ L APV+DVDEA K +FLVW CP G+ ATDTF V G NKI RQN+ Sbjct: 107 LDKIMLDYDDTSIAKVYNNKDGSKSEFVGKVQIRNMFTDLFADLSNLDTLKAPVVDVDEAGKTVFLVWECPGCGYHTATDTF-VFGPDNKIKRQNI 201
BLAST of mRNA_L-elsbetiae_contig5610.13947.1 vs. uniprot
Match: A0A1Q9EQB8_SYMMI (Metacaspase-1B n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9EQB8_SYMMI) HSP 1 Score: 96.7 bits (239), Expect = 3.980e-21 Identity = 49/96 (51.04%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 13 MEKIMLDYDENSVITTYDQTSDNKEVFKGVEGARNLFGGLFKALSDPSDLAAPVIDVDEASKVIFLVWRCPASGFLDATDTFLVDGETNKIYRQNV 300 ++KIMLDYD+ S+ Y+ +K F G RN+F LF LS+ L APV+DVDEA K +FLVW CP G+ ATDTF V G NKI RQN+ Sbjct: 97 LDKIMLDYDDTSIAKVYNNKDGSKSEFVGKVQIRNMFTDLFADLSNLDTLKAPVVDVDEAGKTVFLVWECPGCGYHTATDTF-VFGPDNKIKRQNI 191
BLAST of mRNA_L-elsbetiae_contig5610.13947.1 vs. uniprot
Match: A0A6T7BC46_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7BC46_9STRA) HSP 1 Score: 48.9 bits (115), Expect = 4.190e-5 Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 1 Query: 13 MEKIMLDYDENSVITTYDQTSDNKEVFKGVEGARNLFGGLFKALSD 150 ++KIMLDYDE SV+ + + + FKGVE R F GLFK L+D Sbjct: 56 LDKIMLDYDEKSVLRCFCHSDGADDTFKGVEEIRGFFDGLFKMLTD 101 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5610.13947.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5610.13947.1 >prot_L-elsbetiae_contig5610.13947.1 ID=prot_L-elsbetiae_contig5610.13947.1|Name=mRNA_L-elsbetiae_contig5610.13947.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp MQMEKIMLDYDENSVITTYDQTSDNKEVFKGVEGARNLFGGLFKALSDPSback to top mRNA from alignment at L-elsbetiae_contig5610:6328..7330- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5610.13947.1 ID=mRNA_L-elsbetiae_contig5610.13947.1|Name=mRNA_L-elsbetiae_contig5610.13947.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1003bp|location=Sequence derived from alignment at L-elsbetiae_contig5610:6328..7330- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5610:6328..7330- >mRNA_L-elsbetiae_contig5610.13947.1 ID=mRNA_L-elsbetiae_contig5610.13947.1|Name=mRNA_L-elsbetiae_contig5610.13947.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=624bp|location=Sequence derived from alignment at L-elsbetiae_contig5610:6328..7330- (Laminarionema elsbetiae ELsaHSoW15)back to top |