mRNA_L-elsbetiae_contig5608.13942.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5608.13942.1
Unique NamemRNA_L-elsbetiae_contig5608.13942.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5608.13942.1 vs. uniprot
Match: D7G099_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G099_ECTSI)

HSP 1 Score: 449 bits (1154), Expect = 5.400e-136
Identity = 258/424 (60.85%), Postives = 296/424 (69.81%), Query Frame = 1 
Query:  952 KISDLKMGGFVRGVEQRYTPHPFHNLTHAVSVTHASFVIIKTTRVDSLLRPLDKLALLVAALCHDIDHPGNNNDYEVKSLSPLALQHGDSSVLERHHIFVTYQVLLQEGGANNIFSELTRAEFQDARQMIVKAILGTDMSNHMQHCADVFHFAQKAKRLRTGGGRG-----AAADWSTTRQGKD--------------HGKG------------------------------SPRQQRSKSEVTAP--PGTPRGGE----GGTMGPLPLLPXXXXXXXPSPSTPPAHVFSLDRPEDRYFLTQTIVHCADLSGQVLKTPLALEWGRRILEEFRRQAALEASAGLPLTTIMSGDMETTMKGQHFFVAKIVKPLWEPFVVLFPELSPLLRNLHKNCDYYFREGERLEQERLAVATVPAPSSRANSGK 2058
            +ISD KM  FVRGVE+RY P+ FHNLTHAVSVTHASF I+KTT+V+SLLRPLDKLALLVAA CHDIDHPGNNN YEV SLSPLALQHGDSSVLERHH+FVTYQVLL+EGGANNIFS LTRA+F+D RQ IV+AILGTDMS HMQHCADVF   QKAK+L    GRG     A+A  + +RQGK               HG+G                              SP ++RSKS   A   PG   G      G +M P PL PXXXXXXX        H+FS+D+ EDR FLT+TI+HCADLSGQVL   LALEWGRRIL+EFR QA LE +AGLPLTT+ SGD ETTMKGQHFF  KIVKPLW+PF VLFP+L+PLL NL+ NCDYY +E  RLEQ+RL+ ++     S   +G+
Sbjct:  720 QISDQKMQNFVRGVERRYRPNSFHNLTHAVSVTHASFTIVKTTQVNSLLRPLDKLALLVAAFCHDIDHPGNNNAYEVNSLSPLALQHGDSSVLERHHVFVTYQVLLEEGGANNIFSGLTRAQFRDVRQTIVQAILGTDMSGHMQHCADVFQCVQKAKKLAAFRGRGCPGGRASASGAASRQGKGRAGRSLSPVAMMETHGEGGAAEARGGVGLRSTRASCPPPGGGDGDGVDSPAKKRSKSAAIANGLPGCSSGARKNTRGRSMSPPPLTPXXXXXXXXX-----EHLFSVDKAEDRSFLTKTILHCADLSGQVLDNHLALEWGRRILDEFRLQARLEGTAGLPLTTVASGDRETTMKGQHFFATKIVKPLWQPFAVLFPKLAPLLENLNNNCDYYHQEWLRLEQQRLSASSASNADSPQRAGE 1138
[Close]
BLAST of mRNA_L-elsbetiae_contig5608.13942.1 vs. uniprot
Match: D7G095_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G095_ECTSI)

HSP 1 Score: 437 bits (1125), Expect = 3.250e-135
Identity = 232/372 (62.37%), Postives = 270/372 (72.58%), Query Frame = 1 
Query:  955 ISDLKMGGFVRGVEQRYTPHPFHNLTHAVSVTHASFVIIKTTRVDSLLRPLDKLALLVAALCHDIDHPGNNNDYEVKSLSPLALQHGDSSVLERHHIFVTYQVLLQEGGANNIFSELTRAEFQDARQMIVKAILGTDMSNHMQHCADVFHFAQKAKRLRTGGGR---------------GAAADWSTTRQGKDHG-KGSPRQQRSKSEVTAPPGTPRGGEGGTMGPLPLLPXXXXXXXPSPSTPPAHVFSLDRPEDRYFLTQTIVHCADLSGQVLKTPLALEWGRRILEEFRRQAALEASAGLPLTTIMSGDMETTMKGQHFFVAKIVKPLWEPFVVLFPELSPLLRNLHKNCDYYFREGERLEQERLAVAT 2022
            I D KM  F+R VE+RY P+ FHNLTHAVSVTHASF I+KT+R DSLLRPLDKL LLVAA CHDIDHPGNNN YEV S+SPLALQ+GDSSVLERHH+FVTYQVLL+EGGANNIFS LTR +F+D RQ IV+AILGTDMS HMQHCADVF FA KAKRL  GGG                G          G D   K   R + + +  T+  G   G EG     + LL          PS PP H+ S+D+ EDR FLT+TI+HCADLSGQVL   LALEWGRRIL+EFR QA LEA+ GLP TT+ SGD+ETT+KGQHFF  KIVKPLWEPFV LFP+L PLL++L++NC+YY +EG RLE++RL+ A+
Sbjct:  435 IPDKKMWSFLRAVERRYPPNAFHNLTHAVSVTHASFTIVKTSRADSLLRPLDKLGLLVAAFCHDIDHPGNNNAYEVNSVSPLALQYGDSSVLERHHVFVTYQVLLEEGGANNIFSGLTRIQFRDVRQTIVQAILGTDMSGHMQHCADVFQFALKAKRLAAGGGERQDGLLRVPQKNFQAGGXXXXXXXXVGADRAAKSHTRPKATAARETS--GFAEGMEGARGEGVVLLALARAPPSVLPSPPPEHILSVDKAEDRSFLTKTILHCADLSGQVLDNHLALEWGRRILDEFRLQARLEANTGLPRTTVASGDLETTIKGQHFFAEKIVKPLWEPFVALFPKLKPLLKSLNRNCEYYRQEGLRLERQRLSAAS 804
[Close]
BLAST of mRNA_L-elsbetiae_contig5608.13942.1 vs. uniprot
Match: A0A6H5KY22_9PHAE (Phosphodiesterase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY22_9PHAE)

HSP 1 Score: 440 bits (1131), Expect = 9.830e-134
Identity = 236/383 (61.62%), Postives = 275/383 (71.80%), Query Frame = 1 
Query:  952 KISDLKMGGFVRGVEQRYTPHPFHNLTHAVSVTHASFVIIKTTRVDSLLRPLDKLALLVAALCHDIDHPGNNNDYEVKSLSPLALQHGDSSVLERHHIFVTYQVLLQEGGANNIFSELTRAEFQDARQMIVKAILGTDMSNHMQHCADVFHFAQKAKRLRTGGGRGAAADWSTTR---QGKDHGKGSPRQQRSKSEVTAPP-----GTPRGGEGGTMGPLPLLPXXXXXXXPSPSTPPAHVFSLDRPEDRYFLTQTIVHCADLSGQVLKTPLALEWGRRILEEFRRQAALEASAGLPLTTIMSGDMETTMKGQHFFVAKIVKPLWEPFVVLFPELSPLLRNLHKNCDYYFREGERLEQERLAVATVPAPSSRANSGKNMTGGG 2076
            +I D KM  F+R VE+R+ P+ FHNLTHAVSVTHASF I+KT+R DSLLRPLDKL LLVAA CHDIDHPGNNN YEV S+SPLALQ+GDSSVLERHH+FVTYQVLL+EGGANNIFS LTR +F+D RQ IV+AILGTDMS HMQHCADVF FA KA+RL   GG G        +   Q +  G G+ R  +S +   A       G   G EG     +  L          PS PP H+FS+D+ EDR FLT+TI+HCADLSGQ+L   LALEWGRRILEEFR QA LEA+ GLP TT+ SGD+ETT+KGQ FF  KIVKPLWEPFV LFPEL PLL+ L++NC+YY +EG RLEQ+RL+ A+     SR        GGG
Sbjct:  691 QIPDKKMWSFLRAVERRHPPNAFHNLTHAVSVTHASFTIVKTSRADSLLRPLDKLGLLVAAFCHDIDHPGNNNAYEVNSVSPLALQYGDSSVLERHHVFVTYQVLLEEGGANNIFSGLTRIQFRDVRQTIVQAILGTDMSGHMQHCADVFQFALKARRLAADGGEGQDGLLRVPQKKSQARGGGIGADRAAKSHTRPKAAAACDTSGLSEGMEGARGEGVVSLALAPVPLSVLPSPPPEHIFSVDKAEDRLFLTKTILHCADLSGQLLDNHLALEWGRRILEEFRLQARLEANTGLPRTTVASGDLETTIKGQRFFAEKIVKPLWEPFVALFPELKPLLKGLNRNCEYYRQEGLRLEQQRLSAAS----GSRRPQQNGQEGGG 1069
[Close]
BLAST of mRNA_L-elsbetiae_contig5608.13942.1 vs. uniprot
Match: A0A8K1CS64_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CS64_PYTOL)

HSP 1 Score: 214 bits (545), Expect = 1.750e-53
Identity = 138/386 (35.75%), Postives = 196/386 (50.78%), Query Frame = 1 
Query:  970 MGGFVRGVEQRYTPHPFHNLTHAVSVTHASFVIIKTTRVDSLLRPLDKLALLVAALCHDIDHPGNNNDYEVKSLSPLALQHGDSSVLERHHIFVTYQVLLQEGGANNIFSELTRAEFQDARQMIVKAILGTDMSNHMQHCADVFHFAQKAKRLRTGGGRGAAADWSTTRQGKDHGKGSPRQQRSKSEVTAPPGTPRGGEGGTMGPLPLLPXXXXXXXPSPSTP--------------PAHVFSLDRPE---------------DRYFLTQTIVHCADLSGQVLKTPLALEWGRRILEEFRRQAALEASAGLPLTTIMSGDMETTMKGQHFFVAKIVKPLWEPFVVLFPELSPLLRNLHKNCDYYFREGERLEQERLAVATVPAPSS 2040
            M  F+  V++ Y P+PFHN  HAVSV H+++ I+KTT+   +L+PLD  A LVAA CHD+DHPG+ N +E+ S S LAL + D SVLERHH   T++++ ++   N I   L+ A+F   R+MIV AILGTDMS H + C  +          +       +A  +T R+       S     S S++ A      G EG +   L ++        PS ST               P+   +    E               +R FL + IVH +DL GQV   P+AL+W   + +EF  QA LE +  LP++     D    ++GQHFF  KIV PLW     +FPEL   + NLH N  +Y +E ERL+Q    + T  + +S
Sbjct:  668 MRNFILAVKESYHPNPFHNYLHAVSVLHSTYAILKTTKASQMLQPLDIAACLVAAYCHDVDHPGHTNSFEIVSKSQLALLYSDESVLERHHACTTFRIMSRDKNVN-ILQNLSAADFSYIRKMIVSAILGTDMSQHFKTCEALEKMLHPVPHSQM-----TSAALATRRESL-----SSSDAASVSKMAAR----NGDEGSSAEILSVVRDAVFHSDPSISTSGLAPTCTASSTKSLPSRALACSSIESSHSSYDSVFNGTLDERVFLVKCIVHTSDLCGQVFPKPVALKWSNLVSKEFAYQALLEQAENLPVSHQHMDDPLQMVEGQHFFAHKIVSPLWTLMHQMFPELDVCIENLHANVAHYEQEMERLKQHHRRLITASSEAS 1038
[Close]
BLAST of mRNA_L-elsbetiae_contig5608.13942.1 vs. uniprot
Match: A0A5D6Y2B9_9STRA (Phosphodiesterase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2B9_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.410e-52
Identity = 136/388 (35.05%), Postives = 211/388 (54.38%), Query Frame = 1 
Query:  919 VFLPPTQPFLSKISDLKMGGFVRGVEQRYTPHPFHNLTHAVSVTHASFVIIKTTRVDSLLRPLDKLALLVAALCHDIDHPGNNNDYEVKSLSPLALQHGDSSVLERHHIFVTYQVLLQEGGANNIFSELTRAEFQDARQMIVKAILGTDMSNHMQHCAD--------VFHFAQKA-----KRLRTGGGRGAAADWSTTRQGKDHGKGSPRQQRSKSEVTAPPGTPRGGEGGTMGPLPL-LPXXXXXXXPSPSTPPAHVFSLDRPEDRYFLTQTIVHCADLSGQVLKTPLALEWGRRILEEFRRQAALEASAGLPLTTIMSGDMETTMKGQHFFVAKIVKPLWEPFVVLFPELSPLLRNLHKNCDYYFREGERL----EQERLAVATVP 2028
            +F+    P +  IS  +M  F+  +++ Y P+PFHN  HA SV H +++++ TT    +LRPLD    L+AALCHD+DHPG+ N YE++S S LA+ + D SVLERHH + T++++ +E  AN I   L+ ++++  R++I+ AILGTDM+NH + C          V H +  A       LR   G G+ ++ S++       +   R    +SE +A   TPR    G         P        +       +++    ++R F+ +TIVH +DLSGQV   P+AL+W   I +EF  QA LE +   P++     D    ++GQ FF  KIV PLWE   V+FPE++  ++NL +N  +Y +E +RL    E+ER     +P
Sbjct:  594 MFMKYNLPRVLNISQQRMQNFILVIKENYHPNPFHNFLHAFSVVHTAYLLLSTTEAARMLRPLDIAGCLIAALCHDVDHPGHTNAYEIQSGSQLAMLYSDESVLERHHAYTTFKLMSKEKSAN-ILENLSASDYRHVRKVIITAILGTDMANHFKFCETLEKTLNPPVRHISSSALVSAKNGLRHVEGFGSGSEKSSS---SSEIRTVLRDAVFQSEGSAA-NTPRNSSSGAAKAKAFCFPKSLSGLSQTREVGNGWLYN-GTVDERLFVVKTIVHASDLSGQVFSKPVALKWSNMISKEFAYQALLEQAENHPISYHDLNDPLQMVEGQLFFAQKIVAPLWELVHVMFPEVACCVKNLSENVAHYEQELQRLRMSHEEERKMSEPMP 975
[Close]
BLAST of mRNA_L-elsbetiae_contig5608.13942.1 vs. uniprot
Match: A0A3R6W911_9STRA (Phosphodiesterase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6W911_9STRA)

HSP 1 Score: 202 bits (513), Expect = 5.020e-51
Identity = 141/376 (37.50%), Postives = 196/376 (52.13%), Query Frame = 1 
Query:  979 FVRGVEQRYTPHPFHNLTHAVSVTHASFVIIKTTRVDSLLRPLDKLALLVAALCHDIDHPGNNNDYEVKSLSPLALQHGDSSVLERHHIFVTYQVLLQEGGANNIFSELTRAEFQDARQMIVKAILGTDMSNHMQHCADVFHFAQKAKRLRTGGGRGAAADWSTTRQGKDHGKGSPRQQRS-KSEVTAPPGTPRGGEGGTMGPLPLLPXXXXXXXPSPSTPPAHVFSLDRPEDRYFLTQTIVHCADLSGQVLKTPLALEWGRRILEEFRRQAALEASAGLPLTTIMSGDMETTMKGQHFFVAKIVKPLWEPFVVLFPELSPLLRNLHKNCDYYFREGERLE------QERLA-----VATVPAPSSRANSGKNMTG 2070
            F++ V   Y P+PFHN  H  SV H S+ I+  T    +L PLD+LA LVA+LCHDIDHPG++N +E+ S S LAL H D +VLERHH   T++ LLQ+   N IF+    ++F+  R+ IV+AILGTDM+ H      +     + + L T          +TT       K  P    +  S V++      G   G++ P            PS   PP  VF  +  +DR FL + IVH ADLS QV    +AL+W   I +EF  QA +E++ GLP+T     D    ++ QHFF A++V PLW   V  FP+L   + NLH N  +Y  E  RL+      Q+  A     V  +PAP+   N G+ + G
Sbjct:  257 FLQVVHDHYHPNPFHNFQHGFSVLHVSYRILTDTPARHVLHPLDRLACLVASLCHDIDHPGHSNVFEIHSNSSLALTHNDDAVLERHHAATTFR-LLQDPRVN-IFASFPTSDFRYVRKAIVRAILGTDMAVHND---TIDALVSRFQPLPT----------ATTPV-----KSPPLHHPTLASSVSSSXXXXSGDSTGSLPPAIWESPDVVPFPPSSPPPPWRVFE-NSEDDRLFLVKAIVHAADLSAQVFPKHIALKWSNMIAKEFAYQALMESAEGLPVTHQHVDDPLLMVESQHFFAARLVAPLWVALVQFFPQLHHCMTNLHANIAHYEVEIRRLQACGTACQKENADSNDKVPVLPAPT---NEGQAVPG 608
[Close]
BLAST of mRNA_L-elsbetiae_contig5608.13942.1 vs. uniprot
Match: A0A024UQT8_9STRA (Phosphodiesterase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQT8_9STRA)

HSP 1 Score: 205 bits (521), Expect = 6.450e-51
Identity = 134/356 (37.64%), Postives = 186/356 (52.25%), Query Frame = 1 
Query:  979 FVRGVEQRYTPHPFHNLTHAVSVTHASFVIIKTTRVDSLLRPLDKLALLVAALCHDIDHPGNNNDYEVKSLSPLALQHGDSSVLERHHIFVTYQVLLQEGGANNIFSELTRAEFQDARQMIVKAILGTDMSNHMQHCADVFHFAQKAKRLRTGGGRGAAADWSTTRQGKDHGKGSPRQQRSKSEVTAPPGTPRGGEGGTMGPLPLL--PXXXXXXXPSPSTPPAHVFSLDRPEDRYFLTQTIVHCADLSGQVLKTPLALEWGRRILEEFRRQAALEASAGLPLTTIMSGDMETTMKGQHFFVAKIVKPLWEPFVVLFPELSPLLRNLHKNCDYYFREGERLEQERLAVATVPAPSS 2040
            F++ V   Y P+PFHN  H  SV H S+ I+  T    +L PLD+LA LVA+LCHDIDHPG++N +E+ S SPLAL H D +VLERHH   T++ LLQ+   N +F+  + ++F+  R+ IV+AILGTDM+ H      +     + + L T          S  +   DH   +     S S  T+         G +  P+     P       PSP  PP  VF  +  +DR FL + +VH ADLS QV    +AL+W   I +EF  QA +E++ GLP+T     D    ++ QHFF A++V PLW   V  FPEL   + NL  N  +Y  E  RL+    A       S+
Sbjct:  519 FLQVVHDHYHPNPFHNFQHGFSVLHVSYRILSDTHAGRVLHPLDRLACLVASLCHDIDHPGHSNLFEIHSNSPLALTHNDDAVLERHHAATTFR-LLQDPRVN-VFAAFSTSDFRYVRKAIVRAILGTDMAIHND---TIDALVSRFQPLPTA--------MSPVKGITDHIHPALSSSHSSSASTS--------SGDSCSPIETNGEPLDELSIPPSPP-PPWRVFE-NSEDDRLFLVKAVVHAADLSAQVFPKHIALKWSNMIAKEFAYQALMESAEGLPVTHEHVDDPLLMVESQHFFAARLVAPLWVALVQFFPELDHCMTNLRANIAHYEVEIRRLQHSPTATGDASDQSA 851
[Close]
BLAST of mRNA_L-elsbetiae_contig5608.13942.1 vs. uniprot
Match: A0A485LDF6_9STRA (Phosphodiesterase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDF6_9STRA)

HSP 1 Score: 202 bits (513), Expect = 4.750e-50
Identity = 128/344 (37.21%), Postives = 170/344 (49.42%), Query Frame = 1 
Query:  979 FVRGVEQRYTPHPFHNLTHAVSVTHASFVIIKTTRVDSLLRPLDKLALLVAALCHDIDHPGNNNDYEVKSLSPLALQHGDSSVLERHHIFVTYQVLLQEGGANNIFSELTRAEFQDARQMIVKAILGTDMSNHMQHCADVF-HFAQKAKRLRTGG-GRGAAADWSTTRQGKDHGKGSPRQQRSKSEVTAPPGTPRGGEGGTMGPLPLLPXXXXXXXPSPSTPPAHVFSLDRPEDRYFLTQTIVHCADLSGQVLKTPLALEWGRRILEEFRRQAALEASAGLPLTTIMSGDMETTMKGQHFFVAKIVKPLWEPFVVLFPELSPLLRNLHKNCDYYFREGERLEQE 2004
            F+R V   Y P+PFHN  H  SV H ++  +K TR   +L PLD+LA LVA+LCHDIDHPG++N +E+ S S LALQH D +VLERHH   T++ LL+E   N I + L+  EF+  RQ I+KAI+GTDM+ H      +   F     RL       G AA+                                                           P  +F     EDR FL + +VH ADLSGQV   P+AL+W   I +EF  QA +E++ GLP+T +   D    ++ QHFF  ++V PLW   V  FPEL   + NL  N  +Y  E  RL+ E
Sbjct:  523 FLRVVHDHYHPNPFHNFQHGFSVLHVTYRFLKDTRARLVLLPLDRLACLVASLCHDIDHPGHSNVFEINSRSALALQHNDDAVLERHHAATTFR-LLKESRVN-ILATLSPDEFRYTRQAIIKAIIGTDMAVHFDTIEQMDKRFPSTRPRLDAAATDNGCAAE-----------------------------------------------------------PYLIFGKSA-EDRLFLVKALVHAADLSGQVFPKPIALKWSNMISKEFAYQALMESAEGLPVTHVHVDDPLLMVESQHFFAERLVAPLWISLVRYFPELDHCMTNLRGNIAHYEHEMARLKAE 804
[Close]
BLAST of mRNA_L-elsbetiae_contig5608.13942.1 vs. uniprot
Match: A0A1W0A9L1_9STRA (Phosphodiesterase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9L1_9STRA)

HSP 1 Score: 201 bits (512), Expect = 4.790e-50
Identity = 123/341 (36.07%), Postives = 172/341 (50.44%), Query Frame = 1 
Query:  979 FVRGVEQRYTPHPFHNLTHAVSVTHASFVIIKTTRVDSLLRPLDKLALLVAALCHDIDHPGNNNDYEVKSLSPLALQHGDSSVLERHHIFVTYQVLLQEGGANNIFSELTRAEFQDARQMIVKAILGTDMSNHMQHCADVFHFAQKAKRLRTGGGRGAAADWSTTRQGKDHGKGSPRQQRSKSEVTAPPGTPRGGEGGTMGPLPLLPXXXXXXXPSPSTPPAHVFSLDRPEDRYFLTQTIVHCADLSGQVLKTPLALEWGRRILEEFRRQAALEASAGLPLTTIMSGDMETTMKGQHFFVAKIVKPLWEPFVVLFPELSPLLRNLHKNCDYYFREGERLEQ 2001
            F++ V+  Y P+PFHN  H   V H ++ I+K T   ++L+P D+   L+AALCHDIDHPG++N +EV S SPLAL H D +VLERHH   T+++L  +    NI   L+  E++ AR++IV+AI+GTDM+ H +H         +A   R          W    + KD                                 PL+          P    A        EDR F  Q+IVH +DL  QV  TP+AL+W   I +EF  QA +E + GLP+T +   D    ++ QHFF A++V+PLW   V   P+L   L NL KN  +Y  E  RL+Q
Sbjct:  475 FIQVVQDHYHPNPFHNFIHGFDVLHTAYCILKDTSAITVLQPADRFGCLIAALCHDIDHPGHSNVFEVNSKSPLALLHNDDAVLERHHAATTFRLL--QNDQVNILKGLSPDEYRYARKVIVRAIIGTDMALHFEHI--------EAMEKR----------WMPYARPKD---------------------------------PLV----CSLEDHPPVGSALACFAKSAEDRIFFVQSIVHASDLGAQVFPTPIALKWSNMIAKEFAYQALMETAEGLPVTHLHVDDPLHMVESQHFFAARLVQPLWNCLVRFLPQLEHCLVNLEKNIAHYQTEIRRLKQ 758
[Close]
BLAST of mRNA_L-elsbetiae_contig5608.13942.1 vs. uniprot
Match: T0QAR6_SAPDV (Phosphodiesterase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QAR6_SAPDV)

HSP 1 Score: 202 bits (513), Expect = 4.860e-50
Identity = 124/341 (36.36%), Postives = 174/341 (51.03%), Query Frame = 1 
Query:  979 FVRGVEQRYTPHPFHNLTHAVSVTHASFVIIKTTRVDSLLRPLDKLALLVAALCHDIDHPGNNNDYEVKSLSPLALQHGDSSVLERHHIFVTYQVLLQEGGANNIFSELTRAEFQDARQMIVKAILGTDMSNHMQHCADVFHFAQKAKRLRTGGGRGAAADWSTTRQGKDHGKGSPRQQRSKSEVTAPPGTPRGGEGGTMGPLPLLPXXXXXXXPSPSTPPAHVFSLDRPEDRYFLTQTIVHCADLSGQVLKTPLALEWGRRILEEFRRQAALEASAGLPLTTIMSGDMETTMKGQHFFVAKIVKPLWEPFVVLFPELSPLLRNLHKNCDYYFREGERLEQ 2001
            F++ V+  Y P+PFHN  H  SV H S+ I+K T+  ++L P D+   L+A+LCHDIDHPG++N +EV S S LAL H D +VLERHH   T+++L  +    NI + LT  E++  R++IV+AI+GTDM+ H +H   +       KR            W+   +  D                                 PLL               A        +DR FL QTIVH +DL  QV  TP+AL+W   I +EF  QA +E + GLP+T +   D    ++ QHFF A++V+PLW   V   P+L   L NLHKN  +Y +E  RL+Q
Sbjct:  519 FIQSVQDHYHPNPFHNFLHGFSVLHTSYCILKETQAVTVLTPPDRFGCLLASLCHDIDHPGHSNVFEVNSKSGLALLHNDDAVLERHHAATTFRLL--QNDHVNILAGLTPDEYRYTRKVIVRAIIGTDMARHFEHIEAL------EKR------------WAPYARTTD---------------------------------PLLDDKRS----------ALANFAKSGDDRIFLVQTIVHASDLGAQVFPTPIALKWSNMIAKEFAYQALMETAEGLPVTHLHVDDPLHMVESQHFFAARLVQPLWSCLVRFLPKLDHRLVNLHKNIAHYEQEIRRLKQ 796
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5608.13942.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G099_ECTSI5.400e-13660.85Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
D7G095_ECTSI3.250e-13562.37Phosphodiesterase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KY22_9PHAE9.830e-13461.62Phosphodiesterase n=1 Tax=Ectocarpus sp. CCAP 1310... [more]
A0A8K1CS64_PYTOL1.750e-5335.75Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y2B9_9STRA1.410e-5235.05Phosphodiesterase n=1 Tax=Pythium brassicum TaxID=... [more]
A0A3R6W911_9STRA5.020e-5137.50Phosphodiesterase (Fragment) n=1 Tax=Aphanomyces a... [more]
A0A024UQT8_9STRA6.450e-5137.64Phosphodiesterase n=2 Tax=Aphanomyces invadans Tax... [more]
A0A485LDF6_9STRA4.750e-5037.21Phosphodiesterase n=1 Tax=Aphanomyces stellatus Ta... [more]
A0A1W0A9L1_9STRA4.790e-5036.07Phosphodiesterase n=1 Tax=Thraustotheca clavata Ta... [more]
T0QAR6_SAPDV4.860e-5036.36Phosphodiesterase n=2 Tax=Saprolegnia TaxID=4769 R... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5608contigL-elsbetiae_contig5608:2974..11037 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score454.1
Seed ortholog evalue7.2e-125
Seed eggNOG ortholog2880.D7G099
Hectar predicted targeting categoryother localisation
EggNOG free text desc.3',5'-cyclic-nucleotide phosphodiesterase activity
EggNOG OGsKOG3689@1,KOG3689@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2952
Cds size1317
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5608.13942.1prot_L-elsbetiae_contig5608.13942.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5608 3760..10188 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816595.8544374-UTR-L-elsbetiae_contig5608:2973..37591622816595.8544374-UTR-L-elsbetiae_contig5608:2973..3759Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5608 2974..3759 -
1691683672.8452644-UTR-L-elsbetiae_contig5608:2973..37591691683672.8452644-UTR-L-elsbetiae_contig5608:2973..3759Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5608 2974..3759 -
1622816595.9421363-UTR-L-elsbetiae_contig5608:10188..110371622816595.9421363-UTR-L-elsbetiae_contig5608:10188..11037Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5608 10189..11037 -
1691683672.9158347-UTR-L-elsbetiae_contig5608:10188..110371691683672.9158347-UTR-L-elsbetiae_contig5608:10188..11037Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig5608 10189..11037 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816595.8659322-CDS-L-elsbetiae_contig5608:3759..40411622816595.8659322-CDS-L-elsbetiae_contig5608:3759..4041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5608 3760..4041 -
1691683672.8596196-CDS-L-elsbetiae_contig5608:3759..40411691683672.8596196-CDS-L-elsbetiae_contig5608:3759..4041Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5608 3760..4041 -
1622816595.8793554-CDS-L-elsbetiae_contig5608:5039..52171622816595.8793554-CDS-L-elsbetiae_contig5608:5039..5217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5608 5040..5217 -
1691683672.8689775-CDS-L-elsbetiae_contig5608:5039..52171691683672.8689775-CDS-L-elsbetiae_contig5608:5039..5217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5608 5040..5217 -
1622816595.8925614-CDS-L-elsbetiae_contig5608:6087..65331622816595.8925614-CDS-L-elsbetiae_contig5608:6087..6533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5608 6088..6533 -
1691683672.8781276-CDS-L-elsbetiae_contig5608:6087..65331691683672.8781276-CDS-L-elsbetiae_contig5608:6087..6533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5608 6088..6533 -
1622816595.9054077-CDS-L-elsbetiae_contig5608:8561..86611622816595.9054077-CDS-L-elsbetiae_contig5608:8561..8661Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5608 8562..8661 -
1691683672.8868282-CDS-L-elsbetiae_contig5608:8561..86611691683672.8868282-CDS-L-elsbetiae_contig5608:8561..8661Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5608 8562..8661 -
1622816595.9160686-CDS-L-elsbetiae_contig5608:9376..95821622816595.9160686-CDS-L-elsbetiae_contig5608:9376..9582Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5608 9377..9582 -
1691683672.8954732-CDS-L-elsbetiae_contig5608:9376..95821691683672.8954732-CDS-L-elsbetiae_contig5608:9376..9582Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5608 9377..9582 -
1622816595.9308333-CDS-L-elsbetiae_contig5608:10083..101881622816595.9308333-CDS-L-elsbetiae_contig5608:10083..10188Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5608 10084..10188 -
1691683672.9043539-CDS-L-elsbetiae_contig5608:10083..101881691683672.9043539-CDS-L-elsbetiae_contig5608:10083..10188Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5608 10084..10188 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5608.13942.1

>prot_L-elsbetiae_contig5608.13942.1 ID=prot_L-elsbetiae_contig5608.13942.1|Name=mRNA_L-elsbetiae_contig5608.13942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=439bp
MEQDGHVEELPGVGQLQQRPTCRVFLPPTQPFLSKISDLKMGGFVRGVEQ
RYTPHPFHNLTHAVSVTHASFVIIKTTRVDSLLRPLDKLALLVAALCHDI
DHPGNNNDYEVKSLSPLALQHGDSSVLERHHIFVTYQVLLQEGGANNIFS
ELTRAEFQDARQMIVKAILGTDMSNHMQHCADVFHFAQKAKRLRTGGGRG
AAADWSTTRQGKDHGKGSPRQQRSKSEVTAPPGTPRGGEGGTMGPLPLLP
PLQPPFQPSPSTPPAHVFSLDRPEDRYFLTQTIVHCADLSGQVLKTPLAL
EWGRRILEEFRRQAALEASAGLPLTTIMSGDMETTMKGQHFFVAKIVKPL
WEPFVVLFPELSPLLRNLHKNCDYYFREGERLEQERLAVATVPAPSSRAN
SGKNMTGGGGGRREEGLADTEIRRQGLKGPLATTAMTG*
back to top

mRNA from alignment at L-elsbetiae_contig5608:2974..11037-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5608.13942.1 ID=mRNA_L-elsbetiae_contig5608.13942.1|Name=mRNA_L-elsbetiae_contig5608.13942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8064bp|location=Sequence derived from alignment at L-elsbetiae_contig5608:2974..11037- (Laminarionema elsbetiae ELsaHSoW15)
TTCCGGGGGTGTGGCAGCAGGATGCTAAGGGGCGAACTGGAAAGTGCACT
TGAGTGCGCTTTTGGGAGGGCCCGTGCGGTTGATTTTTGGCGTACCCAAA
AAAGGGCTTCTAAAACATTCAGTGAATCGTGCTCATCACTGAGCCCCTGG
ATCCAAAGTACACTGTGGCCCCCCCCCCTACCCGTAGCCTTAACCTGTAT
CGGGCCGTGAAAAACACGTCGCCCTCTGTTTGTGTGTGCGAGCGCGAGGA
CTCTGTGAACTACTCACTGCGGACTCTTGTGGGAGGCGCCCCTGTGATGT
AAGCGTGCTCTTCTATGAACTCGTAGCTAGAGAGTGCGAGACAGTGGTCT
GCCCGGAGAGAGAAGGGTCCCCGTGATATACAGATGACCATACCAATACA
CCAACTGCGTATCACCCATATCCATCCCAGATCACTATCTTGGCCCAAGT
ACCACACAGACACCCTCCCATGCATTTATGCGTTCTCCCGCGCGCCGTTT
ACGGCAGTCGGCACGTCGTTTCTTGACCCTAGCTGGCGTGCTCTGCCTGT
CCATAAATAAGCGTAGGCTTCGTTTGGTTCTATGGGTTGTTGTTTTCTTT
ACGTTCAAAATGGGCAGGTTTACTGAAGCCGTGCAGGTGCGGAACAAACG
GATATTTATTGAATGAAACCGTCGAATTTATTTAGATTGGTTCCGAAGGA
GTTTGCCGATGTTTTGGGGTACTCGGGGTGAGTTGAATTAAGCGGCACGG
GGCCCCTACTATTTGAGTAGAAGGTGCCTCACTTTTGTGGGAGCCACCTG
TCTGTTCACCTCGAGAGTTTTAGCGCTCCAGGAAGCGTAGCACAGAGGAA
TGGAGCAAGATGGACACGTAGAAGAGCTTCCAGGAGTTGGTCAGCTTCAG
CAGCGGCCAACATGTCGAGTCTTTTTACCGCCCACCCAACCTTTTCTGTC
GAAGGTGGGAGAGAGGAGAAGATCCGGTATCGTAGCCAGAAACGCTGTTC
TAGTTTAGCGTAGGAAATGGCAGAATACCGTTCGGGGACTTTGTCATCCG
AGCCTACTGCTTGCAGTAAGAGTAGTTCCCTTCACCGGAGGATGTAGAAT
CCTCGGTTGTTGTCACGGAGGGGAGAGGTAGTGTTTGAGCAGAGAGGCAG
AGACACGGTCCAGTTGGCGCAGAAATGTGTCTGCGGGACGTGGCTCTGCC
ACGTCGATATTTCCCTCTTCCCTCAGGGGTCTCGGAAATTTTTCCAAATT
CGAAAGAAACAAAACAATAAACGTCGAGGTCGCTGTTCCGCAGGTTGTTG
GCCGATCAGAAAACTGCGTGCCACAAATAAATCCTGTTCTCTCGAAACTG
ACGCGGATTCACAAACAAACTCGTGCCCAGTCTCCAGGCGCCCCCCCCTC
TGAGCTCCTTTTCGCTACGCTTGCTGTACGACCTATGTGTGTATGCATCT
CCCAGATTTCGGACCTGAAGATGGGAGGCTTCGTGCGAGGGGTCGAGCAG
CGGTATACCCCTCACCCGTTCCACAACCTGACCCACGCCGTGAGCGTCAC
CCACGCGTCCTTCGTGATCATCAAGACCACGCGGGTCGACTCCCTGCTCC
GCCCGCTGGATAAGCTCGCCCTCCTTGTCGCAGCGCTCTGTCACGACATC
GACCACCCGGGGTAAGTAAGCGAGGAATTACGTAGCCCCCTTTCTCTGCG
TTCGTTCCCCCCGGGGGGGGGACGAACTCCGTTGCCGATTTGTTCCACGA
CCGAGAGGGCACGATTACTGGAGGTTTTAATTGGGTTTGGAAGGATCTCG
ACGATATGTTTTCGAATGACGCATCTCTTCACCATTGCAGAGAAAACCCT
GCAATTAAGCCCTTCTCCCCCCCCCGGGACTCGCATCAGGGGGATACGGT
AGTTCTCGCGCTGGCTGCCTAGATTAAGATCTCCCCATTTGTCACCTAAC
GTAGCGTGTCGAGGGGAGCGGAGGGCGCGCCAGACTATCTCTGTATGATC
TTTTGTTTTTTGTGCTTGGCGGAACCTTTGGTCCACCTTGTTTTCTTCAT
TTGGGACTGTCTATATGTATCCATCTTTTTAGGGTAAGTTTTTCTGCGAC
AAACCGGAATCGACCGTGTCAGTGTTAGACTAGTACGGACTGATGGAGGT
TCTGGATGGAGAGACCTGAACCTTTTTTGTAATGTGAAGACAACAACACA
ACAACAACAACACTATGCTGGCTGGCGGAACGCATGTTTTCGCGGCTGTT
GACAGCGTCGAATCGGATCTTCGACAGGCAGACGGGTACGACACATTTCG
GACCGCATGACGAAAGAACCCCACCTTACCGTCCCGTCCCGTTAAATGCG
AACGGCATGTTTGTACGTATGCCCAGGAACAACAACGACTACGAGGTGAA
ATCCCTCTCACCGCTGGCGTTGCAGCACGGCGATAGCTCGGTGCTGGAGC
GCCATCACATTTTCGTCACGTATCAGGTGCGCATCGTAGGCCGCATCTAG
CCGGGTGGCGAGAGAGCGAAAATAGTAAGGAGTATCAAATTCGAGCCGTG
ATTGATCGAGACCAGATAGGTACTGATTTTTTTCCGTGGGATTTTAGAAC
CTTTGCATCTTGAATTTATGGGACCAACATTTATATTTTATTAAAACACA
AAAAAATGCCTCTTTTTTTCGCTTTTAGGCCGTTTTTCATGGTTGTTATT
TTTAGATTCTTATTGGAGGGGGTTGGTCATTTACACGAGAAAAAATAAGC
TGGGCCGAGGGGCCTTCTTACGGGTCGTGAAACGTTTTTTTTTCGTGCGG
AAAAAAAAAGCATATTCGCGTTTTCAGCTCGAATTATTCGGCTGACAACT
CTGGCGAGTTATTGGGTACCGGCGCAAACACGTTACCATCCGGCAGCTTT
CCTACGCCCAGGCCCGTAAGCGGGTGGGATACCAGAGCGTGAAAGCAACT
GTCTGACAGCGGTGGCTGCTGCTTCCCGGGGCCTTGGCGAGGCAGCCGAA
CGGGCGACTCCCCAATCGACCGATGTCCGGCAAACTGGCGGGGGGGAGAG
AACCCGGGCAGGGGATGCGCGGAGCAGAGCTAGGAGATGTGCCTGAAGGA
CGAATTGAAGGCGTTCGAAATCCCCATCGCCGATCGGGCGACAACAGCGA
AGGCGGAGGAGGGAAGGAAGCGGCACGAGGGGGGCTGAGAGGGTTATGCC
CTCCTGCCACAAGGGGGAGGAGGAGGAGGAGGCTAGCTGACAATGGGCGA
TCAAACGAGGCAACAAGGGCCAAGCAATAAAATGGTCACAGCAACAACCA
AGGGGGGAAAGGGACCGGAGGCGATCGAACCTGCGCGCGACGCACGTCAT
GTTGCGCTTTGAACTATTGACTAATCTCTCCCCTCCCCCATCCCCCACTG
CTATATATCATGTCGCAACACCACCGGGGAAGCGGTGACGTGCTTGTTCG
TCTGGGATTTTTGCGTATGCCTGTTTTTTTGTTGTTTGTTGTGTTTGTTC
GTTTTGTAATTTCGGCCTGGTTATTGCCCGATATCCTTTCCCTCTTGCTG
TAGCATGTGTGCGGTACAATAAGTCGGGAGAACTAGGTTGGTGGGCCTCA
CCGGCGAGAACCTGGCGTGGAATACCTCGGCATTGTTGGGATACCAAGAT
GGAACCAGGGGCGGTTGGTGATGTTGGCTTTTTTTATGTTTTTTTTTCAC
TCACCTCCAATAGCGTGCAAAGGGAAGCGGAGGGCTCTAGACTGTCTGTG
TCTGATCCTTTGGGTTTGTATGTACTTTGTGGATCCCTCGGGCCCATTTT
TGTATTTGATGTATTCCATTATACCCTTTCTAGGGTAAGTGTTCCTGTGA
CCACAGGAATCGACCGCGTCAGTGCTGGATTCGCACAGACTCTTGGAGGT
ACTGGGTAGAGGGATCGGGACGGTTTTTAATGTGAAGACGACAACAACGA
GATGGACGTATTGGGTAGAGAAATCGGAACGGTTTTAAATGTGAAGACAA
CAACAAGATCGAGGTACTGGGTGGAGAGAGCAGAACGGTTTTTAAGGTGA
AGACAGCAACAGTAAGATGGAGGTACTGGGTGGAGAGAGCAGAACAGTAT
TTAAGGTGAAGACAGCAACAGGAACAAGATGGAGATACTGGGTAGAGAGA
TCGGAACGCTTTATTTTGTGAAAACAACAACAACAAGTGCCGGTTTAGTG
CGTCATGACGCATATACTCTACCGGCTGTCGGGTGCTCAAGAACCACGAT
GAACGTATCTCGTGGCTATCTTGATGTCGCAGTGCCTCGTACCCTGGGGC
AGCGGAGCAAATCAGAACAGCTTGTTTGAACCGGGCTCTTTTGATGATTA
TGCATCTGCATACAGCACTCGTGGATCCTTGCGCGCCGCCTGACAACAAT
AATATACCCTAACGAGAACAACAACAACAACAACAAAAACAACAAAAACA
ACAAAAACAACAAACCCAAGAAGAGCGAACGAAACAAAACGCGCGCCCCC
GCAGGTGCTACTCCAGGAGGGCGGGGCGAACAACATTTTCTCTGAGCTTA
CCCGCGCCGAGTTCCAGGACGCCCGCCAGATGATCGTGAAGGCCATCCTT
GGCACGGATATGTCCAACCATATGCAGCACTGCGCCGACGTCTTTCATTT
CGCGCAGAAGGCTAAACGACTACGAACGGGTGGGGGGAGGGGAGCAGCGG
CGGACTGGAGCACCACCCGGCAGGGAAAGGACCACGGAAAAGGCTCTCCT
CGGCAACAACGGTCCAAATCGGAAGTCACTGCACCGCCCGGAACGCCCCG
GGGTGGGGAGGGCGGAACCATGGGGCCGCTGCCGCTGTTACCACCGTTAC
AACCGCCGTTCCAACCGTCGCCGTCGACACCGCCGGCGCACGTTTTTAGC
TTGGACAGGCCGGAGGACCGGTATTTTCTCACGCAGACCATCGTGCACTG
GTGTGTGTGCGTCTCGCATGTTACTTTGTTTTAATTCATGTATACAAATG
TCAGCAGGCTACGTCCAGTCTGTGAAAAAGTCGTTCGAGAGGTTGTGTGT
GTGTAGATCTATGTGTGTGTGTGCGTAAGGCGGAGTGCATGGCTCGCGAC
ATGAGGGTGAGGGTCGGAAATACGCGGAGACAGCTCAGTAGCTGATGGGG
GGTTCTTCCAGCAGGGTAGTTGGGAGACGGAGCCCCCGTAAAATGAATGC
CTTGAAGAGGACGCGCGGTCAAAGGTCAAATAGAGACAGGCAACGAGTCA
AGCGCGCCTATTTTCTGATGTCGATATCGATATGTATCAGACGACGTGCT
CGATGGGCTCCTTGTCACGAGGACATCTGACCAGGGTACTGAACCTTGGT
CACACAGAAGGGTTCCTTTCCCCAAGGCCCCCGCTACCCCCTTCTGCGGT
GCTTGCCTGAGATTTTTGTCGCGAGGAGGGTTCAGCCGTCCCTTTCCCTC
GTCGACGGTGAGGTCGAAGTTTGTGTTACACAGCTCTATCAAACGGAGAC
AAGCAGCGAGTTGAGCGCGTCGCTCTCCTCGCCGCTGCCGCCCGGTTGGT
AAGGGTTCCGGTGCGTAGGAACCCGGACGGCGGCAACGTGGTCCCTAGAA
AATGTGTGCAATTCGCCATTGGTTTGGCCAGGAAGCCTGTACAACACGCG
TGTATGTATACGCCACATATGCATGTATCATGGTATGCGTTGTTTTCCCA
ATCGAAAAACACATACCTACGGTGGTTTTCAACTCCATATATCTAAACGT
ATGGGCTTCACAACCCCCTCGCCCGGGTGGTTGTCGTTGTGGTCTTTCCT
GCCTGCCTGCCTGGGTGCAGCGCCGACCTTTCTGGACAGGTGCTGAAAAC
CCCCTTGGCCCTGGAGTGGGGGCGGCGCATCCTCGAGGAGTTTCGGCGGC
AAGCCGCCCTCGAGGCTTCGGCGGGCTTGCCGCTGACGACCATAATGAGC
GGCGACATGGAGACGACGATGAAGGGCCAGCACTTCTTTGTGGCCAAGGT
TGGTTTTCGGAGTCGGGTTCGGTGGGGCAGGTTTGTGTCTGTCTGGTTTG
GTTCGGTAGTCGCGGCGTGGCGTGGCACACGGGGTTGACAATTACTGCAG
GTATTGTGGATGCAAGGGTCTATCAGGAGGAAAGTTCGATACACGTGGGC
CCCTAAATCGAAATTTCGAGTTCCCGGGGGGGGGGTATACTGTAGCCTTT
TAAGTTTCCAGTGGGGGCCCCGCATATAACGGTGGGCGTAGTGGGGGGGG
TGGGAGTTGAATAAAACCGAACGGATCCCCGTATGCTAGTTCCTACATAG
ACCAAAATCGAACATTTTTTTGGGGGGGGGGTCCGGAATTTTCCTCCTGA
TAGCCCCTTGGTTGGTGGGTGTGTTTCTCGTGTCTGCGCATCTTGTGGAA
GAACCGACGAGAGTGTGTGCCCACACCGGGAGTGGTGCAAAGTTATAGTA
GGCCGATGCTGATGTATGCCCCTCAAAATTTAGAGAAATGTTAAATGTTT
ACTCTCATCGGATTATTTTTGCACCATCGATTTGAGGCTCCTTAATCCCG
CCCACGCTCCTGGTACGTATCAACGAGCAGGGGGATAGGTTTCAACGGCA
GGTAAACCATAAACGTGATTCAGCGGCCGTAAGCGATCGAGTTCACGTGT
GCAGAAGCAGCCTGAATACTATCCTGCTTCTACCGAAGATCGCATCGGCG
CCCAGCGCGTCTAGAACAAGCTCCGCCCCGTGGCTCGTGACTCTCCGTTT
GGCAGATACCCGGCGGTGTTTTTTGTCGTAAATGTTTGATGTACATTGCA
TGGCATTATCAGTTTCGGCCGTTCCATCCATCCCCTCTTTCTTCCCTCTC
GACAGTCAGACCATTGTCCGACAAACGCTCTTGCTGGCCCTGGACTCTCG
CACGCAAGTATGGTCTTCATTTTTCGCTCCCTCCTTCTCCCGCACTCGAC
CTTTGACTCCTCCTGCACCTGGCCCTATCCCTTCGCCGTCGCCCAGATCG
TCAAACCCCTGTGGGAGCCTTTCGTGGTGCTTTTCCCCGAGCTTTCCCCC
CTCTTGAGAAACTTACACAAGAACTGCGACTACTACTTCCGGGAGGGGGA
ACGATTAGAACAGGAACGGCTCGCCGTGGCCACCGTCCCGGCCCCGTCAA
GCAGAGCCAACAGCGGCAAGAACATGACCGGCGGCGGTGGCGGCCGCCGC
GAAGAAGGCTTAGCGGACACGGAGATTAGGCGACAAGGGCTAAAGGGGCC
TCTTGCGACGACGGCCATGACGGGGTAAAGGCATCGCGACCATCGCATCG
CTCTCGATGATAGCCTCCTTGGCGCCCTTCGCCTCCAGCAAGGTTGGCGA
GCCACCGAAAAGTTCACCATGGGCCGGGGGAGGCGGCGGGCCGCAGGAGC
TATCTAGGAAGTGTGTCCATGTGGACTAGGAAGCGTGTGGGAGTGGTGAA
CATAAACACCAGACCCGCCATGTCGGAAAGAGTGGGCGAAAGAGTGCGAA
AAGTTTGAATCAAAGCGACGTGTGAGCGACCCTCCCAGGATATAGCTCCA
CGGAGATGTCCGCGGGCGTTTCCGCAGGCGACACATGATGATTGGAACAG
TGTCCATGGGTTTTCCATCGGCTTCCGTCGATCTCAATATATATATATGT
AGTGTAATGGAATTATGTTGTTGGACGTGCCAAACCAACGGGGGGCGGGG
GCTTAGTATGGTTGAAGGTCCGTGCACAACAATTTGTCCAACCAGGTTTT
TTCCTGCCGAAACTGTCGAAAGGAGTCGATATTCCCGGAGTTTCAACCAT
CCTAGTAATCCCCAAACCACTATTCATTTATTTCTTCAGGACAAGTAGGC
CCCAAGATCGAAGTTTAGAGTTTTTTTTTTGGGGGGGGGTGGGGTATTCT
CAAGCTCTTAGCTTGGGTCTCTCCAACCACCGTTTTTGTCTGTCTGTCTG
TCCGCACAAAATCATTCGTGCGAAGCCCCAAACGATCGGGTCTCAAAGTA
CGATATCTGTCCACACTACAAGCTTTGCGATATTAATAGTATCTCTGTGT
AGCTGAGACGATCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5608:2974..11037-

>mRNA_L-elsbetiae_contig5608.13942.1 ID=mRNA_L-elsbetiae_contig5608.13942.1|Name=mRNA_L-elsbetiae_contig5608.13942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2634bp|location=Sequence derived from alignment at L-elsbetiae_contig5608:2974..11037- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGCAAGATGGACACGTAGAAGAGCTTCCAGGAGTTGGTCAGCTTCA
GCAGCGGCCAACATGTCGAGTCTTTTTACCGCCCACCCAACCTTTTCTGT
CGAAGATGGAGCAAGATGGACACGTAGAAGAGCTTCCAGGAGTTGGTCAG
CTTCAGCAGCGGCCAACATGTCGAGTCTTTTTACCGCCCACCCAACCTTT
TCTGTCGAAGATTTCGGACCTGAAGATGGGAGGCTTCGTGCGAGGGGTCG
AGCAGCGGTATACCCCTCACCCGTTCCACAACCTGACCCACGCCGTGAGC
GTCACCCACGCGTCCTTCGTGATCATCAAGACCACGCGGGTCGACTCCCT
GCTCCGCCCGCTGGATAAGCTCGCCCTCCTTGTCGCAGCGCTCTGTCACG
ACATCGACCACCCGGGATTTCGGACCTGAAGATGGGAGGCTTCGTGCGAG
GGGTCGAGCAGCGGTATACCCCTCACCCGTTCCACAACCTGACCCACGCC
GTGAGCGTCACCCACGCGTCCTTCGTGATCATCAAGACCACGCGGGTCGA
CTCCCTGCTCCGCCCGCTGGATAAGCTCGCCCTCCTTGTCGCAGCGCTCT
GTCACGACATCGACCACCCGGGGAACAACAACGACTACGAGGTGAAATCC
CTCTCACCGCTGGCGTTGCAGCACGGCGATAGCTCGGTGCTGGAGCGCCA
TCACATTTTCGTCACGTATCAGGAACAACAACGACTACGAGGTGAAATCC
CTCTCACCGCTGGCGTTGCAGCACGGCGATAGCTCGGTGCTGGAGCGCCA
TCACATTTTCGTCACGTATCAGGTGCTACTCCAGGAGGGCGGGGCGAACA
ACATTTTCTCTGAGCTTACCCGCGCCGAGTTCCAGGACGCCCGCCAGATG
ATCGTGAAGGCCATCCTTGGCACGGATATGTCCAACCATATGCAGCACTG
CGCCGACGTCTTTCATTTCGCGCAGAAGGCTAAACGACTACGAACGGGTG
GGGGGAGGGGAGCAGCGGCGGACTGGAGCACCACCCGGCAGGGAAAGGAC
CACGGAAAAGGCTCTCCTCGGCAACAACGGTCCAAATCGGAAGTCACTGC
ACCGCCCGGAACGCCCCGGGGTGGGGAGGGCGGAACCATGGGGCCGCTGC
CGCTGTTACCACCGTTACAACCGCCGTTCCAACCGTCGCCGTCGACACCG
CCGGCGCACGTTTTTAGCTTGGACAGGCCGGAGGACCGGTATTTTCTCAC
GCAGACCATCGTGCACTGGTGCTACTCCAGGAGGGCGGGGCGAACAACAT
TTTCTCTGAGCTTACCCGCGCCGAGTTCCAGGACGCCCGCCAGATGATCG
TGAAGGCCATCCTTGGCACGGATATGTCCAACCATATGCAGCACTGCGCC
GACGTCTTTCATTTCGCGCAGAAGGCTAAACGACTACGAACGGGTGGGGG
GAGGGGAGCAGCGGCGGACTGGAGCACCACCCGGCAGGGAAAGGACCACG
GAAAAGGCTCTCCTCGGCAACAACGGTCCAAATCGGAAGTCACTGCACCG
CCCGGAACGCCCCGGGGTGGGGAGGGCGGAACCATGGGGCCGCTGCCGCT
GTTACCACCGTTACAACCGCCGTTCCAACCGTCGCCGTCGACACCGCCGG
CGCACGTTTTTAGCTTGGACAGGCCGGAGGACCGGTATTTTCTCACGCAG
ACCATCGTGCACTGCGCCGACCTTTCTGGACAGGTGCTGAAAACCCCCTT
GGCCCTGGAGTGGGGGCGGCGCATCCTCGAGGAGTTTCGGCGGCAAGCCG
CCCTCGAGGCTTCGGCGGGCTTGCCGCTGACGACCATAATGAGCGGCGAC
ATGGAGACGACGATGAAGGGCCAGCACTTCTTTGTGGCCAAGCGCCGACC
TTTCTGGACAGGTGCTGAAAACCCCCTTGGCCCTGGAGTGGGGGCGGCGC
ATCCTCGAGGAGTTTCGGCGGCAAGCCGCCCTCGAGGCTTCGGCGGGCTT
GCCGCTGACGACCATAATGAGCGGCGACATGGAGACGACGATGAAGGGCC
AGCACTTCTTTGTGGCCAAGATCGTCAAACCCCTGTGGGAGCCTTTCGTG
GTGCTTTTCCCCGAGCTTTCCCCCCTCTTGAGAAACTTACACAAGAACTG
CGACTACTACTTCCGGGAGGGGGAACGATTAGAACAGGAACGGCTCGCCG
TGGCCACCGTCCCGGCCCCGTCAAGCAGAGCCAACAGCGGCAAGAACATG
ACCGGCGGCGGTGGCGGCCGCCGCGAAGAAGGCTTAGCGGACACGGAGAT
TAGGCGACAAGGGCTAAAGGGGCCTCTTGCGACGACGGCCATGACGGGGT
AAATCGTCAAACCCCTGTGGGAGCCTTTCGTGGTGCTTTTCCCCGAGCTT
TCCCCCCTCTTGAGAAACTTACACAAGAACTGCGACTACTACTTCCGGGA
GGGGGAACGATTAGAACAGGAACGGCTCGCCGTGGCCACCGTCCCGGCCC
CGTCAAGCAGAGCCAACAGCGGCAAGAACATGACCGGCGGCGGTGGCGGC
CGCCGCGAAGAAGGCTTAGCGGACACGGAGATTAGGCGACAAGGGCTAAA
GGGGCCTCTTGCGACGACGGCCATGACGGGGTAA
back to top