mRNA_L-elsbetiae_contig5605.13939.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5605.13939.1 vs. uniprot
Match: A0A6H5KMP7_9PHAE (Ricin B-type lectin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KMP7_9PHAE) HSP 1 Score: 150 bits (379), Expect = 4.790e-34 Identity = 97/192 (50.52%), Postives = 110/192 (57.29%), Query Frame = 3 Query: 189 LHASSLDMVRRPTPVVTAFSSC-VGFPTAAVHKLSSLRCVLIQGHGDIVDMLLATKCNKDAADKDGTNALMAAASNGHLEAATSLVKAGAALDKQNSDGHSALMFAYNGRAQVASLMDKYAEYLDDADDASGESTKMMREAMAHTQSIIDLLLTSGADPSLKDTEGRMAKDFDYQPPAEGEEGAEDASKMEL 761 +HAS M + ++ A +S V A+ ++ L ++GH DIVDML+ KCN FAYNGRAQVASLMDKYAEYLDDADDASGEST MMREAMAHTQSIIDLLLTSGAD SLKD EGR AKDFDYQPPAE + DA+KMEL Sbjct: 667 VHASHAKMPKVVKALLEAPASAGVDKDAASDEGVTPLIAAAMKGHVDIVDMLIGAKCNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAYNGRAQVASLMDKYAEYLDDADDASGESTNMMREAMAHTQSIIDLLLTSGADASLKDKEGRTAKDFDYQPPAE--DAGADATKMEL 856
BLAST of mRNA_L-elsbetiae_contig5605.13939.1 vs. uniprot
Match: A0A7S3GQ79_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQ79_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.030e-19 Identity = 59/134 (44.03%), Postives = 86/134 (64.18%), Query Frame = 3 Query: 324 DIVDMLLATKC-NKDAADKDGTNALMAAASNGHLEAATSLVKAGAALDKQNSDGHSALMFAYNGRAQVASLMDKYAEYLDDADDASGESTKMMREAMAHTQSIIDLLLTSGADPSLKDTEGRMAKDFDYQPPAE 722 +IV++LLAT+ + DA DKD L+ GA +D QN DGH+ALMFAYNG+ QV +L+DKY++YL D +D STK++R+A+ ++ LL+ SGA+ +++D EG +A DFDY+ PAE Sbjct: 253 EIVELLLATQLIDIDAKDKDXXXXXXXXXXXXXXXXXAQLILKGANVDAQNVDGHTALMFAYNGKNQVETLLDKYSDYLRDVND---NSTKLIRDALETHVEVVHLLIRSGANVAIQDNEGHIASDFDYKSPAE 383
BLAST of mRNA_L-elsbetiae_contig5605.13939.1 vs. uniprot
Match: A0A7R9U5G3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5G3_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.190e-18 Identity = 52/95 (54.74%), Postives = 70/95 (73.68%), Query Frame = 3 Query: 459 LDKQNSDGHSALMFAYNGRAQVASLMDKYAEYLDDADDASGESTKMMREAMAHTQSIIDLLLTSGADPSLKDTEGRMAKDFDYQPPA-EGEEGAE 740 LD QN DGH+ALMFAYNG++QVA+L+DKY EY+ D +D +T +++EA+ +++LLL GA+P +KD EG A DFDY PPA E E+GAE Sbjct: 747 LDAQNDDGHTALMFAYNGKSQVATLLDKYTEYIKDEND---NNTALIKEALTTHTKVVNLLLEGGANPDVKDKEGHTAIDFDYVPPAAETEQGAE 838
BLAST of mRNA_L-elsbetiae_contig5605.13939.1 vs. uniprot
Match: A0A6U4F0Y7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F0Y7_9STRA) HSP 1 Score: 100 bits (250), Expect = 2.880e-18 Identity = 54/104 (51.92%), Postives = 71/104 (68.27%), Query Frame = 3 Query: 450 GAALDKQNSDGHSALMFAYNGRAQVASLMDKYAEYLDDADDASGESTKMMREAMAHTQSIIDLLLTSGADPSLKDTEGRMAKDFDYQPPAEGEEGAEDASKMEL 761 GA LD QN DGH+ALMFAYNG++QVASL+DKY EY+ D +D +T ++REA+ ++++LL GA+P +KD EG A DFD+ P A EEG A EL Sbjct: 745 GADLDAQNVDGHTALMFAYNGKSQVASLLDKYTEYVQDEND---NNTALIREALTTHTKVVNVLLEGGANPDVKDKEGHTAIDFDFVPAAPTEEGEAAAGGDEL 845
BLAST of mRNA_L-elsbetiae_contig5605.13939.1 vs. uniprot
Match: A0A7S1GGD5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GGD5_CYCTE) HSP 1 Score: 96.7 bits (239), Expect = 2.180e-17 Identity = 58/162 (35.80%), Postives = 96/162 (59.26%), Query Frame = 3 Query: 312 QGHGDIVDMLLATK-CNKDAADKDGTNALMAAASNGHLEAATSLVKAGAALDKQNSDGHSALMFAYNGRAQVASLMDKYAEYLDDAD---DASGESTKMMREAMAHTQSIIDLLLTSGADPSLKDTEGRMAKDFDYQPPAEGE--------EGAEDASKMEL 761 +GH ++V +L+ K + +A DKD +KAGA++++QNSDGH+ALMFA+NG+ QV +L ++Y++Y+ D + + G + ++REA+ + ++++LL+ +GAD +LKD EG AKDFD+ P + + E D SK EL Sbjct: 315 EGHQEVVQLLVENKNIDVNAKDKDXXXXXXXXXXXXXXXXXXXXLKAGASVNEQNSDGHTALMFAFNGKNQVETLWERYSQYVKDDEKDKEDDGGTGPIIREALDNHTALVELLIKNGADETLKDKEGHTAKDFDFHPETDADVLKRETQAEKVRDESKNEL 476
BLAST of mRNA_L-elsbetiae_contig5605.13939.1 vs. uniprot
Match: W7T4W4_9STRA (Ankyrin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T4W4_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 4.340e-16 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 3 Query: 438 LVKAGAALDKQNSDGHSALMFAYNGRAQVASLMDKYAEYLDDADDASGESTKMMREAM-AHTQSIIDLLLTSGADPSLKDTEGRMAKDFDYQPPAEGEEGAEDAS 749 L+K GA ++ QNSDGH+AL FAYNG QVASL+DKY EY+ +D +TK+++EA+ HTQ ++DLL SGAD +LKD EG A DF Y+ + GE AE+A+ Sbjct: 759 LLKHGAEVNAQNSDGHTALFFAYNGLNQVASLLDKYGEYVQGEND---NNTKIIKEALETHTQ-VVDLLKLSGADENLKDKEGHTAADFGYKRVSSGE--AEEAA 857
BLAST of mRNA_L-elsbetiae_contig5605.13939.1 vs. uniprot
Match: A0A6U3Q8H2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Q8H2_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.360e-15 Identity = 56/152 (36.84%), Postives = 90/152 (59.21%), Query Frame = 3 Query: 312 QGHGDIVDMLL-ATKCNKDAADKDGTNALMAAASNGHLEAATSLVKAGAALDKQNSDGHSALMFAYNGRAQVASLMDKYAEYLDDA---DDASGESTK---------MMREAMAHTQSIIDLLLTSGADPSLKDTEGRMAKDFDYQPPAEGE 728 +GH ++V +L+ K + DA DKD TN+ + AGA +++QN DGH+ALMFAYNG+ QV +L ++Y +++++A GES + ++REA+ + ++++LLL +GAD LKD EG A DFD+ P A+ + Sbjct: 749 EGHVEVVKLLIDEAKADVDAKDKDETNSXXXXXXXXXXXXXXXXLAAGAKVNEQNVDGHTALMFAYNGKNQVETLWERYNQFVNEAKAEQTDKGESEEEIDDGGTGPIIREALDNHTALVELLLKNGADEKLKDKEGHTAADFDFHPDADAD 900
BLAST of mRNA_L-elsbetiae_contig5605.13939.1 vs. uniprot
Match: A0A7S2UKR6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKR6_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 1.180e-14 Identity = 51/120 (42.50%), Postives = 78/120 (65.00%), Query Frame = 3 Query: 441 VKAGAALDKQNSDGHSALMFAYNGRAQVASLMDKYAEYLDDADDAS-----GESTKMMREAMAHTQSIIDLLLTSGADPSLKDTEGRMAKDFDYQPPAEGE--------EGAEDASKMEL 761 +KAGA++++QN DGH+ALMFAYNG+ QV +L ++Y +++ D+ + G + +++EA+ + +++DLLL SGAD +LKD EG A DFD+ P A+ E E D SK EL Sbjct: 526 LKAGASVNEQNIDGHTALMFAYNGKNQVETLWERYHQFVRDSSASEEKVDDGGTGPIIQEALDNHTALVDLLLKSGADATLKDKEGHTAGDFDFNPDADAEVLDQEEKAEKKRDESKNEL 645
BLAST of mRNA_L-elsbetiae_contig5605.13939.1 vs. uniprot
Match: A0A1E7F291_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F291_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.040e-14 Identity = 47/112 (41.96%), Postives = 69/112 (61.61%), Query Frame = 3 Query: 477 DGHSALMFAYNGRAQVASLMDKYAEYLDDADDASGESTK---------MMREAMAHTQSIIDLLLTSGADPSLKDTEGRMAKDFDYQPPAEGE--------EGAEDASKMEL 761 DGH+ALMFAYNG+ QV +L ++Y +++D+A +GES + ++EA+ + +++DLL+ SGAD SLKD EG A DFD+ P + E E +D SK EL Sbjct: 2 DGHTALMFAYNGKNQVETLWERYNQFVDEAK-TNGESKEDVDDNDTGPTIQEALKNHTALVDLLIKSGADQSLKDKEGHAANDFDFHPDTDAEILAKEARAEKVKDESKNEL 112
BLAST of mRNA_L-elsbetiae_contig5605.13939.1 vs. uniprot
Match: A0A6H5KZC7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZC7_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 6.620e-14 Identity = 50/109 (45.87%), Postives = 73/109 (66.97%), Query Frame = 3 Query: 438 LVKAGAALDKQNSDGHSALMFAYNGRAQVASLMDKYAEYLDDADDASGESTKMMREAMAHTQSIIDLLLTSGADPSLKDTEGRMAKDFDYQPPA--EGEEGAEDASKME 758 L++ GA +D+QN DGH+ALMFAYNGR QVA+L+ +Y EY+ +D + K++++++ +II L +GADP L DT G A+DF+ Q PA E E GA A ++E Sbjct: 824 LLRHGANVDQQNLDGHTALMFAYNGRNQVAALLSRYLEYVGGKEDDG--NAKIIQDSLQVHTNIIAALQAAGADPGLLDTNGNSAQDFESQHPAGHETEGGASGAGRLE 930 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5605.13939.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5605.13939.1 >prot_L-elsbetiae_contig5605.13939.1 ID=prot_L-elsbetiae_contig5605.13939.1|Name=mRNA_L-elsbetiae_contig5605.13939.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=197bp MFLDGLHASSLDMVRRPTPVVTAFSSCVGFPTAAVHKLSSLRCVLIQGHGback to top mRNA from alignment at L-elsbetiae_contig5605:5548..10066+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5605.13939.1 ID=mRNA_L-elsbetiae_contig5605.13939.1|Name=mRNA_L-elsbetiae_contig5605.13939.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4519bp|location=Sequence derived from alignment at L-elsbetiae_contig5605:5548..10066+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5605:5548..10066+ >mRNA_L-elsbetiae_contig5605.13939.1 ID=mRNA_L-elsbetiae_contig5605.13939.1|Name=mRNA_L-elsbetiae_contig5605.13939.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1182bp|location=Sequence derived from alignment at L-elsbetiae_contig5605:5548..10066+ (Laminarionema elsbetiae ELsaHSoW15)back to top |