prot_L-elsbetiae_contig560.13924.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig560.13924.1
Unique Nameprot_L-elsbetiae_contig560.13924.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length635
Homology
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BLAST of mRNA_L-elsbetiae_contig560.13924.1 vs. uniprot
Match: D7FH20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH20_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 5.270e-13
Identity = 42/60 (70.00%), Postives = 48/60 (80.00%), Query Frame = 0 
Query:  348 ASGLCRASLTNLDEVAGRGQLCAIVWLSDRGAGASTLAVDRAASAGHADVVGYLLRNRQE 407
            ASG+CRASL NLDEVA  GQL A++WLS+RGA AST AVDRAA AGH   V YLL +R+E
Sbjct:  208 ASGICRASLANLDEVAREGQLRALIWLSERGARASTSAVDRAAEAGHLGTVEYLLHHRRE 267
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BLAST of mRNA_L-elsbetiae_contig560.13924.1 vs. uniprot
Match: A0A6H5JRB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB1_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.060e-11
Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 0 
Query:  346 LDASGLCRASLTNLDEVAGRGQLCAIVWLSDRGAGASTLAVDRAASAGHADVVGYLLRNRQE 407
            L  SG+CRASL NLDEVA  GQL A++WL++R A AST AVDRAA AGH   V YLL +R+E
Sbjct:  158 LHDSGICRASLANLDEVAREGQLRALIWLNERDARASTSAVDRAAEAGHLGTVEYLLHHRRE 219
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig560.13924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH20_ECTSI5.270e-1370.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRB1_9PHAE1.060e-1164.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 297..326
e-value: 420.0
score: 7.8
coord: 240..270
e-value: 890.0
score: 5.4
coord: 184..214
e-value: 2300.0
score: 2.2
coord: 381..413
e-value: 3800.0
score: 0.7
coord: 128..158
e-value: 230.0
score: 9.8
NoneNo IPR availablePFAMPF13637Ank_4coord: 132..176
e-value: 9.3E-5
score: 22.9
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 35..318
NoneNo IPR availablePANTHERPTHR46586FAMILY NOT NAMEDcoord: 297..468
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 297..468
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 35..318
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..601
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 629..634
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 602..628
NoneNo IPR availableTMHMMTMhelixcoord: 602..624
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 113..265
e-value: 2.0E-16
score: 62.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 269..362
e-value: 9.0E-13
score: 49.9
coord: 379..475
e-value: 2.0E-5
score: 25.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 133..458

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig560contigL-elsbetiae_contig560:5831..10254 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig560.13924.1mRNA_L-elsbetiae_contig560.13924.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig560 5508..11160 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig560.13924.1 ID=prot_L-elsbetiae_contig560.13924.1|Name=mRNA_L-elsbetiae_contig560.13924.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=635bp
MAALFSQVMEAPELVTACMAYQDGVQMAMYEDGDVAACSGHLSLLRLRRA
LRRKGKRSEGDVGSTSGAKPDASCSRSSSKASSTRSVEERISGNKEEEAG
GGKHVSMLAGEGQADSDEDVLQLEDLRFSHLAVDWAAAQGHLAVVRWLLE
NRSEGCTESAVDGACWNGHEGTVRWLMCEWRQAGSERALDYAASTGRLEL
TKWLSRQRGSRCTVAAMDGAAGGGYLEVVRWLAANRREGCSMSAFELASA
GGHLDVIKWLEKAGFLRCSSAGWDNAAEGGHLHVLKWLLEHLAEYKCSSN
SYGLAASRGHLDVCKWLCETMPDLRCPVWAAETAAAAGHFEVVRWLDASG
LCRASLTNLDEVAGRGQLCAIVWLSDRGAGASTLAVDRAASAGHADVVGY
LLRNRQEGCSPEALVGAAGRGHLAIVKLLRELRPEQCGCCLSARAVAAAA
GQSEVARWLDESDPELLRALEEAVVSDTSTEHRGDSSTSSSSGDEGSAHQ
AACDEESSFFSALGSSKNSSYSDGHPNDRAGDFETTFLSDLSSKNSEGRQ
GHVVGVGKAHEDTGEVHVGDQARRRDTDDEVGETTWMGPGEVLRQMGRPS
PILLIASMAAVFLLMVGMGWPPIFGMFFPSVSSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf