prot_L-elsbetiae_contig5598.13916.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5598.13916.1
Unique Nameprot_L-elsbetiae_contig5598.13916.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length153
Homology
BLAST of mRNA_L-elsbetiae_contig5598.13916.1 vs. uniprot
Match: D7G0N6_ECTSI (Ubiquitin-like protein ATG12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N6_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 1.560e-61
Identity = 114/161 (70.81%), Postives = 128/161 (79.50%), Query Frame = 0
Query:    1 MDLTDLTIQSGKIHLVREIVRDGITGSVRVLGSLKSYDAAANVAIVEYKGDQLNIDASLLTDFQFRVDSLYEFIGEIQATAGAA-FPCRPGLPHRGVGAIASGA------AAAVAVEETISAGIMEAS-GKQGGSGRGPPPATPEKVKVHFQPIANAPILR 153
            MDLTDLTIQ GKIHLVREI+RDG+TGSVRVLGSLKSYDAAA+VA+V+YKGDQL IDA LLTDFQFR+DSLYEFIGE+Q  AGAA    RPGLP  G GA+ S A      AA     E +S GIM+ S  ++G + R PPPATPEKVKVHF+PIANAPILR
Sbjct:    1 MDLTDLTIQPGKIHLVREILRDGVTGSVRVLGSLKSYDAAADVAVVDYKGDQLTIDACLLTDFQFRIDSLYEFIGEVQGAAGAARVSRRPGLPRWG-GALCSIARGLTAGAATTTAAERLSIGIMDVSVPERGETSRIPPPATPEKVKVHFKPIANAPILR 160          
BLAST of mRNA_L-elsbetiae_contig5598.13916.1 vs. uniprot
Match: A0A1S8W7W3_9FUNG (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W7W3_9FUNG)

HSP 1 Score: 57.8 bits (138), Expect = 3.790e-8
Identity = 25/50 (50.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:   28 VRVLGSLKSYDAAANVAIVEYKGDQLNIDASLLTDFQFRVDSLYEFIGEI 77
            VR+LG L+SY+   N+A VEY+G QL +D +LL  F ++++SLY++IGE+
Sbjct:    6 VRILGRLRSYNVHTNMAQVEYRGQQLLVDTALLGIFDYKINSLYQWIGEL 55          
BLAST of mRNA_L-elsbetiae_contig5598.13916.1 vs. uniprot
Match: A0A0L0H773_SPIPD (Uncharacterized protein (Fragment) n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H773_SPIPD)

HSP 1 Score: 58.2 bits (139), Expect = 6.510e-8
Identity = 35/87 (40.23%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    7 TIQSGKIHLVREIVRDGITGS-VRVLGSLKSYDAAANVAIVEYKGDQLNIDASLLTDFQFRVDSLYEFIGEI---QATAGAAFPCRP 89
            T + GKI  + EI    ++GS VRV+G+L +YD   ++A++E+   QL +D SLL  F  R  SL +FIGE+   Q      F C P
Sbjct:    6 TRRHGKIVHIEEIQAQSMSGSSVRVIGTLLTYDTNTSLAVIEHARSQLVVDLSLLGPFSNRTKSLLQFIGEVETWQPPPNLPFSCLP 92          
BLAST of mRNA_L-elsbetiae_contig5598.13916.1 vs. uniprot
Match: F4P7T1_BATDJ (Uncharacterized protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4P7T1_BATDJ)

HSP 1 Score: 54.3 bits (129), Expect = 2.360e-6
Identity = 25/56 (44.64%), Postives = 38/56 (67.86%), Query Frame = 0
Query:   27 SVRVLGSLKSYDAAANVAIVEYKGDQLNIDASLLTDFQFRVDSLYEFIGEIQATAG 82
            +VRVLG LK Y+   N+   EYKG  ++ID +LL  F +++ SLY++IGE+ +  G
Sbjct:   55 TVRVLGRLKDYNVHKNIVQAEYKGQCMSIDTTLLGIFDYKLGSLYQWIGELASFTG 110          
BLAST of mRNA_L-elsbetiae_contig5598.13916.1 vs. uniprot
Match: D8RL68_SELML (Uncharacterized protein (Fragment) n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RL68_SELML)

HSP 1 Score: 52.4 bits (124), Expect = 5.820e-6
Identity = 23/51 (45.10%), Postives = 37/51 (72.55%), Query Frame = 0
Query:   27 SVRVLGSLKSYDAAANVAIVEYKGDQLNIDASLLTDFQFRVDSLYEFIGEI 77
            S+RV+G+L+S+D  + VA + ++G +L +D +LL D   R  SLY+FIGE+
Sbjct:   24 SLRVMGTLESFDVESGVAHIRHEGAKLAVDTTLLRDIHLRPGSLYQFIGEL 74          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5598.13916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G0N6_ECTSI1.560e-6170.81Ubiquitin-like protein ATG12 n=1 Tax=Ectocarpus si... [more]
A0A1S8W7W3_9FUNG3.790e-850.00Uncharacterized protein n=1 Tax=Batrachochytrium s... [more]
A0A0L0H773_SPIPD6.510e-840.23Uncharacterized protein (Fragment) n=2 Tax=Spizell... [more]
F4P7T1_BATDJ2.360e-644.64Uncharacterized protein n=2 Tax=Batrachochytrium d... [more]
D8RL68_SELML5.820e-645.10Uncharacterized protein (Fragment) n=3 Tax=Selagin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029146CST complex subunit Ten1, animal and plant typePFAMPF15490Ten1_2coord: 8..80
e-value: 1.2E-14
score: 54.0
NoneNo IPR availableGENE3D2.40.50.140coord: 7..88
e-value: 4.1E-10
score: 41.1
NoneNo IPR availablePANTHERPTHR33905FAMILY NOT NAMEDcoord: 10..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5598contigL-elsbetiae_contig5598:1..2493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5598.13916.1mRNA_L-elsbetiae_contig5598.13916.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5598 1..2493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5598.13916.1 ID=prot_L-elsbetiae_contig5598.13916.1|Name=mRNA_L-elsbetiae_contig5598.13916.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp
MDLTDLTIQSGKIHLVREIVRDGITGSVRVLGSLKSYDAAANVAIVEYKG
DQLNIDASLLTDFQFRVDSLYEFIGEIQATAGAAFPCRPGLPHRGVGAIA
SGAAAAVAVEETISAGIMEASGKQGGSGRGPPPATPEKVKVHFQPIANAP
ILR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029146Ten1_animal_plant