prot_L-elsbetiae_contig5596.13914.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5596.13914.1
Unique Nameprot_L-elsbetiae_contig5596.13914.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length271
Homology
BLAST of mRNA_L-elsbetiae_contig5596.13914.1 vs. uniprot
Match: D7FNH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH0_ECTSI)

HSP 1 Score: 431 bits (1109), Expect = 6.390e-150
Identity = 212/231 (91.77%), Postives = 221/231 (95.67%), Query Frame = 0
Query:    1 MHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISLPASIISELIRKEAEIPWQFELKLVRRKAPGKFEPVDVPAPSREALTGKVEMPQLSAVACSVLDARSPEQFVFIPDWMMKALRLRPRDIVLYRHKDLTKASTIVLQPHSSAFIKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDTDGKSQETVCVQDSDVATDFKAALDTPEGRRKPRA 231
            MHKFDRRLERLAMVMPLTD FDPGVTHFAHEHLQEGDKIS+PASI+SEL+RK+AEIPWQFELKLVRRK PGKFEPVDVPAP R ALTG+ EMPQLSAVACS+LDARSPEQFVF+PDWMMKALRLRPRDIVLYRHKDLTKAS IVLQPHSSAF+KMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECID DGKSQE VCVQDSDVATDF+AALDTP GRRKP A
Sbjct:   73 MHKFDRRLERLAMVMPLTDQFDPGVTHFAHEHLQEGDKISMPASILSELMRKQAEIPWQFELKLVRRKGPGKFEPVDVPAPPRAALTGRAEMPQLSAVACSILDARSPEQFVFMPDWMMKALRLRPRDIVLYRHKDLTKASKIVLQPHSSAFLKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDADGKSQEAVCVQDSDVATDFQAALDTPAGRRKPGA 303          
BLAST of mRNA_L-elsbetiae_contig5596.13914.1 vs. uniprot
Match: A0A835Z4C9_9STRA (Ubiquitin fusion degradation protein UFD1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4C9_9STRA)

HSP 1 Score: 229 bits (584), Expect = 8.540e-70
Identity = 113/244 (46.31%), Postives = 164/244 (67.21%), Query Frame = 0
Query:    1 MHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISLPASIISELIRKEAEIPWQFELKLVRRKAPGKFEPVDVPAPSREALTGKVEMPQLSAVACSVLDARSPEQFVFIPDWMMKALRLRPRDIVLYRHKDLTKASTIV-LQPHSSAFIKMSNHQAVMETELRHYSAITRGTTVAFRYR----------------------KTLYKFNVLECIDTDGKSQETVCVQDSDVATDFKAALD 221
            M+K+DR+++RL +VMPLTD F+P V  F H HLQ  D++SLP S++ E+  ++ E PWQFE++ V R+ PG + PV++  P+R+ L G+ EMPQLS V CS LDAR+PEQ++FIPDWMMK+LRL+PRDIV  R+K+L +++  V LQ HS +    +   AV+E ELRHYS++T GTT++F +                       +   K NV++C+D  G++ E+VC+QD+DV TD+   LD
Sbjct:  110 MNKYDRKMDRLLLVMPLTDSFEPAVGQFGHGHLQTSDRVSLPQSVLKEVQHRKLEFPWQFEIQRVHRRGPGDYLPVELSMPTRDDLAGRTEMPQLSRVTCSPLDARAPEQYIFIPDWMMKSLRLKPRDIVQLRYKNLPQSTGCVHLQAHSES---AATSHAVLEEELRHYSSLTAGTTISFVFNPQGAELGGAKGAKGKAKKGVGARREVKINVVQCVDAGGRAVESVCIQDADVGTDWLKPLD 350          
BLAST of mRNA_L-elsbetiae_contig5596.13914.1 vs. uniprot
Match: A0A7S2UZC1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZC1_9STRA)

HSP 1 Score: 204 bits (519), Expect = 5.120e-61
Identity = 108/242 (44.63%), Postives = 156/242 (64.46%), Query Frame = 0
Query:    1 MHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISLPASIISELIRKEAEIPWQFELKLVRRKAP-GKFEPVD-------------VPAPSREALTGKVEMPQLSAVACSVLDARSPEQFVFIPDWMMKALRLRPRDIVLYRHKDLTKASTIVLQPHSSAFIKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDTDGKSQETVCVQDSDVATDFKAALDTPEGRRK 228
            M K DR L+R  +VMPLT  FDP V + AH H+Q GDKIS+P S+   ++++  E PWQFE++++ R     + +P D                      T K++ P L  + CS+LD R+PE ++F+P WMMK+L LRPRD+V  RH  L + +   LQPH S F+K++NH+AV+E+ELRHYS++T G+T+AFRYRK  Y F+V+E + +DGK Q+ +CVQD +VA DF   LD  + ++K
Sbjct:   64 MKKLDRSLDRRYIVMPLTRAFDPPVGNIAHNHIQFGDKISMPKSLFKMIMKQHIEPPWQFEIEVINRVGDCEEKDPEDGDXXXXXXXXXXXXXXXXXXLSTSKLQWP-LKKLYCSLLDIRAPENYIFLPGWMMKSLGLRPRDVVRMRHFVLPQGTMAKLQPHHSDFLKLTNHRAVLESELRHYSSLTTGSTIAFRYRKKKYFFDVVEVM-SDGKIQDAICVQDCNVAADFVEPLDVVKKKKK 303          
BLAST of mRNA_L-elsbetiae_contig5596.13914.1 vs. uniprot
Match: A0A6V1UP89_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UP89_HETAK)

HSP 1 Score: 175 bits (444), Expect = 1.680e-49
Identity = 99/256 (38.67%), Postives = 142/256 (55.47%), Query Frame = 0
Query:    1 MHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISLPASIISELIRKEAEIPWQFELKLVRRKAPGKFEPVD----------------------------------VPAPSREALTGKVEMPQLSAVACSVLDARSPEQFVFIPDWMMKALRLRPRDIVLYRHKDLTKASTIVLQPHSSAFIKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDTDGKSQETVCVQDSDVATDFKAALDT 222
            + K D  L R  ++MP+ + FDP    F+  H+Q GDK+S+P SI S + R++   PW FE++++   +P + + +                                       S     G  +  +L  V  S+LD  +PE ++F PDWM+KALRLRPRD+V  R   L K   I L+PHSS F+K+SNHQAVMETEL+HYS +T G TV  +YR T+Y+ +V E + +DGK    +C++D+DVATDF   LDT
Sbjct:   44 LSKLDNNLNRRCIIMPMNEGFDPPPGSFSRGHIQMGDKMSIPRSIFSHIQREDIGYPWLFEIEVLH--SPEEQDELKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGPKRGGARKKKELQRVYGSILDYAAPENYIFAPDWMLKALRLRPRDVVEVRLAALPKGGLIKLRPHSSDFLKLSNHQAVMETELKHYSCLTEGATVKIKYRDTVYELDVEELL-SDGKPVGALCIEDTDVATDFLPPLDT 296          
BLAST of mRNA_L-elsbetiae_contig5596.13914.1 vs. uniprot
Match: A0A0G4FQT5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FQT5_VITBC)

HSP 1 Score: 176 bits (446), Expect = 2.890e-49
Identity = 94/238 (39.50%), Postives = 141/238 (59.24%), Query Frame = 0
Query:    1 MHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISLPASIISELIRKEAEIPWQFELKLVRRKAPGKFEPVDVPAPSR---------------EALTGKVEMPQ--LSAVACSVLDARSPEQFVFIPDWMMKALRLRPRDIVLYRHKDLTKASTIVLQPHSSAFIKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDTDGKSQETVCVQDSDVATDFKAALD 221
            + K + R  R   VMP+++ F+P   HF+H+H+  GDK+S P +I ++L+ +  EIPWQF L+ + RK   K         +                + + G+    +  L  V CS LD R+PE FVF+PDWMM AL L PRD++      L + +T+  QPH+SAF+KMSNHQAV+E ELRHYS++T G+T+  +Y +  +  +V+E + +  ++ + VCVQD DV+TDF A  D
Sbjct:  107 LEKAEGRHGRFLTVMPISEKFNPPPGHFSHDHVMYGDKVSFPRTISTQLLERNLEIPWQFVLEKIDRKELEKVWGGTATTTTXXXXXXXXXXXXXXXGDRIGGRQRYYKSGLKRVYCSTLDFRAPENFVFVPDWMMAALNLMPRDLLYCEFVRLPEGTTVTFQPHNSAFLKMSNHQAVLERELRHYSSLTAGSTIVIKYNRRNFLIDVVE-VKSGSEAYDGVCVQDCDVSTDFIAPKD 343          
BLAST of mRNA_L-elsbetiae_contig5596.13914.1 vs. uniprot
Match: A0A7S3Q209_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q209_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.630e-43
Identity = 91/221 (41.18%), Postives = 128/221 (57.92%), Query Frame = 0
Query:   10 RLAMVMPLTDHFDPGVTHFAHEHLQEGDKISLPASIISELIRKEAEIPWQFELKLVRRKAPGKFEPVDVPAPSREALTGKVEMPQLSAVACSVLDARSPEQFVFIPDWMMKALRLRPRDIVLYRHKDLTKA-STIVLQPHSSAFIKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDTD-GKSQETVCVQDSDVATDFKAALDTPEGRRK 228
            R  +V+PL D FDP V  F+H H Q GDK+SLP    S + +  A++PW FE+  V           D     R  L   +E P+LS V    +D RSP+ +VF+P WMM+AL L+PRD+V  +      A S + L+PH+S F+ + NHQAV+ETEL+HYSA+TRG+T+ F Y    Y F+V++   +  G+      VQD D+A +F  A D  +  RK
Sbjct:   88 RRLIVLPLDDRFDPPVGVFSHGHTQTGDKMSLPRVFWSAIQKTNADVPWLFEVSRV-----------DGVTGPRVILPPNMEDPKLSKVVGGAIDFRSPDNYVFLPRWMMQALALKPRDVVDVKLIQTVPAGSAVKLRPHASEFVNIGNHQAVLETELKHYSALTRGSTIPFDYLGKRYYFDVVDLRSSPRGEKVPMAKVQDCDIAAEFIRAKDQMKKNRK 297          
BLAST of mRNA_L-elsbetiae_contig5596.13914.1 vs. uniprot
Match: B7GA75_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GA75_PHATC)

HSP 1 Score: 155 bits (393), Expect = 4.050e-42
Identity = 91/222 (40.99%), Postives = 133/222 (59.91%), Query Frame = 0
Query:   10 RLAMVMPLTDHFDPGVTHFAHEHLQEGDKISLPASIISELIRKEAEIPWQFELKLVRRKAPGKFEPVDVPAPSREALTGKVEMPQLSAVACSVLDARSPEQFVFIPDWMMKALRLRPRDIVLYRHKDLTKASTIV-LQPHSSAFIK-MSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDTD-GKSQETVCVQDSDVATDFKAALDTPEGRRK 228
            R  + +PL+D FDP +  F+H+H+Q GDK+SLPA+    +    AE+PW F +K +      + E  D      + +T    + QL  V    LD R+P  ++F+P WMM+AL ++PRDIV     +   A ++  L+PHSS F K ++N QAV+ETELRHYS++T+G+T+AF Y K  Y F+V+E      G+    V VQD D+ATDF  A D  + RR+
Sbjct:   94 RRLICLPLSDRFDPPMGSFSHKHVQTGDKMSLPANFWQAIQLNHAEVPWLFSVKRIDGVTGERVEFSD-----DDIITPHKPLAQLDKVVGGPLDFRAPACYIFLPWWMMRALGVKPRDIVEVELFETVPAGSLAKLRPHSSDFGKEIANPQAVLETELRHYSSLTQGSTIAFDYNKKRYWFDVVELRSAPRGEKSSMVKVQDCDIATDFLIARDEIQNRRR 310          
BLAST of mRNA_L-elsbetiae_contig5596.13914.1 vs. uniprot
Match: A0A7S2EXW9_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EXW9_TRICV)

HSP 1 Score: 154 bits (389), Expect = 7.690e-42
Identity = 90/214 (42.06%), Postives = 126/214 (58.88%), Query Frame = 0
Query:   10 RLAMVMPLTDHFDPGVTHFAHEHLQEGDKISLPASIISELIRKEAEIPWQFELKLVRRKAPGKFEPVDVPAPSREALTGKVEMPQLSAVACSVLDARSPEQFVFIPDWMMKALRLRPRDIVLYRHKD-LTKASTIVLQPHSSAFIKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDTD-GKSQETVCVQDSDVATDFKAALD 221
            R  +V+PL + FDP    F+H H+Q GDK+SLP +  + + + +AE+PW FE+  V     G   P  V  P+R A     E P L  V    +D RSP  +VF+P WMM AL L+PRD+V  R  + +   S + L+PHSS F+K+ NHQAV+ETEL+HYSA+T+G T+ F Y    Y F+V++      G+      VQD D+A +F  A D
Sbjct:   79 RRLIVLPLDERFDPPTGVFSHGHVQTGDKMSLPKNFWAAIAKTKAEVPWLFEVSRVD----GATGPRAV-MPARGA-----EDPGLDKVVGGAIDFRSPSNYVFLPRWMMIALALKPRDVVDVRLVETVPPGSAVKLRPHSSEFVKIGNHQAVLETELKHYSALTKGATIPFDYNNKRYYFDVVDLRSAPRGEKVPMAKVQDCDIAAEFVRAKD 282          
BLAST of mRNA_L-elsbetiae_contig5596.13914.1 vs. uniprot
Match: A0A6U3VNR1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3VNR1_9STRA)

HSP 1 Score: 152 bits (385), Expect = 5.110e-41
Identity = 90/222 (40.54%), Postives = 126/222 (56.76%), Query Frame = 0
Query:   10 RLAMVMPLTDHFDPGVTHFAHEHLQEGDKISLPASIISELIRKEAEIPWQFELKLVRRKAPGKFEP-VDVPAPSREALTGKVEMPQLSAVACSVLDARSPEQFVFIPDWMMKALRLRPRDIVLYRH-KDLTKASTIVLQPHSSAFIKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDTD-GKSQETVCVQDSDVATDFKAALDTPEGRRK 228
            R A+ +PL D FDP V  F+H H+  GDK+SLP +    +++ +AE+PW FE+  V     G   P V +PA      +       LS      LD RSP  +VF+P WM KAL LRPRD+V  R  K     S + L+PH+SAF  + NHQAV+ETEL+HYSA+T G+T+ F YR   + F+V++      G+      VQD D+A +F    D  + +R+
Sbjct:   97 RRAIALPLDDRFDPPVGVFSHGHIYTGDKMSLPRNFWDAIMKSKAEVPWLFEVSRVD----GVSSPRVTMPADEHHHKSSAT----LSRAVGGALDFRSPNNYVFLPPWMFKALGLRPRDVVDVRLVKTTPPGSAVKLRPHTSAFTNIGNHQAVLETELKHYSALTLGSTIPFDYRGERFYFDVVDLRSAPRGERVPMAKVQDCDIAAEFVRPKDQMKPKRR 310          
BLAST of mRNA_L-elsbetiae_contig5596.13914.1 vs. uniprot
Match: B8C193_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C193_THAPS)

HSP 1 Score: 152 bits (385), Expect = 6.350e-41
Identity = 89/222 (40.09%), Postives = 126/222 (56.76%), Query Frame = 0
Query:   10 RLAMVMPLTDHFDPGVTHFAHEHLQEGDKISLPASIISELIRKEAEIPWQFELKLVRRKAPGKFEP-VDVPAPSREALTGKVEMPQLSAVACSVLDARSPEQFVFIPDWMMKALRLRPRDIVLYRHKDLTK-ASTIVLQPHSSAFIKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDTD-GKSQETVCVQDSDVATDFKAALDTPEGRRK 228
            R  +V+PL D FDP V  F+H H+  GDK+SLP +    +   +AE+PW FE+  V     G   P V++PA      T       LS      LD RSP+ + F+P WM KAL LRPRD+V  +    T   S + L+PH+S+F+ + NHQAV+ETEL+HYSA+T G+T+ F YR   Y F+V++      G+      VQD D+A +F    D  + ++K
Sbjct:  104 RRVIVLPLDDRFDPPVGVFSHGHIYTGDKMSLPRNFWDAITSSKAEVPWLFEVSRVD----GVTAPRVELPADEHHHATSAT----LSRAVGGALDFRSPDNYAFLPPWMFKALGLRPRDVVDIKLTTTTPPGSAVRLRPHTSSFVNIGNHQAVLETELKHYSALTLGSTIPFDYRGERYYFDVVDLRSAPRGERVPMAKVQDCDIAAEFVRPKDQLKPKKK 317          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5596.13914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNH0_ECTSI6.390e-15091.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z4C9_9STRA8.540e-7046.31Ubiquitin fusion degradation protein UFD1-domain-c... [more]
A0A7S2UZC1_9STRA5.120e-6144.63Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1UP89_HETAK1.680e-4938.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0G4FQT5_VITBC2.890e-4939.50Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S3Q209_9STRA1.630e-4341.18Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
B7GA75_PHATC4.050e-4240.99Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2EXW9_TRICV7.690e-4242.06Hypothetical protein n=2 Tax=Trieres chinensis Tax... [more]
A0A6U3VNR1_9STRA5.110e-4140.54Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8C193_THAPS6.350e-4140.09Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004854Ubiquitin fusion degradation protein Ufd1-likePFAMPF03152UFD1coord: 29..217
e-value: 2.1E-36
score: 125.0
IPR004854Ubiquitin fusion degradation protein Ufd1-likePANTHERPTHR12555UBIQUITIN FUSION DEGRADATON PROTEIN 1coord: 27..251
NoneNo IPR availableGENE3D3.10.330.10coord: 140..218
e-value: 1.7E-22
score: 81.1
NoneNo IPR availablePANTHERPTHR12555:SF13UBIQUITIN RECOGNITION FACTOR IN ER-ASSOCIATED DEGRADATION PROTEIN 1coord: 27..251
IPR042299Ufd1-like, Nn domainGENE3D2.40.40.50coord: 17..138
e-value: 4.7E-12
score: 47.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5596contigL-elsbetiae_contig5596:3334..7743 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5596.13914.1mRNA_L-elsbetiae_contig5596.13914.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5596 2515..8358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5596.13914.1 ID=prot_L-elsbetiae_contig5596.13914.1|Name=mRNA_L-elsbetiae_contig5596.13914.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=271bp
MHKFDRRLERLAMVMPLTDHFDPGVTHFAHEHLQEGDKISLPASIISELI
RKEAEIPWQFELKLVRRKAPGKFEPVDVPAPSREALTGKVEMPQLSAVAC
SVLDARSPEQFVFIPDWMMKALRLRPRDIVLYRHKDLTKASTIVLQPHSS
AFIKMSNHQAVMETELRHYSAITRGTTVAFRYRKTLYKFNVLECIDTDGK
SQETVCVQDSDVATDFKAALDTPEGRRKPRAAASSPTSTKKAPPSKEEDE
ESGSDSEEEEEGGGWGSDEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004854Ufd1-like
IPR042299Ufd1-like_Nn