prot_L-elsbetiae_contig5594.13912.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5594.13912.1
Unique Nameprot_L-elsbetiae_contig5594.13912.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length368
Homology
BLAST of mRNA_L-elsbetiae_contig5594.13912.1 vs. uniprot
Match: A0A6H5KRL3_9PHAE (TPR_MLP1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRL3_9PHAE)

HSP 1 Score: 380 bits (977), Expect = 4.600e-116
Identity = 262/382 (68.59%), Postives = 293/382 (76.70%), Query Frame = 0
Query:    1 QLQRTAARASEERYRKELEAHAGAITALRHAEDAQDVSTHIVYP--HXXXXXXXXXXXRPA------------CEDTEARLSSLRSQHEILTALFQKQTDDIQAAQAKRAAADKAVADRVAGEAGGDAAAADGQTDAKREEKEERMRLARAVKELTELVRHKGRDVQMVTTDLELSKQTVIKVEXXXXXXXXXXXXXXXXXXXAARDNVEAVSKAEHRKLLSEVAQVSTLKESNEMLRSKLGDAERRSRSAEESLKRLRVQVAPLQQAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKEHEEVIAEKERLGKLLSDALQEKAALEAGKAELSRGKAESEKERDDAVAMKTKLIPQVHELRKSLSALNVQK 368
            ++QRTAARA+EERYR+ELEAHAGAITALRHAEDAQD S        H             A            CEDT+ RL+SL SQHEILT   Q  T+ ++AAQAKRA  DKAVADRV  E  G                 E+MRLARAVKELTELVRHKGRDVQ+VTTDLELSKQ V KVE XXXXXXXXXXXXXXXXX AA ++VEAV+KAEHRKLL EVAQ+STL+ESN+MLRSKLGDAERRSR+AE SL +LR Q+APLQ+AQRQQSASSASLASEKESLRKEVE+WKKRVT+LTASFNAVDPK+HE+VIAEKERL K L++A Q KAALE     L+RGKA +EKERDDA A+K KL+PQVHELRKSLSA   QK
Sbjct:  602 EVQRTAARAAEERYRQELEAHAGAITALRHAEDAQDASNKAARDAQHAKDSLAADLIGARARWEAREAALNKTCEDTKERLASLNSQHEILTKHLQNLTEQMEAAQAKRAREDKAVADRVVEEGEGGGXXXXXXXXXXXXXXXEKMRLARAVKELTELVRHKGRDVQVVTTDLELSKQRVTKVEAXXXXXXXXXXXXXXXXXRAATESVEAVTKAEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQMAPLQRAQRQQSASSASLASEKESLRKEVESWKKRVTNLTASFNAVDPKDHEDVIAEKERLAKALAEAEQAKAALENAXXXLTRGKAAAEKERDDANAIKAKLLPQVHELRKSLSASAAQK 983          
BLAST of mRNA_L-elsbetiae_contig5594.13912.1 vs. uniprot
Match: D7FMD2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD2_ECTSI)

HSP 1 Score: 317 bits (813), Expect = 5.470e-101
Identity = 216/281 (76.87%), Postives = 239/281 (85.05%), Query Frame = 0
Query:   88 IQAAQAKRAAADKAVADRVAGEAGGDAAAADGQTDAKREEKEERMRLARAVKELTELVRHKGRDVQMVTTDLELSKQTVIKVEXXXXXXXXXXXXXXXXXXXAARDNVEAVSKAEHRKLLSEVAQVSTLKESNEMLRSKLGDAERRSRSAEESLKRLRVQVAPLQQAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKEHEEVIAEKERLGKLLSDALQEKAALEAGKAELSRGKAESEKERDDAVAMKTKLIPQVHELRKSLSALNVQK 368
            ++ AQAKRA  DKAVADRV  E  G            R   EE+MRLARAVKELTELVRHKGRDVQ+VTTDLELSKQ V KVE XXXXXXXXXXXXXXXXXXAA ++VEAVSKAEHRKLL EVAQ+STL+ESN+MLRSKLGDAERRSR+AE SL +LR Q+APLQ+AQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPK+HE+VIAEKERL K L++A Q KAALE  KA+L+RGKA +EKERDDA A+K K++PQVHELRKSLSA   QK
Sbjct:    1 METAQAKRAREDKAVADRVVEEGEGXXXXXXXXXXXXRXXXEEKMRLARAVKELTELVRHKGRDVQVVTTDLELSKQRVTKVEAXXXXXXXXXXXXXXXXXXAATESVEAVSKAEHRKLLEEVAQISTLRESNDMLRSKLGDAERRSRTAEGSLSQLRAQMAPLQRAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKDHEDVIAEKERLAKALAEADQTKAALENAKADLTRGKAAAEKERDDANAIKAKVLPQVHELRKSLSASAAQK 281          
BLAST of mRNA_L-elsbetiae_contig5594.13912.1 vs. uniprot
Match: A0A7S1YNQ1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YNQ1_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.120e-6
Identity = 46/158 (29.11%), Postives = 82/158 (51.90%), Query Frame = 0
Query:  205 KLLSEVAQVSTLKESNEMLRSKLGDAERRSRSAEESLKRLRVQVAPLQQAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKEHEEVIAE-------------------------KERLGKLLSDALQEKAALEAGKAELSRGKAESE 337
            KL    AQ++ + ESN++LR + G  ++     E  L   +  +AP  +         AS+ +EK+SL +E+E+WK+RV SL A FN VDP++H++ +A+                         K+++ KL  D    ++ +E  KA+L++ +A+S+
Sbjct: 1185 KLKEAEAQLNVVSESNQLLRVEAGQLKKTVSQLETKLAEAKGAIAPKDKLALHLEGKVASMQAEKDSLSRELESWKRRVESLVAKFNHVDPEDHKKALADAQSMKKERDVAKAEKATAHRTNVALKQQIAKLNKDVSTNQSLIEKQKAQLAKARADSD 1342          
BLAST of mRNA_L-elsbetiae_contig5594.13912.1 vs. uniprot
Match: D7FMD3_ECTSI (TPR_MLP1_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD3_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 2.660e-6
Identity = 32/38 (84.21%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    1 QLQRTAARASEERYRKELEAHAGAITALRHAEDAQDVS 38
            ++QRTAARA+EERYR+ELEAHAGAITALR AEDAQD S
Sbjct:  252 EVQRTAARAAEERYRQELEAHAGAITALRQAEDAQDGS 289          
BLAST of mRNA_L-elsbetiae_contig5594.13912.1 vs. uniprot
Match: A0A448ZKX7_9STRA (TPR_MLP1_2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKX7_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.400e-5
Identity = 54/199 (27.14%), Postives = 94/199 (47.24%), Query Frame = 0
Query:  129 EERMRLARAVKELTELVRHKGRDVQMVTTDLELSKQTVIKVEXXXXXXXXXXXXXXXXXXXAARDNVE----AVSKAEHRKLLSEVAQVSTLKESNEMLRSKLGDAERRSRSAEESLKRLRVQVAPLQQAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKEHEEVIAEKERLGKLLSDALQEKAALE 323
            EE  RL   V EL ELV+    +   +   L+ +K++  + E                     R+++E      +     KL +   Q   L +SN  L+ ++ D E     A++ ++  +  + P    Q+Q  +  A L +EK+SL +E+++WK RV SL + FN VDP+EH +V+ + E L K +    ++K+  E
Sbjct: 1194 EEMFRLRMTVSELRELVKFVRAEKDSIQLQLDSAKRSTER-ERTKAAVARRTVEETQAELDVLRESLENKXNGATDEGADKLKTAEEQSRLLSDSNAHLQRQVQDLEANLAXAKQEVEESKKALQPSADKQKQLESDKAVLLAEKDSLLREIDDWKGRVQSLVSKFNQVDPEEHLKVVKKSEELEKQVKSLEEKKSYAE 1391          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5594.13912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KRL3_9PHAE4.600e-11668.59TPR_MLP1_2 domain-containing protein n=1 Tax=Ectoc... [more]
D7FMD2_ECTSI5.470e-10176.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1YNQ1_9STRA1.120e-629.11Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
D7FMD3_ECTSI2.660e-684.21TPR_MLP1_2 domain-containing protein n=1 Tax=Ectoc... [more]
A0A448ZKX7_9STRA4.400e-527.14TPR_MLP1_2 domain-containing protein n=1 Tax=Pseud... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 166..200
NoneNo IPR availableCOILSCoilCoilcoord: 213..247
NoneNo IPR availableCOILSCoilCoilcoord: 262..289
NoneNo IPR availableCOILSCoilCoilcoord: 124..144
NoneNo IPR availablePANTHERPTHR18898NUCLEOPROTEIN TPR-RELATEDcoord: 62..351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5594contigL-elsbetiae_contig5594:483..12211 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5594.13912.1mRNA_L-elsbetiae_contig5594.13912.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5594 483..12211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5594.13912.1 ID=prot_L-elsbetiae_contig5594.13912.1|Name=mRNA_L-elsbetiae_contig5594.13912.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=368bp
QLQRTAARASEERYRKELEAHAGAITALRHAEDAQDVSTHIVYPHHHHRR
PPPPPPRPACEDTEARLSSLRSQHEILTALFQKQTDDIQAAQAKRAAADK
AVADRVAGEAGGDAAAADGQTDAKREEKEERMRLARAVKELTELVRHKGR
DVQMVTTDLELSKQTVIKVEAELERTKQSLREAREEVQRAARDNVEAVSK
AEHRKLLSEVAQVSTLKESNEMLRSKLGDAERRSRSAEESLKRLRVQVAP
LQQAQRQQSASSASLASEKESLRKEVENWKKRVTSLTASFNAVDPKEHEE
VIAEKERLGKLLSDALQEKAALEAGKAELSRGKAESEKERDDAVAMKTKL
IPQVHELRKSLSALNVQK
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