prot_L-elsbetiae_contig559.13908.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig559.13908.1
Unique Nameprot_L-elsbetiae_contig559.13908.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length332
Homology
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BLAST of mRNA_L-elsbetiae_contig559.13908.1 vs. uniprot
Match: D8LI43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI43_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 1.640e-109
Identity = 184/309 (59.55%), Postives = 209/309 (67.64%), Query Frame = 0 
Query:   29 MRSLPPNVIEHILQWLDLASHLRLREASRFDRDETPRRTTTLAARDCEQARRCQEKIFTPDKNTRLNRVTLDIAAPNSGRSSHSXXXXXXXXXXXXXXXXXXXXXXXXXXFLDDASRAARRAALPRLVREHRPAELWFKNMVRGGEFSDALLSLEENLDQVRKDTRVLHFGLATGGPRPYQDPRAHHWCLLRLRRLLGPAPSSGGGAAEGGKDN----AVKTELADLTKDILGAAAATTIMPHLVGRDARDEEAGEDEDGGGPGVRRVARS--ALPGAGKAYWPRLGELRLSCGIMAGDLEGLAECFGR 331
            MRSL PNV+EHILQWLDLASHLRLREAS FDRDETPRRTTTLAAR  EQARRCQ  IFTPDK TRL+ +TLD+ AP+SG SS                            FLD+AS A RR +LP L+REHRPAE+ FKNMVRG EFS+AL SLE N+DQVR+   VL FGL  GGPRPYQDPR+HHWC+LRLRRLLGPAP +  G A GG ++    AV TELA LT +++GAA A  ++PHL+      EE G  +       R  A +  A  G  KAYWP L EL LSCGIM GDLE LA C GR
Sbjct:    1 MRSLSPNVVEHILQWLDLASHLRLREASTFDRDETPRRTTTLAARGSEQARRCQLVIFTPDKKTRLHSITLDVTAPSSGSSSSKCGMEPTQHLSSFNSSFSS--------FLDEASCAKRRNSLPLLIREHRPAEIRFKNMVRGREFSEALRSLELNIDQVRESLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPAPLAAVGGAGGGSEDEGEGAVNTELAQLTVELIGAANAAMLVPHLI-HGLTGEEQGAGDTPSAEEFRPAAATLGAQVGGLKAYWPCLRELMLSCGIMRGDLEDLAGCLGR 300
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BLAST of mRNA_L-elsbetiae_contig559.13908.1 vs. uniprot
Match: A0A6H5KRS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS6_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 3.640e-59
Identity = 117/202 (57.92%), Postives = 135/202 (66.83%), Query Frame = 0 
Query:  139 FLDDASRAARRAALPRLVREHRPAELWFKNMVRGGEFSDALLSLEENLDQVRKDTRVLHFGLATGGPRPYQDPRAHHWCLLRLRRLLGPAP----SSGGGAAEGGKDNAVKTELADLTKDILGAAAATTIMPHLV-GRDARDEEAGEDEDGGGPGVRRVARSALP-GAG----KAYWPRLGELRLSCGIMAGDLEGLAECFG 330
            FLD+AS   R  +LP LVREHRPAE+ FKNMVRGGEFSDAL SLE N+DQVRK   VL FGL  GGPRPYQDPR+HHWC+LRLRRLLGP P       GG +E  ++ AV TELA LT +++G A A T++P L+ G    +E AGE      P    V  +A   GA     KAYWP L EL LSCGIM GDLE L+ C G
Sbjct:   17 FLDEASCITRHNSLPLLVREHRPAEIRFKNMVRGGEFSDALRSLELNIDQVRKSLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPGPLAEVGDAGGGSEDEEEGAVDTELAQLTVELMGPANAATLVPQLIHGLTGEEEGAGET-----PSAEEVRPAAAKLGAKVRGLKAYWPCLRELTLSCGIMRGDLEDLSACLG 213
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig559.13908.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI43_ECTSI1.640e-10959.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRS6_9PHAE3.640e-5957.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 31..57
e-value: 2.5E-4
score: 20.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig559contigL-elsbetiae_contig559:25899..28064 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig559.13908.1mRNA_L-elsbetiae_contig559.13908.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig559 25899..28064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig559.13908.1 ID=prot_L-elsbetiae_contig559.13908.1|Name=mRNA_L-elsbetiae_contig559.13908.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=332bp
RHTAYSKSPRHPQRECAETRGRFSCRGIMRSLPPNVIEHILQWLDLASHL
RLREASRFDRDETPRRTTTLAARDCEQARRCQEKIFTPDKNTRLNRVTLD
IAAPNSGRSSHSSSSGSSSGSSPPPTHHLSSHNSSMSSFLDDASRAARRA
ALPRLVREHRPAELWFKNMVRGGEFSDALLSLEENLDQVRKDTRVLHFGL
ATGGPRPYQDPRAHHWCLLRLRRLLGPAPSSGGGAAEGGKDNAVKTELAD
LTKDILGAAAATTIMPHLVGRDARDEEAGEDEDGGGPGVRRVARSALPGA
GKAYWPRLGELRLSCGIMAGDLEGLAECFGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom