prot_L-elsbetiae_contig5587.13905.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5587.13905.1
Unique Nameprot_L-elsbetiae_contig5587.13905.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length604
Homology
BLAST of mRNA_L-elsbetiae_contig5587.13905.1 vs. uniprot
Match: B7G4Y3_PHATC (Clathrin heavy chain n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4Y3_PHATC)

HSP 1 Score: 126 bits (317), Expect = 1.630e-26
Identity = 69/188 (36.70%), Postives = 112/188 (59.57%), Query Frame = 0
Query:   19 LAHAYSREIGSERLLELFEASKAFDVMFLYLESIVDGSSEPRIHHAFIKAALKTNRWEEAERICRDSTIYDVAEVEEMFVKAKLPSLRAAVHVWNKQGKSVEAITEYLFRTRRYKYLQTYVGEIAPENAPRVLGTLLDLKSRNKVFFRVLNAVGVNSSARHVEEQLRSRGYDSRRIQLWREGLEANGS 206
            +A  Y  E+GSE+L+++FE+++A + ++ YL +IV+ S +P +H  +I+A+    +++EAER+CRDST+Y   EV+E    AKLP  R  +HV ++ G  V+ +TEYL+     +Y++ YV +++P   P V+G L DL +      R+L AVG       + E   +R    R +Q W E   A GS
Sbjct:  672 VAKKYHEELGSEQLVQVFESNRATEGLYYYLGAIVNSSEDPFVHFKYIQASCMLGQFKEAERVCRDSTVYIAEEVKEYLKGAKLPDPRPLIHVCDRHG-FVDELTEYLYLNSLLQYIEVYVTKVSPTKTPMVVGKLFDLGANEDFIKRLLMAVGTACPVDELVEIAETRNR-LRLLQPWLEARVATGS 857          
BLAST of mRNA_L-elsbetiae_contig5587.13905.1 vs. uniprot
Match: A0A7S2MCC1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MCC1_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.850e-25
Identity = 67/199 (33.67%), Postives = 117/199 (58.79%), Query Frame = 0
Query:    8 KAKTSTETILVLAHAYSREIGSERLLELFEASKAFDVMFLYLESIVDGSSEPRIHHAFIKAALKTNRWEEAERICRDSTIYDVAEVEEMFVKAKLPSLRAAVHVWNKQGKSVEAITEYLFRTRRYKYLQTYVGEIAPENAPRVLGTLLDLKSRNKVFFRVLNAVGVNSSARHVEEQLRSRGYDSRRIQLWREGLEANGS 206
            +  T+ +  + +A  Y  E+GSE+L+E+FE+++A + ++ YL +IV+ S +  +H  +I+A+ +  +++EAER+CRDS IY+  EV++    AKLP  R  +HV ++    V+ +T+YL+     +Y++ YV +++P   P+V+G L DL +      R+L AVG       + E   +R    R +Q W E   A GS
Sbjct:  178 RGPTNMQVCVEVAKKYHEELGSEQLIEVFESNRAMEGLYYYLGAIVNFSEDSFVHFKYIQASCQLGQFKEAERVCRDSNIYNPEEVKDYLKNAKLPDPRPLIHVCDRFD-FVDELTDYLYLNSLLQYIEVYVTKVSPTKTPQVVGKLFDLGANEDFIKRILMAVGTACPVDEMVEIAETRNR-LRLLQPWLEARVATGS 374          
BLAST of mRNA_L-elsbetiae_contig5587.13905.1 vs. uniprot
Match: B8C8U9_THAPS (Clathrin heavy chain n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8U9_THAPS)

HSP 1 Score: 122 bits (306), Expect = 3.750e-25
Identity = 68/199 (34.17%), Postives = 115/199 (57.79%), Query Frame = 0
Query:    8 KAKTSTETILVLAHAYSREIGSERLLELFEASKAFDVMFLYLESIVDGSSEPRIHHAFIKAALKTNRWEEAERICRDSTIYDVAEVEEMFVKAKLPSLRAAVHVWNKQGKSVEAITEYLFRTRRYKYLQTYVGEIAPENAPRVLGTLLDLKSRNKVFFRVLNAVGVNSSARHVEEQLRSRGYDSRRIQLWREGLEANGS 206
            +  T+ +  + +A  Y  E+G+  L+++FEA+KA + ++ +L ++V+ S +  +H  +I++A    +++EAER+CRDS IYD AEV+E    AKLP  R  +HV ++    V+ +TEYL+     +Y++ YV +++P   P+V+G L DL +      R+L AVG       + E   +R    R +Q W E   A GS
Sbjct:  675 RGPTNMQVCVEVAKKYHEELGASELVKVFEANKATEGLYYFLGAVVNFSEDSVVHFKYIQSACMLGQFKEAERVCRDSNIYDPAEVKEYLKNAKLPDPRPLIHVCDRFD-FVDELTEYLYLNSLLQYVEVYVTKVSPTKTPQVVGKLFDLGANQDFVKRILMAVGTACPVDEMVEIAETRNR-LRMLQPWLEARVATGS 871          
BLAST of mRNA_L-elsbetiae_contig5587.13905.1 vs. uniprot
Match: A0A1Z5JH96_FISSO (Clathrin heavy chain n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JH96_FISSO)

HSP 1 Score: 118 bits (295), Expect = 8.500e-24
Identity = 65/188 (34.57%), Postives = 108/188 (57.45%), Query Frame = 0
Query:   19 LAHAYSREIGSERLLELFEASKAFDVMFLYLESIVDGSSEPRIHHAFIKAALKTNRWEEAERICRDSTIYDVAEVEEMFVKAKLPSLRAAVHVWNKQGKSVEAITEYLFRTRRYKYLQTYVGEIAPENAPRVLGTLLDLKSRNKVFFRVLNAVGVNSSARHVEEQLRSRGYDSRRIQLWREGLEANGS 206
            +A  Y  E+G+  L+++FE ++A + ++ YL ++V+ S +P +H  +I+A+    +++EAER+CRDS IY+  EV+E    AKLP  R  +HV ++    V+ +TEYL+     +Y++ YV +++P   P V+G L DL +      R+L AVG       + E   +R    R +Q W E   A GS
Sbjct:  684 VAKKYHEELGAGDLVQVFEQNRATEGLYYYLGAVVNISEDPFVHFKYIQASCMLGQFKEAERVCRDSNIYNAEEVKEYLKNAKLPDPRPLIHVCDRHD-FVDELTEYLYLNSLLQYIEVYVTKVSPGKTPMVIGKLFDLGANEDFIKRLLMAVGTACPVDELVEMAETRNR-LRLLQPWLEARVATGS 869          
BLAST of mRNA_L-elsbetiae_contig5587.13905.1 vs. uniprot
Match: A0A7S2R0C3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0C3_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.920e-23
Identity = 66/199 (33.17%), Postives = 112/199 (56.28%), Query Frame = 0
Query:    8 KAKTSTETILVLAHAYSREIGSERLLELFEASKAFDVMFLYLESIVDGSSEPRIHHAFIKAALKTNRWEEAERICRDSTIYDVAEVEEMFVKAKLPSLRAAVHVWNKQGKSVEAITEYLFRTRRYKYLQTYVGEIAPENAPRVLGTLLDLKSRNKVFFRVLNAVGVNSSARHVEEQLRSRGYDSRRIQLWREGLEANGS 206
            +  ++ +  + +A  Y  E+GSE L+ +FE +KA + ++ YL +IV+ S +P +H  +I+++    +++EAER+CRDS IY+  EV+     AKLP  R  +HV ++    V+ +T+YL+     +Y++ YV +++P   P V+G L DL +      R+L AVG       + E   +R    R +Q W E   A GS
Sbjct:  282 RGPSNMQVCVEIAKKYHEELGSEELVGVFEQNKANEGLYYYLGAIVNFSEDPFVHFKYIQSSCMLGQFKEAERVCRDSNIYEPEEVKLYLKNAKLPDPRPLIHVCDRYD-FVDELTDYLYLNSLLQYIEVYVTKVSPTKTPMVVGKLFDLGANEDFIKRILMAVGSACPVDEMVEIAETRNR-LRLLQPWLEARVATGS 478          
BLAST of mRNA_L-elsbetiae_contig5587.13905.1 vs. uniprot
Match: A0A7S3Q7D3_9STRA (Clathrin heavy chain n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7D3_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.980e-23
Identity = 64/199 (32.16%), Postives = 114/199 (57.29%), Query Frame = 0
Query:    8 KAKTSTETILVLAHAYSREIGSERLLELFEASKAFDVMFLYLESIVDGSSEPRIHHAFIKAALKTNRWEEAERICRDSTIYDVAEVEEMFVKAKLPSLRAAVHVWNKQGKSVEAITEYLFRTRRYKYLQTYVGEIAPENAPRVLGTLLDLKSRNKVFFRVLNAVGVNSSARHVEEQLRSRGYDSRRIQLWREGLEANGS 206
            +   + +  + +A  Y+ E+G++ L+++FE +KAF+ ++ YL +IV+ S +  +H  +I+++    +++EAER+CRDS IY+  EV+E    AKL   R  +HV ++    V+ +T+YL+     +Y++ YV +++P   P+V+G L DL +      R+L AVG       + E   +R    R +Q W E   A GS
Sbjct:  676 RGPANVQVCVEVAKKYNEELGAKELVKVFEENKAFEGLYYYLGAIVNFSEDAVVHFKYIQSSCMLGQFKEAERVCRDSNIYNPEEVKEYLKNAKLADPRPLIHVCDRFD-FVDELTDYLYLNSLLQYIEVYVTKVSPAKTPQVIGKLFDLGANEDFIKRILMAVGTACPVDELVEIAETRNR-LRMLQPWLEARVATGS 872          
BLAST of mRNA_L-elsbetiae_contig5587.13905.1 vs. uniprot
Match: A0A7S1YLR0_9STRA (Clathrin heavy chain n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YLR0_9STRA)

HSP 1 Score: 116 bits (290), Expect = 3.500e-23
Identity = 68/199 (34.17%), Postives = 109/199 (54.77%), Query Frame = 0
Query:    8 KAKTSTETILVLAHAYSREIGSERLLELFEASKAFDVMFLYLESIVDGSSEPRIHHAFIKAALKTNRWEEAERICRDSTIYDVAEVEEMFVKAKLPSLRAAVHVWNKQGKSVEAITEYLFRTRRYKYLQTYVGEIAPENAPRVLGTLLDLKSRNKVFFRVLNAVGVNSSARHVEEQLRSRGYDSRRIQLWREGLEANGS 206
            K   + +  + +A  Y  E+GSE L+ +FE ++A + ++ YL ++V+ S +P +H  +I+A+    +++EAER+CRDS IY   EV+E    AKL   R  +HV ++    VE +TEYL+     +Y++ YV +++P   P V+G L DL        R+L AVG       + E   +R    R +Q W E   A GS
Sbjct:  676 KGPQNMQVCVEVAKKYHEELGSEDLVTVFEQNRATEGLYYYLGAVVNVSEDPYVHFKYIQASCMLGQFKEAERVCRDSNIYQPEEVKEYLKGAKLADPRPLIHVCDRFD-FVEELTEYLYLNSLLQYIEVYVTKVSPTKTPMVIGKLFDLGGNEDFIKRMLMAVGTACPVDDLVEIAETRNR-LRLLQPWLEARVATGS 872          
BLAST of mRNA_L-elsbetiae_contig5587.13905.1 vs. uniprot
Match: S8G8J0_TOXGM (Clathrin heavy chain n=18 Tax=Sarcocystidae TaxID=5809 RepID=S8G8J0_TOXGM)

HSP 1 Score: 115 bits (289), Expect = 4.650e-23
Identity = 63/197 (31.98%), Postives = 111/197 (56.35%), Query Frame = 0
Query:    7 KKAKTSTETILVLAHAYSREIGSERLLELFEASKAFDVMFLYLESIVDGSSEPRIHHAFIKAALKTNRWEEAERICRDSTIYDVAEVEEMFVKAKLPSLRAAVHVWNKQGKSVEAITEYLFRTRRYKYLQTYVGEIAPENAPRVLGTLLDLKSRNKVFFRVLNAVGVNSSARHVEEQLRSRGYDSRRIQLWREGLEA 203
            + +  + + ++ +A  +  +IG+ +L+E+FE   +++ +F +L SI+  SS+P +H  +I+AA K N  +E ER+CR+S  Y+   V+E   + KLP  R  ++V +  G   E + EYLF+    KY++ YV  +   NAP V+GTL+D  +       +L +V    SA+ + E+   R     R++L  + LEA
Sbjct:  703 RSSSQNLQAVVAVAIKFHGQIGTTKLVEMFEKFSSYEGVFYFLGSILAFSSDPEVHFKYIEAAAKLNHTQEVERVCRESKCYEPQRVKEFLKQVKLPDPRPLIYVCDLHGYVTE-LAEYLFKNSLLKYIEVYVSRVNSANAPLVIGTLIDQDAAEDFIRNLLQSVRGGCSAQQLVEEFEKRN----RLRLLLQWLEA 894          
BLAST of mRNA_L-elsbetiae_contig5587.13905.1 vs. uniprot
Match: A0A7S1XLU7_9STRA (Clathrin heavy chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLU7_9STRA)

HSP 1 Score: 115 bits (287), Expect = 8.170e-23
Identity = 63/202 (31.19%), Postives = 111/202 (54.95%), Query Frame = 0
Query:    4 LLKKKAKTSTETILVLAHAYSREIGSERLLELFEASKAFDVMFLYLESIVDGSSEPRIHHAFIKAALKTNRWEEAERICRDSTIYDVAEVEEMFVKAKLPSLRAAVHVWNKQGKSVEAITEYLFRTRRYKYLQTYVGEIAPENAPRVLGTLLDLKSRNKVFFRVLNAVGVNSSARHVEEQLRSRGYDSRRIQLWREGLEANG 205
            +L    + +   ++ +A  Y  ++G+E L+E+ E  K+++ ++ +L ++V+ S +  +H  +I++A K  ++ E ER+CRDST+YD  +V++  + AKL   R  +HV ++    V+ +T YL      KY++ YV +++P   P V+G LLDL S       +LN VG       + EQ+  R    R +Q W E   A G
Sbjct:  676 MLATNIRVNLNLVVQIAQKYVEQLGAEPLIEMLEKFKSWEGIYYFLGAVVNFSQDALVHFKYIESAAKMGQFNEVERVCRDSTVYDPQQVKDFLMNAKLGDPRPLIHVCDRHD-FVDEMTAYLHANNLTKYIEVYVQKVSPAKTPAVIGKLLDLDSNEDFVRNLLNLVGPACPVDELVEQVERRNR-LRILQPWLEARIATG 875          
BLAST of mRNA_L-elsbetiae_contig5587.13905.1 vs. uniprot
Match: K0R8W5_THAOC (Clathrin heavy chain n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R8W5_THAOC)

HSP 1 Score: 115 bits (287), Expect = 8.220e-23
Identity = 64/199 (32.16%), Postives = 113/199 (56.78%), Query Frame = 0
Query:    8 KAKTSTETILVLAHAYSREIGSERLLELFEASKAFDVMFLYLESIVDGSSEPRIHHAFIKAALKTNRWEEAERICRDSTIYDVAEVEEMFVKAKLPSLRAAVHVWNKQGKSVEAITEYLFRTRRYKYLQTYVGEIAPENAPRVLGTLLDLKSRNKVFFRVLNAVGVNSSARHVEEQLRSRGYDSRRIQLWREGLEANGS 206
            +  ++ +  + +A  Y  E+G++ L+++FE +KA + ++ +L +IV+ S +  +H  +I++A    +++EAER+CRDS IY+  EV+     AKLP  R  +HV ++    V+ +TEYL+     +Y++ YV +++P   P+V+G L DL +      R+L AVG       + E   +R    R +Q W E   A GS
Sbjct:  700 RGPSNMQVCVEVAKKYHEELGADELVKVFENAKATEGLYYFLGAIVNFSEDAVVHFKYIQSACMLGQFKEAERVCRDSNIYNAEEVKTYLKNAKLPDPRPLIHVCDRYD-FVDELTEYLYLNSLLQYVEVYVTKVSPTKTPQVVGKLFDLGANEDFTKRILMAVGTACPVEDMVEIAETRNR-LRMLQPWLEARVATGS 896          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5587.13905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B7G4Y3_PHATC1.630e-2636.70Clathrin heavy chain n=3 Tax=Phaeodactylum tricorn... [more]
A0A7S2MCC1_9STRA1.850e-2533.67Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B8C8U9_THAPS3.750e-2534.17Clathrin heavy chain n=1 Tax=Thalassiosira pseudon... [more]
A0A1Z5JH96_FISSO8.500e-2434.57Clathrin heavy chain n=2 Tax=Fistulifera solaris T... [more]
A0A7S2R0C3_9STRA1.920e-2333.17Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S3Q7D3_9STRA1.980e-2332.16Clathrin heavy chain n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1YLR0_9STRA3.500e-2334.17Clathrin heavy chain n=1 Tax=Grammatophora oceanic... [more]
S8G8J0_TOXGM4.650e-2331.98Clathrin heavy chain n=18 Tax=Sarcocystidae TaxID=... [more]
A0A7S1XLU7_9STRA8.170e-2331.19Clathrin heavy chain n=1 Tax=Phaeomonas parva TaxI... [more]
K0R8W5_THAOC8.220e-2332.16Clathrin heavy chain n=1 Tax=Thalassiosira oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 435..465
NoneNo IPR availableCOILSCoilCoilcoord: 515..570
NoneNo IPR availableCOILSCoilCoilcoord: 475..509
NoneNo IPR availablePANTHERPTHR10292CLATHRIN HEAVY CHAIN RELATEDcoord: 1..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..276
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 277..603
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..255
IPR000547Clathrin, heavy chain/VPS, 7-fold repeatSMARTSM00299CLH_2coord: 20..163
e-value: 5.7E-8
score: 42.5
IPR000547Clathrin, heavy chain/VPS, 7-fold repeatPFAMPF00637Clathrincoord: 26..123
e-value: 1.0E-8
score: 35.1
IPR000547Clathrin, heavy chain/VPS, 7-fold repeatPROSITEPS50236CHCRcoord: 20..163
score: 10.686
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 14..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5587contigL-elsbetiae_contig5587:6368..11381 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5587.13905.1mRNA_L-elsbetiae_contig5587.13905.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5587 6280..11897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5587.13905.1 ID=prot_L-elsbetiae_contig5587.13905.1|Name=mRNA_L-elsbetiae_contig5587.13905.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=604bp
MAFLLKKKAKTSTETILVLAHAYSREIGSERLLELFEASKAFDVMFLYLE
SIVDGSSEPRIHHAFIKAALKTNRWEEAERICRDSTIYDVAEVEEMFVKA
KLPSLRAAVHVWNKQGKSVEAITEYLFRTRRYKYLQTYVGEIAPENAPRV
LGTLLDLKSRNKVFFRVLNAVGVNSSARHVEEQLRSRGYDSRRIQLWREG
LEANGSAADAGSEVETVRPTSKSSPAAAGDGNEVTTSVSGSAGHSAPSST
TLEAPWAFAIIMFLVLICNKALAFACRKSLGSMQAAHDEEAAALSAKYEE
ARSHVAELVSPKNLLDAIQGQVATRSKNEDQLRSCVAERESQLALANDCP
DEGNVAALYEYHEDAPLAAPAGAAGAVGTAAPAATTGEGDSPSATKEKKN
HRKRGRGGGPSKMKGRAKMAVKHVDTARSGVVNIRKAADAAAKAVEAKVK
ELEAKEAEAAAALEAKVRLDVVNIRNAADAAARATEAKAKELEAKAKETA
AALEAKVRLDVVNIRKAADTAARAAEAEAAALEDEVEKWEARVKVMDVRI
KEVEAKQAAEREELAQGQADAEEAATAAELEEFEAKQAAEREELAKGQAS
PSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000547Clathrin_H-chain/VPS_repeat
IPR016024ARM-type_fold