prot_L-elsbetiae_contig5563.13872.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5563.13872.1
Unique Nameprot_L-elsbetiae_contig5563.13872.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length146
Homology
BLAST of mRNA_L-elsbetiae_contig5563.13872.1 vs. uniprot
Match: D8LDR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR1_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 5.830e-64
Identity = 108/143 (75.52%), Postives = 117/143 (81.82%), Query Frame = 0
Query:    3 RNHRTRLFESIRSNREKIGRAMDRLRDAMRSGDDELAERLKAFIMHLRGKDPQFATQDAMDAALEQGLFSTAAKLKLKLADINQNPFRQSLQDIPVAPADGAGAGAGESGDISEDMSWGFDQTFFGEEGDGDGDDEPDDYDDI 145
            R+ RTRLFESIR NREKIGRAM+ LRDAMR+GD+ELAERLKAFIMHLR +DPQFATQDAMD ALEQGLFSTAAKLKLKL +INQNPFR SL D+             + GD SEDMSWGFDQTFFGEEGD   DD+PDDYDDI
Sbjct:   33 RDRRTRLFESIRGNREKIGRAMNSLRDAMRTGDEELAERLKAFIMHLRKRDPQFATQDAMDEALEQGLFSTAAKLKLKLEEINQNPFRHSLLDVSAEDGXXXXXXXXDGGDTSEDMSWGFDQTFFGEEGDNI-DDDPDDYDDI 174          
BLAST of mRNA_L-elsbetiae_contig5563.13872.1 vs. uniprot
Match: A0A6H5L051_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L051_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.150e-59
Identity = 109/148 (73.65%), Postives = 117/148 (79.05%), Query Frame = 0
Query:    3 RNHRTRLFESIRSNREKIGRAMDRLRDAMRSGDDELAERLKAFIMHLRGKDPQFATQDAMDAALEQGLFSTAAKLKLKLADINQNPFRQSLQDIPVAPADGAGAGAG-----ESGDISEDMSWGFDQTFFGEEGDGDGDDEPDDYDDI 145
            R+ RTRLFESIR NREKIGRAM+ LRDAMRSGD+EL ERLKAFIMHLR +DPQFATQDAMD ALEQGLFSTAAKLKLKL DI QNPFR SL D+     DG           + GD SEDMSWGFDQTFFGEEGD   DD+PDDYD+I
Sbjct:   78 RDRRTRLFESIRGNREKIGRAMNSLRDAMRSGDEELVERLKAFIMHLRKRDPQFATQDAMDEALEQGLFSTAAKLKLKLEDIKQNPFRHSLLDVSE---DGXXXXXXXXXXXDGGDTSEDMSWGFDQTFFGEEGDNI-DDDPDDYDNI 221          
BLAST of mRNA_L-elsbetiae_contig5563.13872.1 vs. uniprot
Match: A0A836CMC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC9_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.080e-10
Identity = 42/119 (35.29%), Postives = 61/119 (51.26%), Query Frame = 0
Query:    9 LFESIRSNREKIGRAMDRLRDAMRSGDDELAERLKAFIMHLRGKDPQFATQDAMDAALEQGLFSTAAKLKLKLADINQ-NPFRQSLQDIPVAPADGAGAGAGESGDISEDMSWGFDQTF 126
            + ES+RS  +K+ +   +LR A   GD     +L+  +  LR +DP F+ +D   AA+ +G F+ AAKLKL +  + Q NP R   +D                 D  EDMSWGFD +F
Sbjct:    1 MSESVRSRIDKVKK---KLRKAKNDGDSTEVGKLREALSALRAQDPLFSREDQYKAAILEGRFAAAAKLKLTIDKMKQENPLRPPAED---------------DHDPGEDMSWGFDPSF 101          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5563.13872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDR1_ECTSI5.830e-6475.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L051_9PHAE1.150e-5973.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CMC9_9STRA1.080e-1035.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5563contigL-elsbetiae_contig5563:8679..10177 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5563.13872.1mRNA_L-elsbetiae_contig5563.13872.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5563 8679..10177 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5563.13872.1 ID=prot_L-elsbetiae_contig5563.13872.1|Name=mRNA_L-elsbetiae_contig5563.13872.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp
MARNHRTRLFESIRSNREKIGRAMDRLRDAMRSGDDELAERLKAFIMHLR
GKDPQFATQDAMDAALEQGLFSTAAKLKLKLADINQNPFRQSLQDIPVAP
ADGAGAGAGESGDISEDMSWGFDQTFFGEEGDGDGDDEPDDYDDI*
back to top