prot_L-elsbetiae_contig556.13870.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig556.13870.1
Unique Nameprot_L-elsbetiae_contig556.13870.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1146
Homology
BLAST of mRNA_L-elsbetiae_contig556.13870.1 vs. uniprot
Match: A0A6H5KDJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDJ9_9PHAE)

HSP 1 Score: 951 bits (2459), Expect = 0.000e+0
Identity = 645/1142 (56.48%), Postives = 729/1142 (63.84%), Query Frame = 0
Query:    1 AAPWRRRRDSRRVQRSSMTLSINLGYFISTRVVAWG--------WIHPGGTSIPPRKQK----CCSSSWQRCDVKHWRGRSAS-PRSSIGRSHMLMSVIVANDSSGGSTSGSINEATAASSPSSPSPEGKKSA--PQRLPPLVSPAPR--KVNG-------AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGEKDEDGEKKWGGPAGGTNMTSPSLNSEQQLNSERQQREHEMRRLGKKGMWREALAVLASIPEPSQR--QFVAAIAACDFSGEPRQALYAYVWLLGLSRVNALSYQ-------ESVLLVVRGLLLLGDASTALRVFHSSGVRVRGRSYKPGQTSADSALTMNTLYAVVIRAAQKAGDWREAVLLYREAEAASLGPSAATATAVFLACYGEQRYAAAASLASDALRPPWEEVTQRRLLTNKIIVACGRAGPDHYQQALDTYADLDRTIGVDGYTLTAVVDVLRRLRDWRRALPLLDRLVDLGVPADQGLRTSVNAVLSAMGPDNYRRARELAERAAAEWGVSGDIVTYGTLLLLASARLPPPAPL-SSGTAVVLPAAVVAAE--PGGLRRSPGAGRGRGVEGRLFEESEVAAAAERREDGKWETVNVFWRAVEAKAVPSEACLDMVVFALARDGLWEEASAFVQAIEEAGLTVSRHQREALLSALSNGERWQDVVSLVEAMLAKSLVVDNPTAGLAVKAYANLGLKKHWRSAISLMKQAQRASRGSD--AAADVLDASAWRYLLARLASEGLNGEAGSAMQAMVEAGVPVDKDSSAAVVVAAYKAGDHAAAVAWVDRLRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETICPPSEGGYSARVRLRDDDAAAPGEGXXXAAGETTAEAVESGSGRGGVVVEINGLASTGAEAEGAGGRXXXXXXXXXXXXXGSRAAEKAESALSLFEVMWEREVPMNGVTYAIVICALLAAGREDEVLRLWTQAWSDPGAKKLRRDMANRVLGICRVQRRGGLAVRLLQLGARLAPKGQSRGKXXXXXXXXXXXXXXXXXXYWAAMEACERQGATAWRGALALADERDASPLPPDNLYSEAAAALVQEAAAAGVADAVEAASTRVWQTRE 1104
            AAP RRRR+SRR+Q SSMTL +        R  AWG        W HP G  I P++Q+       S   R D    R  S   PR    R  +LMS + A   S                 SSP PEG+ +A  P+ LPPL+ PAP   ++NG       A                XXXXXXXXXXXXXXXXXXXX   + +KD   E +WG        TS               +  EMR+LGKKG WREAL VL SIP PS++  ++VAAIAACDF+ EPRQAL          RV+ L  Q       ESVLLVVRGLL  GDA+TALRVF SSGV +RGR YK G+T+ DSA TMN LYAVVIRAAQKAGDWR AV+LYRE EA   GPSAATATAVFLACY EQ YAAAAS ASDALRPPWEEVT+RR+L NKIIVACGRAGPD+YQQALDT+ DLDRTIG DGYTLTAV+DVLRR+ DWRRAL LLDRL +LGV A++GLRTSVNAVLSAMGPDNYRRAREL E+A  EWGV GD+VTYGTLLLLASARLPPPAPL ++GT  + PAA  AA   PG    + G   G G               +  E G+WETVNVF  AV AK VPSEACLDMV+F LARDGLWEEA+AFV+AI +AGL     +REALLSALSNGE+W  VV+LV++ML    VVDN T GLA+KAYA LGL+ HWRSA+S++KQAQRASRG     AADVLD SAWR LLA LASEGL+ EAG  MQAM EA V VDKDS+AAVV+AAYKAGDHAAA+AWVDRL                                                   E+ICP SEGGYSARVRLRD   A  G       G  T EA  SG        E+NGL       E                   + AA KA+ ALSLFE MW REVPMNGVTYAIVICALL A RED+VLRLWT AWSDP  KKLR DM+NR LGIC+ QRRG LAVRLLQLGARL+PKG +                     YW AMEACER+GATAWR ALAL D+R+ SPLPPD+ +SEA A L+Q+AAA GV+DAV+AASTRVW+ RE
Sbjct:   34 AAPCRRRRESRRMQHSSMTLGL-CALLRPRRGSAWGGGHVVVEGWRHPVGPFIQPQRQQQQKVLDDSLRHRFDATFSRHSSGGCPRRGNRRPRVLMSSVAA---SXXXXXXXXXXXXXXXXXSSPFPEGEDAAALPRPLPPLLPPAPSTGQLNGGVSTTSAATLSEAARSSEANNINTXXXXXXXXXXXXXXXXXXXXENQKEDKDVCQENQWGV------STSQLEQXXXXXXXXXXAKAQEMRQLGKKGKWREALEVLRSIPGPSRQKQEYVAAIAACDFAREPRQAL----------RVHGLMVQQGLEPTPESVLLVVRGLLQAGDATTALRVFRSSGVGIRGRPYKAGRTADDSASTMNALYAVVIRAAQKAGDWRLAVVLYREMEAVKPGPSAATATAVFLACYAEQEYAAAASFASDALRPPWEEVTRRRVLMNKIIVACGRAGPDNYQQALDTFEDLDRTIGADGYTLTAVIDVLRRVGDWRRALALLDRLTELGVTANRGLRTSVNAVLSAMGPDNYRRARELVEKATVEWGVDGDVVTYGTLLLLASARLPPPAPLGATGTPSLAPAAAAAAAVPPGSAYPADGPFGGEG--------------GQEEESGQWETVNVFRWAVAAKEVPSEACLDMVMFGLARDGLWEEATAFVEAIGQAGL-----KREALLSALSNGEQWAGVVALVKSMLVDLEVVDNATVGLAMKAYAKLGLETHWRSALSVIKQAQRASRGRSRVVAADVLDGSAWRCLLAGLASEGLHEEAGVVMQAMAEARVRVDKDSTAAVVLAAYKAGDHAAAIAWVDRLDRAGLPVSRNGYTAGVNACCALGKPDAAISILGMMLEGRLVPTASVYNAVLESICPASEGGYSARVRLRDSSPALSG-------GRLTEEADGSGGEE-----ELNGLFRARERRE------DGERDEPAGLIRDTTAAAKADRALSLFEEMWAREVPMNGVTYAIVICALLRAEREDQVLRLWTLAWSDPRTKKLRTDMSNRALGICKDQRRGALAVRLLQLGARLSPKGLN------------DVAWPGPGPYWVAMEACEREGATAWRDALALVDKRNRSPLPPDDSFSEAGAGLLQQAAALGVSDAVQAASTRVWEKRE 1106          
BLAST of mRNA_L-elsbetiae_contig556.13870.1 vs. uniprot
Match: D7FVZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVZ5_ECTSI)

HSP 1 Score: 692 bits (1785), Expect = 1.010e-233
Identity = 452/715 (63.22%), Postives = 499/715 (69.79%), Query Frame = 0
Query:  408 NKIIVACGRAGPDHYQQALDTYADLDRTIGVDGYTLTAVVDVLRRLRDWRRALPLLDRLVDLGVPADQGLRTSVNAVLSAMGPDNYRRARELAERAAAEWGVSGDIVTYGTLLLLASARLPPPAPLSSG----------------TAVVLPAAVVAAEPGGLRRSPGAGRGRGVEGRLFEESEVAAAAERREDGKWETVNVFWRAVEAKAVPSEACLDMVVFALARDGLWEEASAFVQAIEEAGLTVSRHQREALLSALSNGERWQDVVSLVEAMLAKSLVVDNPTAGLAVKAYANLGLKKHWRSAISLMKQAQRASRGSD--AAADVLDASAWRYLLARLASEGLNGEAGSAMQAMVEAGVPVDKDSSAAVVVAAYKAGDHAAAVAWVDRLRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETICPPSEGGYSARVRLRDDDAAAPGEGXXXAAGETTAEAVESGSGRGGVVVEINGLASTGAEAEGAGGRXXXXXXXXXXXXXGSRAAEKAESALSLFEVMWEREVPMNGVTYAIVICALLAAGREDEVLRLWTQAWSDPGAKKLRRDMANRVLGICRVQRRGGLAVRLLQLGARLAPKGQSRGKXXXXXXXXXXXXXXXXXXYWAAMEACERQGATAWRGALALADERDASPLPPDNLYSEAAAALVQEAAAAGVADAVEAASTRVWQTRE 1104
            NKIIVACGRAGPDHY+QALDT+ DLDRTIG DGYTLTAV+DVLRRL DWRRAL LLDRL +LGV A++GLRTSVNAVLSAMGPDNY RAREL  +A  EWGV GD+VTYGTLLLLASARLPPPAPL S                     +P A  +A P G    P  G G                 E  E G+WETV+V   AV AK VPSEACLDMVVF LARDGLWEEA+AFV+AI  AGL VSRHQREALLSALSNGERW  VV+L ++ML    VVDN TAGLA+KAYA LGL+ HWRSA+S+MK+AQRASRG     AADVLD SAWR LLA LASEGL+ EAG+ MQAM EAGV VDKDS+AAVV+AAYKAGDHAA          XXXXXXXXXXXXXXXXXXXXXXXXXXXX                     E+ICP SEGGYSARVRLRD   A  G       G    EA  SG G G    E+NGL+      E  GGR              + AA KA+ ALSLFE MW REVPMNGVTYAIVICALL A REDEVLRLWT AWSDP  KKLRRDM+NRVLGIC+ QRRG LAVRLLQLGARL+PKG +                     YWAAMEACER+GATAWR ALAL D+R+ SPLPPD+L+SEA A L+Q+AAA G++DAV+AASTRVW+ +E
Sbjct:    2 NKIIVACGRAGPDHYRQALDTFEDLDRTIGADGYTLTAVIDVLRRLGDWRRALALLDRLNELGVTANRGLRTSVNAVLSAMGPDNYHRARELVVKATVEWGVDGDVVTYGTLLLLASARLPPPAPLGSAGXXXXXXXXXXXXXXXXXXXVPRA--SAYPAG---GPFGGEG----------------GEEEESGQWETVDVLRWAVAAKEVPSEACLDMVVFGLARDGLWEEATAFVEAIGLAGLKVSRHQREALLSALSNGERWAGVVALAKSMLVDLNVVDNATAGLAMKAYAKLGLETHWRSALSVMKKAQRASRGGSRVVAADVLDGSAWRCLLAGLASEGLHEEAGAVMQAMPEAGVMVDKDSTAAVVLAAYKAGDHAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILGMMLEGRLVPTASVYNAVLESICPASEGGYSARVRLRDSSPALSG-------GRLPEEADGSG-GEG----ELNGLSHARGRGE-DGGRDEPAGLRRD-----TTAAAKADRALSLFEEMWTREVPMNGVTYAIVICALLRAEREDEVLRLWTLAWSDPSTKKLRRDMSNRVLGICKEQRRGALAVRLLQLGARLSPKGLN------------DVAWPGPGPYWAAMEACEREGATAWRDALALVDKRNGSPLPPDDLFSEAGAGLLQQAAALGISDAVQAASTRVWEKQE 665          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig556.13870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KDJ9_9PHAE0.000e+056.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVZ5_ECTSI1.010e-23363.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 915..1004
e-value: 2.6E-6
score: 29.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 401..527
e-value: 8.1E-7
score: 30.7
coord: 212..400
e-value: 1.3E-8
score: 36.6
coord: 691..879
e-value: 2.8E-13
score: 51.9
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 608..836
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..1145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availableTMHMMTMhelixcoord: 20..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig556contigL-elsbetiae_contig556:25101..33724 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig556.13870.1mRNA_L-elsbetiae_contig556.13870.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig556 25101..33724 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig556.13870.1 ID=prot_L-elsbetiae_contig556.13870.1|Name=mRNA_L-elsbetiae_contig556.13870.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1146bp
AAPWRRRRDSRRVQRSSMTLSINLGYFISTRVVAWGWIHPGGTSIPPRKQ
KCCSSSWQRCDVKHWRGRSASPRSSIGRSHMLMSVIVANDSSGGSTSGSI
NEATAASSPSSPSPEGKKSAPQRLPPLVSPAPRKVNGAAAEAAAAAAGRS
DNLTPDSIRRNNSKQGGGRKPQQQQESEGEKDEDGEKKWGGPAGGTNMTS
PSLNSEQQLNSERQQREHEMRRLGKKGMWREALAVLASIPEPSQRQFVAA
IAACDFSGEPRQALYAYVWLLGLSRVNALSYQESVLLVVRGLLLLGDAST
ALRVFHSSGVRVRGRSYKPGQTSADSALTMNTLYAVVIRAAQKAGDWREA
VLLYREAEAASLGPSAATATAVFLACYGEQRYAAAASLASDALRPPWEEV
TQRRLLTNKIIVACGRAGPDHYQQALDTYADLDRTIGVDGYTLTAVVDVL
RRLRDWRRALPLLDRLVDLGVPADQGLRTSVNAVLSAMGPDNYRRARELA
ERAAAEWGVSGDIVTYGTLLLLASARLPPPAPLSSGTAVVLPAAVVAAEP
GGLRRSPGAGRGRGVEGRLFEESEVAAAAERREDGKWETVNVFWRAVEAK
AVPSEACLDMVVFALARDGLWEEASAFVQAIEEAGLTVSRHQREALLSAL
SNGERWQDVVSLVEAMLAKSLVVDNPTAGLAVKAYANLGLKKHWRSAISL
MKQAQRASRGSDAAADVLDASAWRYLLARLASEGLNGEAGSAMQAMVEAG
VPVDKDSSAAVVVAAYKAGDHAAAVAWVDRLRSAGLAISRNGYSAAVSAC
CALGNPDAAAGILGAMSEARVVATASAYNAVLETICPPSEGGYSARVRLR
DDDAAAPGEGEGEAAGETTAEAVESGSGRGGVVVEINGLASTGAEAEGAG
GRRKEPPEEESGRGGGSRAAEKAESALSLFEVMWEREVPMNGVTYAIVIC
ALLAAGREDEVLRLWTQAWSDPGAKKLRRDMANRVLGICRVQRRGGLAVR
LLQLGARLAPKGQSRGKGREGEGEGKDLPWPGPGPYWAAMEACERQGATA
WRGALALADERDASPLPPDNLYSEAAAALVQEAAAAGVADAVEAASTRVW
QTREGKVAGGGGGGGGGRRAGRVRAGAGATATAAVEQRAETASTD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf