prot_L-elsbetiae_contig5557.13865.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5557.13865.1
Unique Nameprot_L-elsbetiae_contig5557.13865.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length324
Homology
BLAST of mRNA_L-elsbetiae_contig5557.13865.1 vs. uniprot
Match: D8LG45_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG45_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 3.200e-100
Identity = 191/314 (60.83%), Postives = 210/314 (66.88%), Query Frame = 0
Query:    1 MRRIFWASTAVLGVVVLTGLSRNAGSKFVRTLPQPGCLRNYADAADSRKQLPP--ELVCCTERAQDEGVCAGGRHPTTRVLTSKWAFVVPLVALAVNAFCDWLAGGATAARTRARRNRFFLYSAVMLVRTLALYLGLGYIQELVQAEESGNCWYAHIRRGGRCSEHFDFADHVVLGVCQYFAIQASRTRSYRIAFELSCLAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSSXXXXXXXTTPPSVFLCALPATTVCVAVAGTSLLLVYDTAAFFHTRAETAVALAISWFAVGSPLLSLMG 312
            MRR+F   TAVL  V   GLSRNAGSKFVRT  Q GC RNYA+ A +R +  P  +L+CCT   +D+GVC GG   TT+ LTSK AFV+PL ALAVNAFCDWLAGGAT +RTRAR NRF LY AV+L RTL LYLGL YIQ LVQ+EES NCWYAH+RR G+CSEHFDFADHVVL VCQY+AIQ          FEL C+                           XXXXXXXXXXXXXXXX   X         PS FL  LPA  VC AVAG +LLLVYDTAA FH+RAET  AL ISWF VG PLLSL G
Sbjct:    1 MRRMFLTFTAVLVAVACAGLSRNAGSKFVRTRVQQGCRRNYANVATARSREKPSLDLICCTGSVEDDGVCIGGGSRTTKTLTSKLAFVIPLAALAVNAFCDWLAGGATPSRTRARWNRFLLYVAVILGRTLGLYLGLNYIQGLVQSEESSNCWYAHLRRSGKCSEHFDFADHVVLAVCQYYAIQV---------FELCCILREYGDFSRQAAAIASGLQRKPSPTPSXXXXXXXXXXXXXXXXXXXXLR-------PSPFLSVLPAAAVCAAVAGAALLLVYDTAALFHSRAETVAALVISWFVVGEPLLSLTG 298          
BLAST of mRNA_L-elsbetiae_contig5557.13865.1 vs. uniprot
Match: W7TJS9_9STRA (Uncharacterized protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJS9_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 8.820e-20
Identity = 80/243 (32.92%), Postives = 103/243 (42.39%), Query Frame = 0
Query:    4 IFWASTAVLGVVVLTGLSRNAGSKFVRTLPQPGCLRNYADAADSRK-----QLPPE------LVCCTERAQDEG-------VCAGGRHPTTRVLTSKWAFVVPLVALAVN----AFCDWLAGGATAARTRAR------------------RNRFFLYSAVMLVRTLALYLGLGYIQELVQAEESGNCWYAHIRRGGRCSEHFDFADHVVLGVCQYFAIQASRT----RSYRIAFEL-SCLAPA 201
            +F      + +V    L  NAG K+VR + QPGC   +AD            LP         +   +    EG       +CA    P T+ LTS  A V+P V   +N    A   W   G    + R +                  R R  LY+AV++ RT  L + L  +Q  VQAEE   CWY+ +R  GRC E FDFADH VL + QY AIQ   T    R  R    L +CLA A
Sbjct:   50 LFTLELLTIALVFSKALHHNAGKKYVRVV-QPGCHVAWADMNGDHSTVACCSLPSSSTTFLSFLLGGDDPPSEGQDGWKNPLCAAATSPRTKHLTSGLALVLPFVTWFLNCLFSAVAGWWGEGGRTEKGRGKDEEGKEGRRRREAIWTGQRRRLGLYAAVIMFRTAVLLMLLNRVQAWVQAEEGDTCWYSALRHDGRCRERFDFADHGVLFISQYLAIQTFETVAILREARSLLHLVTCLASA 291          
BLAST of mRNA_L-elsbetiae_contig5557.13865.1 vs. uniprot
Match: A0A3R7Y039_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7Y039_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.420e-16
Identity = 70/189 (37.04%), Postives = 91/189 (48.15%), Query Frame = 0
Query:    1 MRRIFWASTAVLGVVVLTGLSRNAGSKFVRTLPQPGCLRNY--ADAADSRKQLPPELVCCTER--AQDEGVCAGGRHPTTRVLTSKWAFVVPLVALAVNAFCDWLAGGATAARTRARRNRFFLYSAVMLVRTLALYLGLGYIQE----LVQAEESGNCWYAHIRRGGRCSEHFDFADHVVLGVCQYFAI 181
            MRRIF    A+L + V    S     KFVR   Q  C  N+   DA D+      E +CC        +  C  G      + + K A+V+PL AL +N     L    T  R R    R  LY+AVM +RT+ LY+GLG +++    LV      +CWYA  RRG RC   FD +DH+VL V  Y AI
Sbjct:   27 MRRIFLILNALLLIFVFY-TSYCFPHKFVRV--QGECDSNWLRVDAPDNS-----ETICCKNEPGGYADAPCYIGMDLMPVLGSLKGAWVIPLSALVLNYGSMMLGPDVTMRRVRVYVRRGLLYAAVMTLRTVVLYMGLGQVEKKLGYLVLGSSDQSCWYADRRRGKRCPIGFDHSDHIVLLVSHYMAI 207          
BLAST of mRNA_L-elsbetiae_contig5557.13865.1 vs. uniprot
Match: A0A2P4Y7Y0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y7Y0_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 5.660e-15
Identity = 60/167 (35.93%), Postives = 79/167 (47.31%), Query Frame = 0
Query:   21 SRNAGSKFVRTLPQPGCLRNYADAADSRKQLPPELVCCTERA--QDEGVCAGGRHPTTRVLTSKWAFVVPLVALAVNAFCDWLAGGATAARTRARRNRFFLYSAVMLVRTLALYLGLGYIQE----LVQAEESGNCWYAHIRRGGRCSEHFDFADHVVLGVCQYFAI 181
            SR    KFVR   Q  C  N+    DS +    E +CC   A   +   C  G      + + K A+ +PL AL  N     L    T  R R    R  LY AVM +RT+ LY+GLG +++    L   +   +CWYA +RRG RC   FD +DH+VL    Y AI
Sbjct:   46 SRRFPHKFVRV--QGDCDSNWLHV-DSPEDS--ETICCNNEAGGYENAPCYTGMDLMPVLGSLKGAWTIPLSALVFNYGSMMLGPNVTMPRVRVYVRRGLLYVAVMALRTVVLYMGLGLVEKRLLHLFVGQSDHSCWYADLRRGKRCPAGFDHSDHIVLLASHYVAI 207          
BLAST of mRNA_L-elsbetiae_contig5557.13865.1 vs. uniprot
Match: A0A6A3UAK4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UAK4_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.060e-14
Identity = 64/188 (34.04%), Postives = 88/188 (46.81%), Query Frame = 0
Query:    2 RRIFWASTAVLGVVVLTGLSRNAGSKFVRTLPQPGCLRNY--ADAADSRKQLPPELVCCTERA--QDEGVCAGGRHPTTRVLTSKWAFVVPLVALAVNAFCDWLAGGATAARTRARRNRFFLYSAVMLVRTLALYLGLGYIQE----LVQAEESGNCWYAHIRRGGRCSEHFDFADHVVLGVCQYFAI 181
            R  F +  A+L + V    S+    KFVR   Q  C  N+   DA +       E +CC   A   +E  C  G      + + + A+ +PL AL  +     L    T  R R    R  LY AVM +RT+ LY+GLG +++    L+       CWYA +RRG RC   FD +DH+VL V  Y AI
Sbjct:   28 RGTFMSVNALLLLAVFY-TSQRFPHKFVRV--QGDCDSNWLHVDAPEGS-----EAICCNNEAGGYEEAPCYTGMDLMPVLGSMQGAWAIPLSALVFSYGSMMLGPNVTMHRVRVYVRRGLLYVAVMALRTVVLYMGLGLVEKRLVHLLMGHSDHACWYADLRRGKRCPADFDHSDHIVLLVSHYLAI 207          
BLAST of mRNA_L-elsbetiae_contig5557.13865.1 vs. uniprot
Match: A0A4D9CR10_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CR10_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.570e-10
Identity = 52/155 (33.55%), Postives = 66/155 (42.58%), Query Frame = 0
Query:   67 VCAGGRHPTTRVLTSKWAFVVPLVALAVN----AFCDWLAGGATA------------------ARTRARRNRFFLYSAVMLVRTLALYLGLGYIQELVQ-------------AEESGNCWYAHIRRGGRCSEHFDFADHVVLGVCQYFAIQASRT 186
            +CA    P T+ LTS  A V+P +   +N    A   W   G                     A    +R R  LY+AV++ RT  L + L  +Q  VQ             AEE   CWY+ +R   RC E FDFADH VL + QY AIQ   T
Sbjct:  143 LCAAATSPRTKHLTSGLALVLPFLTWFLNCLFSAVAGWWGEGXXXXXXXXXXXXXXXXXXXRDAIWTGQRRRLGLYAAVIMFRTTVLLMLLNRVQAWVQGVMPEESGREGGRAEEGDTCWYSALRHDRRCRERFDFADHGVLFISQYLAIQTFET 297          
BLAST of mRNA_L-elsbetiae_contig5557.13865.1 vs. uniprot
Match: A0A6G0W5X3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W5X3_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 9.530e-10
Identity = 42/126 (33.33%), Postives = 61/126 (48.41%), Query Frame = 0
Query:   56 VCCTERAQDEGVCAGGRHPTTRVLTSKWAFVVPLVALAVNAFCDWLAGGATAARTRARRNRFFLYSAVMLVRTLALYLGLGYIQELVQAEESGNCWYAHIRRGGRCSEHFDFADHVVLGVCQYFAI 181
            VCC     +E  C  G H    + T + A+V+PL A+  N             +  A  NR  LY A+M+ RT+ LY+    I+  +      +CWYA  RR  +C + FD ADH+VL +  + AI
Sbjct:   57 VCCDR--SNEAPCYPGMHEMHIISTGQAAWVLPLTAVFFNFGVSVFLPSVPYRQVSALFNRLGLYFAIMVFRTVVLYILFNVIEHSLFPRPK-SCWYAKYRRNNKCLDGFDHADHIVLYMVHFLAI 179          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5557.13865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LG45_ECTSI3.200e-10060.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TJS9_9STRA8.820e-2032.92Uncharacterized protein n=3 Tax=Nannochloropsis ga... [more]
A0A3R7Y039_9STRA2.420e-1637.04Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A2P4Y7Y0_9STRA5.660e-1535.93Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6A3UAK4_9STRA1.060e-1434.04Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A4D9CR10_9STRA4.570e-1033.55Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6G0W5X3_9STRA9.530e-1033.33Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 256..280
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..82
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 281..291
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 316..324
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 139..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 292..315
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..138
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.602
NoneNo IPR availableTMHMMTMhelixcoord: 258..280
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 293..315
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 5..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5557contigL-elsbetiae_contig5557:2265..8447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5557.13865.1mRNA_L-elsbetiae_contig5557.13865.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5557 2144..8447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5557.13865.1 ID=prot_L-elsbetiae_contig5557.13865.1|Name=mRNA_L-elsbetiae_contig5557.13865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=324bp
MRRIFWASTAVLGVVVLTGLSRNAGSKFVRTLPQPGCLRNYADAADSRKQ
LPPELVCCTERAQDEGVCAGGRHPTTRVLTSKWAFVVPLVALAVNAFCDW
LAGGATAARTRARRNRFFLYSAVMLVRTLALYLGLGYIQELVQAEESGNC
WYAHIRRGGRCSEHFDFADHVVLGVCQYFAIQASRTRSYRIAFELSCLAP
APPPPPRPPAPPPPPPPPPPPSPSPAPSSSASPSSSSSATSRSSPQPPPP
PTTPPSVFLCALPATTVCVAVAGTSLLLVYDTAAFFHTRAETAVALAISW
FAVGSPLLSLMGAGVRDGVGGGGS
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