prot_L-elsbetiae_contig5554.13864.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5554.13864.1
Unique Nameprot_L-elsbetiae_contig5554.13864.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length733
Homology
BLAST of mRNA_L-elsbetiae_contig5554.13864.1 vs. uniprot
Match: A0A6H5J8H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H8_9PHAE)

HSP 1 Score: 436 bits (1122), Expect = 3.460e-133
Identity = 343/674 (50.89%), Postives = 379/674 (56.23%), Query Frame = 0
Query:    1 QDAGFAPAVAFQTVAAEGISGLLCAQLQALVETALLPLARFTAELSEMDALAKSCKRKGESEHHYARKVNELNSKLETERREDKRAVLQEKVARNINKLTAARRGREEASEELHRLVDSSQQSSHDCFNPVFASICQFQEASY---SHGHLLSSMLLRVVQSSLGTTALPFATAAADAAMLPMPTTAVPSSSSP-----VPEGEREGVLRWRDDEDDG---AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGVDCGVERYASDGSTXXXXXXXXXXXGDGKHGIAAETDXXXXXCGGSAQPDEAQPPRTKDEREHASLRGVPRAPQARDERGHENDGDTGPVPGEERLDAAAEMKMKKGRGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGWGVQISCRPPPGTFFEAHLPWGKRRRVSGNLRWKMGQRARQHRQV--------------FCAAEGRELVMYDSESDSNAGLPPRARYLVMDVRSEKTGPGSLELDVTVADDSELTTLGWSGNANAAAAPGLAFVETRSVTLTAPGRHEHARWHLALEEAHSWTEQKERDALMEELELSLPFRESAIEHVQHCLPDATINDILGVSAARDNPECVLKSMVFDAVEAAEVAAAAASTGPLSSP 649
            QDAGFAPAVAFQTVAAEG+SGLLCAQLQALV+TAL PLARFTAEL EMD L K+C+RK ESEHHYA+KVNELNSKLE ERREDKRAVLQEK ARNI KL A      +ASEEL RLV SS QSSHDCF+PVFASICQFQEASY   S G    +M     Q+S      P A       ++P+  TAV +  +        E    GVL  R+ +  G   A                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             D  T              K G  A         GGS                     GV   PQAR                                                                                             PP G F EAHLPWGKRRR+SGNLR K+    R  R+V              FCAAEGRELV+YD+ESDSNAGLPPRARYLVM VR+ KTGP + EL+VTVAD+SE+++LGW   A+    PG+AFVETRSVTLTA GRHEHARW LALEEA SWTE+KER+AL+EELELSLPFRE AIEHV H LPD+TI DILGVS A  NP CVLKS+VFDA EAA  AA AA+ GPLSSP
Sbjct:   31 QDAGFAPAVAFQTVAAEGVSGLLCAQLQALVQTALRPLARFTAELGEMDTLFKACQRKRESEHHYAKKVNELNSKLEAERREDKRAVLQEKAARNIRKLAAXXXXXXQASEELSRLVVSSHQSSHDCFDPVFASICQFQEASYRASSSGETTGAMPATPAQTS------PLAPPRL-LRLVPLGATAVVTEKTGSRTLGTVEAVVPGVLGRRNRDGSGGVLALHEGERLVRQKKVVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDDETPERGEDRPVVPAGAKTGADAAPPGAGVDWGGSG--------------------GVTTVPQARP-------------------------------------------------------------------------------------------TPPQGPFLEAHLPWGKRRRMSGNLRLKISGGGRVARRVATSGGREWGVWGGVFCAAEGRELVVYDAESDSNAGLPPRARYLVMGVRALKTGPNAAELEVTVADESEVSSLGWRERASTG--PGVAFVETRSVTLTASGRHEHARWSLALEEAQSWTEKKEREALLEELELSLPFREYAIEHVHHRLPDSTIEDILGVSTAMTNPGCVLKSVVFDAAEAAASAAEAAAPGPLSSP 584          
BLAST of mRNA_L-elsbetiae_contig5554.13864.1 vs. uniprot
Match: D8LRB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB3_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 8.890e-62
Identity = 116/145 (80.00%), Postives = 127/145 (87.59%), Query Frame = 0
Query:    1 QDAGFAPAVAFQTVAAEGISGLLCAQLQALVETALLPLARFTAELSEMDALAKSCKRKGESEHHYARKVNELNSKLETERREDKRAVLQEKVARNINKLTAARRGREEASEELHRLVDSSQQSSHDCFNPVFASICQFQEASYSH 145
            +DAGFAPAVAFQTVAAEG+SGLLCAQLQALV+T L PLARFTAEL EMD L+K+C+RK ESEHHYA+KVNELN KLE ERREDKRAVLQEK ARNI KL AAR  R++ASEEL RLV  S QSSHDC +PVFASICQFQEASY +
Sbjct:   48 EDAGFAPAVAFQTVAAEGVSGLLCAQLQALVQTTLRPLARFTAELGEMDTLSKACQRKRESEHHYAKKVNELNGKLEAERREDKRAVLQEKAARNIRKLAAARTVRKQASEELSRLVVISHQSSHDCLDPVFASICQFQEASYRY 192          
BLAST of mRNA_L-elsbetiae_contig5554.13864.1 vs. uniprot
Match: D8LRB4_ECTSI (Cell surface protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB4_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 4.220e-42
Identity = 92/128 (71.88%), Postives = 105/128 (82.03%), Query Frame = 0
Query:  498 MDVRSEKTGPGSLELDVTVADDSELTTLGWSGNANAAAAPGLAFVETRSVTLTAPGRHEHARWHLALEEAHSWTEQKERDALMEELELSLPFRESAIEHVQHCLPDATINDILGVSAARDNPECVLKS 625
            M VR+ KTGP + EL+VTVAD+SE+++LGW   A+    PG+AFVETRSVTLTA GRHEHARW LALEEA SWTE+KER+AL+EELELSLPFRE AIEHV H LPD+ I DILGVS A  NP CVLKS
Sbjct:    1 MGVRALKTGPNAAELEVTVADESEVSSLGWRERASTG--PGVAFVETRSVTLTAYGRHEHARWSLALEEAQSWTEKKEREALLEELELSLPFREYAIEHVHHRLPDSAIEDILGVSTAMTNPGCVLKS 126          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5554.13864.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J8H8_9PHAE3.460e-13350.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRB3_ECTSI8.890e-6280.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRB4_ECTSI4.220e-4271.88Cell surface protein n=1 Tax=Ectocarpus siliculosu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60coord: 1..150
e-value: 4.8E-7
score: 31.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5554contigL-elsbetiae_contig5554:2536..12366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5554.13864.1mRNA_L-elsbetiae_contig5554.13864.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5554 2536..12366 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5554.13864.1 ID=prot_L-elsbetiae_contig5554.13864.1|Name=mRNA_L-elsbetiae_contig5554.13864.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=733bp
QDAGFAPAVAFQTVAAEGISGLLCAQLQALVETALLPLARFTAELSEMDA
LAKSCKRKGESEHHYARKVNELNSKLETERREDKRAVLQEKVARNINKLT
AARRGREEASEELHRLVDSSQQSSHDCFNPVFASICQFQEASYSHGHLLS
SMLLRVVQSSLGTTALPFATAAADAAMLPMPTTAVPSSSSPVPEGEREGV
LRWRDDEDDGARDGGTDGGATNDAAAAAAAAAAADRGASEDGAGGYGDGG
GGGGGAAAADGVDCGVERYASDGSTGSGGGCDGGGGGDGKHGIAAETDGG
GGGCGGSAQPDEAQPPRTKDEREHASLRGVPRAPQARDERGHENDGDTGP
VPGEERLDAAAEMKMKKGRGEEEQEENAGGGEEEEEDEDLVMAAGANGEV
ATPPLPNKAAGAAAAAAGGGRGWGVQISCRPPPGTFFEAHLPWGKRRRVS
GNLRWKMGQRARQHRQVFCAAEGRELVMYDSESDSNAGLPPRARYLVMDV
RSEKTGPGSLELDVTVADDSELTTLGWSGNANAAAAPGLAFVETRSVTLT
APGRHEHARWHLALEEAHSWTEQKERDALMEELELSLPFRESAIEHVQHC
LPDATINDILGVSAARDNPECVLKSMVFDAVEAAEVAAAAASTGPLSSPS
PEVAGSGGRTGSCRRASHSSGGVGGGVGGGSARRGPGLPSASLRGWVERL
SIFDTLARSPPPPGGEDPSGGGYLSGELFFFF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf