prot_L-elsbetiae_contig555.13854.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig555.13854.1
Unique Nameprot_L-elsbetiae_contig555.13854.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length249
Homology
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BLAST of mRNA_L-elsbetiae_contig555.13854.1 vs. uniprot
Match: D7FLE1_ECTSI (FoP_duplication domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLE1_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 1.930e-42
Identity = 150/248 (60.48%), Postives = 162/248 (65.32%), Query Frame = 0 
Query:   10 LEAQRVVVKPVHNMGATQRRVDIDSRRKVGRQTQFDARRQGVGNAKPAMRAAQSRVVSPRQQ--PQXXXXXXXXXXXXXXXXXXXGGGRNQNQKPMAPRTNLQKTAGRGG-------AANGRGPGRGAXXXXXXXXXXXXXXXXXXXXXXXGGRGXXXXXXXXXXNDNKAAAKPVDLDEGLDEYWFKAGKGPDPKVASXXXXXXXXXXXXXEKTNGDAAAGDKMEDTDAPEAAAVAPVAPVADIDPEL 248
            +EA R +VKPV N G +QRR ++DSRRKVGRQ Q D+RRQGV NAKPAMRAAQS+VVSPRQQ  PQ                   GGGRNQ    M  R N                A++GRG G   XXXXXXXXXXXXXXXXXXXXXXX            XX       K  DLDEGLDEYWFKAGKGPDPKVASXXXXXXXXXXXX +KTNGDAAAGDKMEDTDAP   A   VAPVA +DP+L
Sbjct:    1 MEANRAIVKPVFNNGISQRRSEMDSRRKVGRQIQVDSRRQGVANAKPAMRAAQSKVVSPRQQTAPQRVQGRGRGRSTQA------GGGRNQRSGGMPVRNNXXXXXXXXXXXXXXXXASSGRGVGXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXKETDLDEGLDEYWFKAGKGPDPKVASXXXXXXXXXXXXTDKTNGDAAAGDKMEDTDAP---APVVVAPVAGVDPDL 227
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BLAST of mRNA_L-elsbetiae_contig555.13854.1 vs. uniprot
Match: A0A6H5JG09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG09_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 4.340e-20
Identity = 48/62 (77.42%), Postives = 55/62 (88.71%), Query Frame = 0 
Query:   10 LEAQRVVVKPVHNMGATQRRVDIDSRRKVGRQTQFDARRQGVGNAKPAMRAAQSRVVSPRQQ 71
            +EA RV+VKPV N G +QRR ++DSRRKVGRQ QFD+RRQGV NAKPAMRAAQS+VVSPRQQ
Sbjct:    1 MEANRVIVKPVFNNGISQRRGEMDSRRKVGRQVQFDSRRQGVANAKPAMRAAQSKVVSPRQQ 62
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig555.13854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLE1_ECTSI1.930e-4260.48FoP_duplication domain-containing protein n=1 Tax=... [more]
A0A6H5JG09_9PHAE4.340e-2077.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025715Chromatin target of PRMT1 protein, C-terminalSMARTSM01218FoP_duplication_2coord: 121..213
e-value: 2.9E-12
score: 56.7
IPR025715Chromatin target of PRMT1 protein, C-terminalPFAMPF13865FoP_duplicationcoord: 127..210
e-value: 5.4E-15
score: 55.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig555contigL-elsbetiae_contig555:17910..21313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig555.13854.1mRNA_L-elsbetiae_contig555.13854.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig555 17910..21313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig555.13854.1 ID=prot_L-elsbetiae_contig555.13854.1|Name=mRNA_L-elsbetiae_contig555.13854.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp
MSLSARFEQLEAQRVVVKPVHNMGATQRRVDIDSRRKVGRQTQFDARRQG
VGNAKPAMRAAQSRVVSPRQQPQQQQQQPRTQGRGRGRSFQAGGGRNQNQ
KPMAPRTNLQKTAGRGGAANGRGPGRGAGRTGGRGAGRTGGRGNNTAGGR
GGGRGGRGAGRGGRGNDNKAAAKPVDLDEGLDEYWFKAGKGPDPKVASLD
RGLDSYWSKASEKTNGDAAAGDKMEDTDAPEAAAVAPVAPVADIDPEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025715FoP_C