prot_L-elsbetiae_contig5548.13849.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5548.13849.1
Unique Nameprot_L-elsbetiae_contig5548.13849.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length277
Homology
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BLAST of mRNA_L-elsbetiae_contig5548.13849.1 vs. uniprot
Match: A0A6H5JX10_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX10_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 4.390e-87
Identity = 154/201 (76.62%), Postives = 171/201 (85.07%), Query Frame = 0 
Query:   57 IYRPIGDDAMEKIGRELSELVIASRPDDCTHLETLLAQIRKKDPERLRIVLRRNTTFAFPQGHFLAAACSNGKVAAADILLRYGVDPNQQCPSGSTALHLACYNGKASCVGLLLGLPGTLRGPMVLAGVRQPCAASPRVTPACGTHALIHACRGANEKAAEEIVDALLRADPSLPVRAAEGALALHAAAASGFPRVLEMLL 257
            +YR IGD+  +KIGRELSELV++SRPDDC+ LE LLAQ  K+ P+RL+ VL RNTTFAFPQGH LAAACSNGKVAAAD+LLRYGV+PN+QCPSGSTAL LACYNG+ +CV LLLGLPG+LRG  V AGV  P  ASPRV PA G +ALIHACR  NEKAAEEIV ALL ADPSLP+ AAEGALALHAAAASGFPRVLE LL
Sbjct:   60 VYRAIGDETTDKIGRELSELVMSSRPDDCSKLEALLAQTHKQHPKRLQTVLHRNTTFAFPQGHMLAAACSNGKVAAADLLLRYGVEPNKQCPSGSTALSLACYNGRTACVKLLLGLPGSLRGTAV-AGVGVPSRASPRVAPAYGANALIHACRCTNEKAAEEIVGALLEADPSLPLEAAEGALALHAAAASGFPRVLERLL 259
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BLAST of mRNA_L-elsbetiae_contig5548.13849.1 vs. uniprot
Match: D8LKA6_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA6_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 1.280e-86
Identity = 151/201 (75.12%), Postives = 171/201 (85.07%), Query Frame = 0 
Query:   57 IYRPIGDDAMEKIGRELSELVIASRPDDCTHLETLLAQIRKKDPERLRIVLRRNTTFAFPQGHFLAAACSNGKVAAADILLRYGVDPNQQCPSGSTALHLACYNGKASCVGLLLGLPGTLRGPMVLAGVRQPCAASPRVTPACGTHALIHACRGANEKAAEEIVDALLRADPSLPVRAAEGALALHAAAASGFPRVLEMLL 257
            ++R IGD+  +KIGRE+SELV++SRPDDC+ LE LLAQ  K+ P+RL+ VL RNTTF+FPQGH LAAACSNGKVAAAD+LLRYGV+PN+QCPSGSTAL LACYNG+ +CV LLLGLPG+LRGP V AGV  P  ASPRV PA G +ALIHACR  NEKAAEEIV ALL ADPSLP+ AAEGALALHAAA SGFPRVLE LL
Sbjct:   61 VHRAIGDETTDKIGREVSELVMSSRPDDCSKLEALLAQTHKQHPKRLQTVLHRNTTFSFPQGHMLAAACSNGKVAAADLLLRYGVEPNKQCPSGSTALSLACYNGRTACVKLLLGLPGSLRGPAV-AGVGVPSRASPRVAPAYGANALIHACRCTNEKAAEEIVGALLEADPSLPLEAAEGALALHAAAVSGFPRVLERLL 260
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5548.13849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JX10_9PHAE4.390e-8776.62HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LKA6_ECTSI1.280e-8675.12HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 236..265
e-value: 58.0
score: 12.6
coord: 116..145
e-value: 590.0
score: 6.7
coord: 199..232
e-value: 360.0
score: 8.3
coord: 149..178
e-value: 0.89
score: 18.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 51..178
e-value: 1.7E-13
score: 52.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 180..272
e-value: 4.7E-7
score: 31.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 120..261
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 123..227
e-value: 7.4E-9
score: 36.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 121..258
score: 14.318
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 88..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5548contigL-elsbetiae_contig5548:4861..7444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5548.13849.1mRNA_L-elsbetiae_contig5548.13849.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5548 4861..7474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5548.13849.1 ID=prot_L-elsbetiae_contig5548.13849.1|Name=mRNA_L-elsbetiae_contig5548.13849.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=277bp
MSDNGSHGGGRGGRGGGSTRGGGGGRGNRNNHRRRNNNNHSSRRSAPATI
TTAAETIYRPIGDDAMEKIGRELSELVIASRPDDCTHLETLLAQIRKKDP
ERLRIVLRRNTTFAFPQGHFLAAACSNGKVAAADILLRYGVDPNQQCPSG
STALHLACYNGKASCVGLLLGLPGTLRGPMVLAGVRQPCAASPRVTPACG
THALIHACRGANEKAAEEIVDALLRADPSLPVRAAEGALALHAAAASGFP
RVLEMLLSYEYFPNPSGESPESRRKVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom