prot_L-elsbetiae_contig116.1383.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig116.1383.1
Unique Nameprot_L-elsbetiae_contig116.1383.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length489
Homology
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BLAST of mRNA_L-elsbetiae_contig116.1383.1 vs. uniprot
Match: D8LDV3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDV3_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 1.050e-11
Identity = 49/104 (47.12%), Postives = 62/104 (59.62%), Query Frame = 0 
Query:  106 MTRIEELARDVVLAVVPTKAVLLAPITELRGSGGSAGAVLAGRAEAAGARNVPPLLEILVNLSCADPHAVAAWLTS-GVSDWSPGSALAGLEAELNNRDEKVQI 208
            MTR+EELAR +V   V T   LL PI   +        V AG  +++ A +  P+LE+LVNLSCADPHA+  WL S    D SPG AL GL+ ELN+  EK  +
Sbjct:    1 MTRVEELARSLVPGAVSTGVALLMPILARKPHS----TVAAGPVDSSMASSAFPVLELLVNLSCADPHAIYNWLASCSPDDGSPGGALKGLKIELNSGVEKAVV 100
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig116.1383.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDV3_ECTSI1.050e-1147.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig116contigL-elsbetiae_contig116:7168..10223 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig116.1383.1mRNA_L-elsbetiae_contig116.1383.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig116 7168..10223 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig116.1383.1 ID=prot_L-elsbetiae_contig116.1383.1|Name=mRNA_L-elsbetiae_contig116.1383.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=489bp
MNFLSRRSGGGGNSNSSEKLTATTLRGISSLCTCLVPATITGTGAEMANQ
EKLKTLAALKEVSGLILNEIVTTPTAKSGGGGGGGRGRQCWPPSLITLGL
EALAAMTRIEELARDVVLAVVPTKAVLLAPITELRGSGGSAGAVLAGRAE
AAGARNVPPLLEILVNLSCADPHAVAAWLTSGVSDWSPGSALAGLEAELN
NRDEKVQILAGLVLVNCFKGTKTTASGTGTAAASPPPHLHPSSNPPAPLD
EVIAHRVLPLFFRTLSVWSTLPSFAGWSGGGGDHGGHGRGEYASPVFPSS
PPHAAGSGSFAAVCGGYAAAVAAAVNASVGLRSWQQQREAVEYGAVDSLV
DLLGRARAEEREIAAAGLSACSESDSSSSATNGANASPSRPETAAAGVGA
IDVESSRSRDTRFIRAATQTGLNALATLCARCEAARERTVALGFHSTIRH
WLVVPPWRNGTGNPRPSCGGSGSGGDGGGGGGNESWRSR
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