prot_L-elsbetiae_contig5522.13809.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5522.13809.1
Unique Nameprot_L-elsbetiae_contig5522.13809.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length243
Homology
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BLAST of mRNA_L-elsbetiae_contig5522.13809.1 vs. uniprot
Match: D8LM49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM49_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 2.370e-56
Identity = 92/121 (76.03%), Postives = 105/121 (86.78%), Query Frame = 0 
Query:   57 SSVESSAITYVMTPRLVQKFVPPSPQYLTAVYRTLTSSFPEFSDRPIEICDYTGTKRAEGAHPGIQALPLEAFLLEVGLREEPSWTFPTVLAPLAARLAAAGIPTTDSLCEAATSGVLLSK 177
            + V SSAITY+M+  LVQ +VPPSPQYLTAVYRTLTSSFPEF DRP+EICDYTG KR++  +PG++ LPLEAFLLEVGLRE+P WTFPTVL PL  RLA+AG+ TTD LCEAATSGVLLSK
Sbjct:   31 NDVASSAITYIMSQHLVQTYVPPSPQYLTAVYRTLTSSFPEFLDRPLEICDYTGGKRSDWTYPGVRGLPLEAFLLEVGLREDPPWTFPTVLKPLTDRLASAGVTTTDELCEAATSGVLLSK 151
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5522.13809.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM49_ECTSI2.370e-5676.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5522contigL-elsbetiae_contig5522:6626..9450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5522.13809.1mRNA_L-elsbetiae_contig5522.13809.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5522 5744..10039 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5522.13809.1 ID=prot_L-elsbetiae_contig5522.13809.1|Name=mRNA_L-elsbetiae_contig5522.13809.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=243bp
MTPQEVEILDMYEHVKQGGYSKEAVKVSVRVAKGTAEDGENGDTATAGDG
TGVAAFSSVESSAITYVMTPRLVQKFVPPSPQYLTAVYRTLTSSFPEFSD
RPIEICDYTGTKRAEGAHPGIQALPLEAFLLEVGLREEPSWTFPTVLAPL
AARLAAAGIPTTDSLCEAATSGVLLSKLAAAAAAAETPAAATAVGQEGGE
EQPKELPKWEDTQRALQARATVPDFTEQTVDIIARIVSGRCS*
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