prot_L-elsbetiae_contig5520.13807.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5520.13807.1
Unique Nameprot_L-elsbetiae_contig5520.13807.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length300
Homology
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BLAST of mRNA_L-elsbetiae_contig5520.13807.1 vs. uniprot
Match: A0A6H5L8A9_9PHAE (HTTM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8A9_9PHAE)

HSP 1 Score: 412 bits (1059), Expect = 3.860e-135
Identity = 217/295 (73.56%), Postives = 243/295 (82.37%), Query Frame = 0 
Query:    9 RGAPKEGVPTTDSAGVKDAAAADPPLQLRAPRHGGYTAAVRRSGGREAQMLRGEPGYHLGLFRVAYGVLLVQRTLAFMSSGAVDASFGRGDSPASSPGSAAAALPPSVINFGHGFLLLGGDLGSPTADAVRSMCWCLCAAGAAISVGFRPNAVAFAAALMQLCLLLLEKSVYTDEAYLFALMGLLLSCTDCGKALGLDAPSLGEESDAGXXXXXXXXX----NQPPDTVPHWHTVLLRFQVCIVHIHRGLAKATTLDWLLGGQPLLHTLETMPPMQLARRVAEWASSSEIPGLGG 299
            RG  KEGV  +++ G +D   A P  QLRAPRHGG+  + + +GGREA MLRGEPGYHLGLFR+ YG+LLVQRTLAFMSSGAVDASF  G+SPASSPG  A   P +VINFGHGFLLLGG+LGSPTADAVR+ CWCLCAAGAAISVGFRPNA+AFAA+LMQL LLLLEKSVYTDEAYLFAL+GLLLSCTDCGK LGLDAP L E+  AG             +QPPDTVPHWH VL+RFQVCIVHIHRGLAKA+TLDWL+ GQPLLHT+E +PP  LARR AEWA++SEIPGLGG
Sbjct:    6 RGRSKEGVLASNAVGAQDKPEAAP--QLRAPRHGGWKGS-KSAGGREAHMLRGEPGYHLGLFRIGYGILLVQRTLAFMSSGAVDASFVTGESPASSPGGVA---PKNVINFGHGFLLLGGELGSPTADAVRTACWCLCAAGAAISVGFRPNAMAFAASLMQLFLLLLEKSVYTDEAYLFALIGLLLSCTDCGKTLGLDAPVLEEDGAAGNAVGGGGRGRETRSQPPDTVPHWHVVLVRFQVCIVHIHRGLAKASTLDWLIRGQPLLHTIEALPPAHLARRAAEWAAASEIPGLGG 294
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5520.13807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L8A9_9PHAE3.860e-13573.56HTTM domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007782Vitamin K-dependent gamma-carboxylasePFAMPF05090VKG_Carboxcoord: 141..271
e-value: 3.0E-15
score: 56.0
IPR007782Vitamin K-dependent gamma-carboxylasePANTHERPTHR12639VITAMIN K-DEPENDENT GAMMA-CARBOXYLASEcoord: 136..270
NoneNo IPR availablePANTHERPTHR12639:SF7coord: 136..270

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5520contigL-elsbetiae_contig5520:6517..9795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5520.13807.1mRNA_L-elsbetiae_contig5520.13807.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5520 6494..9795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5520.13807.1 ID=prot_L-elsbetiae_contig5520.13807.1|Name=mRNA_L-elsbetiae_contig5520.13807.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=300bp
MQQRRGPGRGAPKEGVPTTDSAGVKDAAAADPPLQLRAPRHGGYTAAVRR
SGGREAQMLRGEPGYHLGLFRVAYGVLLVQRTLAFMSSGAVDASFGRGDS
PASSPGSAAAALPPSVINFGHGFLLLGGDLGSPTADAVRSMCWCLCAAGA
AISVGFRPNAVAFAAALMQLCLLLLEKSVYTDEAYLFALMGLLLSCTDCG
KALGLDAPSLGEESDAGGGGGGAAARNQPPDTVPHWHTVLLRFQVCIVHI
HRGLAKATTLDWLLGGQPLLHTLETMPPMQLARRVAEWASSSEIPGLGGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007782VKG_COase