prot_L-elsbetiae_contig5515.13799.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5515.13799.1
Unique Nameprot_L-elsbetiae_contig5515.13799.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length211
Homology
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BLAST of mRNA_L-elsbetiae_contig5515.13799.1 vs. uniprot
Match: D8LTY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY9_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 9.980e-77
Identity = 144/228 (63.16%), Postives = 162/228 (71.05%), Query Frame = 0 
Query:    1 MKKEIAELQSGTTASLDRAIAAAEATTGIATQTSIQLKEQRQQMGEIDAEARGIDSKLKKTGYNLKHGLTWRGALTSPFRRNKPKAKDAG----TAGDISPVFKDDYTQ---PAAAPSDGSR-----SPKKRGSLFKGRAVEKSAPV-------VEAPKVPEHAPDGFEDQLDKLDGLLDGLNLQAKAIGAELKQQNDGIEVLGARVEPLRQETASQAKQIKRRFGVK 209
            MK EIAELQ+GTTASLDRAIAAAEAT  +  +T + LKEQR+QMGEIDAEAR ID  LK+TG+NLK+GLTWRGALT+PFRR             T GDISPVFKDD+ Q   P  AP+ G       SPKK G L  G   +K+            A K+PE+ P+GFE QLD LD LLDGL +QAK IGAELKQQN+GIEVLG RVEPLRQETA QAKQIKRRFGVK
Sbjct:   42 MKAEIAELQAGTTASLDRAIAAAEATASVGARTQVTLKEQREQMGEIDAEARAIDGTLKRTGHNLKYGLTWRGALTAPFRRKXXXXXXXXXXXITGGDISPVFKDDFRQSTPPGGAPAHGGSTSSTPSPKKGGRLKFGSPRKKAGAARAEEIGTKAASKLPENVPEGFETQLDTLDSLLDGLTVQAKEIGAELKQQNEGIEVLGERVEPLRQETAFQAKQIKRRFGVK 269
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5515.13799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTY9_ECTSI9.980e-7763.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.110coord: 1..68
e-value: 1.3E-8
score: 36.8
NoneNo IPR availableGENE3D1.20.5.110coord: 143..207
e-value: 4.0E-6
score: 28.7
NoneNo IPR availablePANTHERPTHR19305SYNAPTOSOMAL ASSOCIATED PROTEINcoord: 2..204
NoneNo IPR availablePANTHERPTHR19305:SF9SYNAPTOSOMAL-ASSOCIATED PROTEIN 29coord: 2..204
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 2..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5515contigL-elsbetiae_contig5515:4203..4835 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5515.13799.1mRNA_L-elsbetiae_contig5515.13799.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5515 4203..4862 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5515.13799.1 ID=prot_L-elsbetiae_contig5515.13799.1|Name=mRNA_L-elsbetiae_contig5515.13799.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp
MKKEIAELQSGTTASLDRAIAAAEATTGIATQTSIQLKEQRQQMGEIDAE
ARGIDSKLKKTGYNLKHGLTWRGALTSPFRRNKPKAKDAGTAGDISPVFK
DDYTQPAAAPSDGSRSPKKRGSLFKGRAVEKSAPVVEAPKVPEHAPDGFE
DQLDKLDGLLDGLNLQAKAIGAELKQQNDGIEVLGARVEPLRQETASQAK
QIKRRFGVKG*
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