mRNA_L-elsbetiae_contig5507.13782.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig5507.13782.1
Unique NamemRNA_L-elsbetiae_contig5507.13782.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig5507.13782.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI)

HSP 1 Score: 576 bits (1485), Expect = 3.920e-199
Identity = 340/503 (67.59%), Postives = 380/503 (75.55%), Query Frame = 1
Query:    1 MARSATPD--AARLLQSVRQRNEAGVEKALAAGCSIDGSSEQDWRPIIAAAASGKVSMTEFLIEKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYHLDVFRALLKAGANPDSANGKGLTPLMLTCILEDPGRGEERAIMAHELLEAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPATLNRATPDGLTPLYAAAMSGKDEAVSHLLSAGAQQPPASAEKDMCPLVAAVRENHRKVVEVLLSDRGMEAIGGSEAIPRAVGAAAAARKGRAGIVQMLISAEGEEREKHWARCCFKDDPVLHCAVSFGNISAARVLLAAGADETAENEEGRWAREVIGFNAPSLQRDPGKKGTIVRMLERGPAFRARSFAWPPGPGXXXXXXXXXXXAHCAGDAXXXXXXADDTCANDACTSGXAGDTCAAGDGGXXXISXXXXXXXXXACAGGDGD-ACACGDGRGDAAAVE------ACTGGDSSITPLGVRIYRTKNK-AFLV 1479
            MARSAT    AA+LL  +RQRNEAGVE+ LAAG S+DGSSE DWRPIIAAAAS KV M E LI++ A++DLGSL+DLRCSDGLEVLGKGVRALHVAINHY++DVFR LLKAGA+PDSANGKGLTPLMLTCILED  RGE+RA+MA E               KTALGFAAAR Q +LIDILL +AP TLNRATPDGLTPLYAAAMSGK +AVSHLLSAGA+QPPASAEKDMCPLVAAVRENH++VV VLL+DRGM+AIGG++ IPRAVGAAA+ARKGRA IV+ML+SAEG ERE HWARC +K+DPVLH AVSFGNISA RVLLAAGADETAENE+GR AREV+GFNAPSLQRDP KKG IVRMLERGPA+RARS+AWP               A  A  A   XXX     +ND C SG  G     G G    ++          CA  + D ACA GD  G  A+V+      A  GG SS  PLGVRIYR K + AFLV
Sbjct:  101 MARSATKPQLAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASCKVGMAELLIKRKADVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAWP---ATARAYTAGHTCAAAATTAAPGXXXXXXXSSNDVCGSGFVG-----GSGDACAVARPRGHEPGDGCAVREADGACANGDDCGGGASVDNGTDLPAAHGGGSSA-PLGVRIYRPKKRNAFLV 594          
BLAST of mRNA_L-elsbetiae_contig5507.13782.1 vs. uniprot
Match: A0A6H5JSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC7_9PHAE)

HSP 1 Score: 569 bits (1466), Expect = 3.740e-196
Identity = 336/502 (66.93%), Postives = 372/502 (74.10%), Query Frame = 1
Query:    1 MARSATPD--AARLLQSVRQRNEAGVEKALAAGCSIDGSSEQDWRPIIAAAASGKVSMTEFLIEKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYHLDVFRALLKAGANPDSANGKGLTPLMLTCILEDPGRGEERAIMAHELLEAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPATLNRATPDGLTPLYAAAMSGKDEAVSHLLSAGAQQPPASAEKDMCPLVAAVRENHRKVVEVLLSDRGMEAIGGSEAIPRAVGAAAAARKGRAGIVQMLISAEGEEREKHWARCCFKDDPVLHCAVSFGNISAARVLLAAGADETAENEEGRWAREVIGFNAPSLQRDPGKKGTIVRMLERGPAFRARSFAWPPGPGXXXXXXXXXXXAHCAGDAXXXXXXADDTCANDACTSGXAGDTCA-AGDGGXXXISXXXXXXXXXACAGGDGDACACGDGRGDAAAVEACTG-----GDSSITPLGVRIYRTKNK-AFLV 1479
            MARS T    AA+LL  +RQRNEAGVE+ LAAG S+DGSSE DWRPIIAAAASG V M + LI++ AN+DLGSL+DLRCSDGLEVLGKGVRALHVAINHYH+DVFR LLKAGA+PDSANGKGLTPLMLTCILED  RGE+RA+MA E               KTALGFAAAR Q DLIDILL +AP TLNRATPDGLTPLYAAAMSGK +AVSHLLSAGA+QPPASAEKDMCPLVAAVRENH++VV VLL+DRGMEAI G + IPRAVGAAA+ARKGRA IV+ML+SAEG ERE HWARC +K+DPVLHCAVSFGNISA RVLLAAGADETAENE+GR AREV+GFNAPSLQRDP KKG IVRML RGPA+RARS+AWP               A  A         A       +   G +GD CA A   G     XXXX     A A  +GD C      G  A+V+  T      G  S  PLGVRIYR K++ AFLV
Sbjct:  109 MARSVTKPQLAAQLLAYIRQRNEAGVERTLAAGASVDGSSELDWRPIIAAAASGSVGMADLLIKRQANVDLGSLNDLRCSDGLEVLGKGVRALHVAINHYHVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTDLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMEAIDGPDVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHCAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLARGPAYRARSWAWPATARAYTAGHTCAAAATTAAPGACGAAAASSDYVRGSSFVGGSGDACAVAPPRGGDAXXXXXXREADGARA--NGDTC------GGRASVDNGTDLPAAHGSGSSAPLGVRIYRPKSRNAFLV 602          
BLAST of mRNA_L-elsbetiae_contig5507.13782.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 6.710e-69
Identity = 158/376 (42.02%), Postives = 225/376 (59.84%), Query Frame = 1
Query:   34 LLQSVRQRNEAGVEKALAAGCSIDGS--SEQDWRPIIAAAASGKVSMTEFLIEKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYH---LDVFRALLKAGANPDSANGKGLTPLMLTCILEDPGRGEERAIMAHELLEAGADPALADFQGKTALGFAAARSQIDLIDILLLQAP-ATLNRATPDGLTPLYAAAMSGKDEAVSHLLSAGAQQPPASAEKDMCPLVAAVRENHRKVVEVLLSDRGMEAIGGSEAI-PRAVGAAAAARKGRAGIVQMLISAEGEEREKHWARC-CFKDDPVLHCAVSFGNISAARVLLAAGADETAENEEGRWAREVIGFNAPSLQRDPGKKGTIVRMLERGPAFRARSFAWPPG 1137
            LL  V+  N+ GVE+ LAAG SIDGS  S +++ P++ AAA G  SM +FL++KGA+++  +               G RA+HVA++  +   LD  R L+KAGA+ +  N +G TPLM+ C ++    G ER  +A ELL+AG D  L D  G+ AL +AA      LI  LL +   +TLN AT DG TPL  A        VS LLSAGA Q         CP  +A    +  ++ +L S+RGM+A+GG  A+ P ++  A A R+G+A I+++L++AEG+ER++HWAR       P+++ A ++G ++  +VLLAAGADET  + +G  A EVIG   PS   DP +   I R L+RGPA+RARS+AWP G
Sbjct:    9 LLVEVQNGNKRGVERYLAAGASIDGSPHSGEEFPPVVFAAAVGSASMIKFLVDKGADINSSTWRP-------GAFPSGSRAIHVAVSSGYAGALDALRELIKAGADLNGRNYQGCTPLMMACRVDK--EGAERVELARELLKAGVDTTLVDADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVEFVHCGVVSLLLSAGASQRGLQEGNYPCPFRSAAALGYESILRILCSERGMDAVGGGAAVLPNSL--ACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQLPSGTLDPLEAAAIGRELQRGPAYRARSWAWPVG 373          
BLAST of mRNA_L-elsbetiae_contig5507.13782.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 4.990e-64
Identity = 141/368 (38.32%), Postives = 212/368 (57.61%), Query Frame = 1
Query:   31 RLLQSVRQRNEAGVEKALAAGCSIDGSSEQDWRPIIAAAASGKVSMTEFLIEKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYHLDVFRALLKAGANPDSANGKGLTPLMLTCILEDPGRGEERAIMAHELLEAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPATLNRATPDGLTPLYAAAMSGKDEAVSHLLSAGAQQPPASAEKDMCPLVAAVRENHRKVVEVLLSDRGMEAIGGSEAIPRAVGAAAAARKGRAGIVQMLISAEGEEREKHWARCCFKDDPVLHCAVSFGNISAARVLLAAGADETAENEEGRWAREVIGFNA-PSLQRDPGKKGTIVRMLERGPAFRARSFAWP 1131
            RLL  V + N +GV+K LA G ++DGS E ++ PI+ AA +G  +M + LI KGA+L+  +               G RA+H AI+  +      LL+AGA+ +S +G G TPLMLT  L D G     A++A EL + GA P + +  G +A+  AA    ++++ ++L   P+ LN     G TP+  AA+ G+  AV HLLSAGA       ++    ++ A    H ++V ++L + G+  +GG  AIP ++G A   R+ +  I++ML+SAEGEE  + WA C  +D   LH A ++ ++ A  VLL+AGA ET  N  G+ A E +G    P  +R P K+  +VRML+RGPA+RARS+ WP
Sbjct:   10 RLLMEVEKGNLSGVKKLLAGGANVDGSRELEYPPIMGAARNGNAAMLKLLISKGADLETEAR-----------FPAGSRAIHAAISGENPTALSVLLEAGADFNSRDGAGETPLMLTA-LADTG-----ALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAILWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQAK--ILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWP 355          
BLAST of mRNA_L-elsbetiae_contig5507.13782.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 2.160e-51
Identity = 143/372 (38.44%), Postives = 202/372 (54.30%), Query Frame = 1
Query:   31 RLLQSVRQRNEAGVEKALAAGCSIDGSSEQDWRPIIAAAASGKVSMTEFLIEKGANLD-LGSLDDLRCSDGLE---VLGKGVRALHVAINHYHLDVFRALLKAGANPDSANGKGLTPLMLTCILEDPGRGEERAIMAHELLEAGADPALADFQGK-TALGFAAARSQIDLIDILLLQAPATLNRATPDGLTPLYAAAMSGKDEAVSHLLSAGAQQPPASAEKDMCPLVAAVRENHRKVVEVLLSDRGMEAIGGSEAIPRAVGAAAAARKGRAGIVQMLISAEGEEREKHWARCCFKDD-PVLHCAVSFGNISAARVLLAAGADETAENEEGRWAREVIGFNAPSLQRDPGKKGTIVRMLERGPAFRARSFAW 1128
            RLL  V + +  G  + L AG + DG+SE    P+  AA  G++ + + LI+ GA+LD   SLD  + +DG         G   LH A+   +LD  R LL AGA+P+ A+GKG TPLM+TC+     R +   + A                   TAL  AA  +  DL+ +LL +AP+T+N     G+T L  AA  G + AVS LLSAGA+  P+     +  L+ AV   H +VV VLL DRG++A+GG  A+  A+  +   R  R  I+QML+  EGE++   WAR    D  P LH A +  ++ AA +LL AGADE   N   + A   +G   P+ +++P     + R+LERGPAFRARS+AW
Sbjct:    9 RLLHHVEKGSLQGAIEMLKAGANADGTSEAATSPLFLAANRGRIDILKLLIDNGADLDGTSSLD--KFADGFTGNLPFEGGTTPLHGALAGENLDALRLLLLAGADPNLADGKGCTPLMMTCLKYF--RAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGSLLIAVELGHEQVVRVLL-DRGVQAVGGELAMSYALRRSILKRFPR--ILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGAALPANKKNPDTSAAVCRLLERGPAFRARSWAW 373          
BLAST of mRNA_L-elsbetiae_contig5507.13782.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 9.290e-51
Identity = 121/328 (36.89%), Postives = 183/328 (55.79%), Query Frame = 1
Query:  151 SGKVSMTEFLIEKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYHLDVFRALLKAGANPDSANGKGLTPLMLTCILEDPGRGEERAIMAHELLEAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPATLNRATPDGLTPLYAAAMSGKDEAVSHLLSAGAQQPPASAEKDMCPLVAAVRENHRKVVEVLLSDRGMEAIGGSEAIPRAVGAAAAARKGRAGIVQMLISAEGEEREKHWARCCFKDDPVLHCAVSFGNISAARVLLAAGADETAENEEGRWAREVIGFN-APSLQRDPGKKGTIVRMLERGPAFRARSFAWP 1131
            +G  +M + LI KGANL+  +               G RA+H AI+  +      LL+AGA+ +S +G G TPLMLT  L D G     A++A EL + GA P + +  G +A+  AA    ++++ ++L   P+ LN     G TP+  AA+ G+  AV HLLSAGA       ++    +  A    H ++V ++L + G+  +GG  AIP ++G A   R+ +  I++ML+SAEGE+  + WA C  +D   LH A ++ ++    VLL+AGA ET  N  G+ A E +G    P  +R P K+  +VRML+RGPA+RARS+ WP
Sbjct:  105 NGNTAMLKLLISKGANLETEAR-----------FPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAGETPLMLTA-LADTG-----ALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASD--LGVDEQNAAIFWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQAK--ILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWP 410          
BLAST of mRNA_L-elsbetiae_contig5507.13782.1 vs. uniprot
Match: A0A6H5L2Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q3_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 7.840e-43
Identity = 132/380 (34.74%), Postives = 207/380 (54.47%), Query Frame = 1
Query:   31 RLLQSVRQRNEAGVEKALAAGCSIDGSSEQDWRPIIAAAASGKVSMTEFLIEKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYHLDVFRALLKAGANPDSANGKGLTPLMLTCILEDPGRGEERAIMAHELLEAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPATLNRATPDGL-----TPLYAAAMSGKDEAVSHLLSAGAQQPPASAEKDMCP--LVAAVRENHRKVVEVLLSDRGMEAIGGSEAI-PRAVGAAAAARKGRAGIVQMLISA-EGEEREKHWARCCFKDDPVLHCAVSFGNISAARVLLAAGADETAENEEGRWAREVIGFNAPSLQRDPG---KKGTIVRMLERGPAFRARSFAWPP 1134
            RLL+  ++ +   V+ A+AAG    GSS    RP++ A+ SG V +  FL++ GA ++  +  D    D    LG  +RA H A+    LD    LLKAGA  D+ N +G T LM  C+ +          MA  LL+AGADP + D +G+ AL  AAA+   ++ID+LL    ++L++     +     TPL +A  S + +AV+HLLS GA+   A+ +++     L  AV +N   +V VL  + G+E++GG+  + P ++  A+AA+ GR  ++++L++   G+    +WA       P+L+ A  +  +    VLLAAGADE   ++E + A ++IG    S  +       K  I R L RGPA+RARS+ WPP
Sbjct:    9 RLLRGAQKGDLPAVQAAIAAGADPSGSSNSRLRPLMVASGSGSVEVVNFLLQNGAEMEHQTWGD----DDHRFLG--MRATHWAVTSGKLDTLLVLLKAGAVYDAVNAQGETCLMNACMTD--ASPPTCVAMAKALLDAGADPLIEDREGQVALHHAAAQGNPNMIDLLLQAKGSSLSKKLLSHVSRWEHTPLQSALESNQVQAVAHLLSLGAR---ATVDREGRGNLLRRAVVKNSEPIVRVLF-EAGLESVGGAARVMPDSL--ASAAKAGRTRLLKLLLTVGRGDRTTGYWANYYVWGGPLLNVAAGYATVDCVGVLLAAGADERVPDDERQTAGDMIGDLLASGSKSASFRSDKAAIRRTLLRGPAYRARSWTWPP 374          
BLAST of mRNA_L-elsbetiae_contig5507.13782.1 vs. uniprot
Match: D7FLL0_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL0_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 3.900e-35
Identity = 116/350 (33.14%), Postives = 178/350 (50.86%), Query Frame = 1
Query:  142 AAASGKVSMTEFLIEKGANLDLGSLDDL-----RCSDGLEVLGKGVRALHVAINHYH-LDVFRALLKAGANPDSANGKGLTPLMLTCILEDPGRGEERAIMAHELLEAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPATLNRATPDGLTPLYAAAMSGKDEAVSHLLSAGAQQPPASAEKDMCPLVAAVRENHRKVVEVLLSDRGMEAIGGSEAIPRAVGAAAAARKGRAGIVQMLISAEGEEREKHWARCCFK-DDPVLHCAVSFGNISAARVLLAAGADETAENEEGRWAREVIGF-------------NAPSLQRDPGKKGTIVRMLERGPAFRARSFAWP 1131
            AA   +  + + LIE+GA+++ G  +       R  +   +  +G  A H AI     +D+   LL+AGA+P + N  G+TPLM     E PG   E A+    L++AG +P   D +G TA   A      + I  +L  +PA L R   DG++ LY A   G    VS LLS GA+ P  +  +D CPL  A+ + H  +V++LL++  + A+GG E +   +    A  + R  I++M+++  GEE    WA   +     +LH +  +   ++   LLAAGA+E A ++ G+   +VIG                P+  RDP K+  I R +ER PAFRARS+AWP
Sbjct:    2 AAVHAQTEIAQLLIERGAHVNAGVTNPSMGTRERVVNSTFLPMQGENAFHAAICFAKKMDLVDLLLRAGADPSAGNKLGITPLMCLAREEPPGPWLECALEV--LIKAGVNPDQVDAEGWTAFLHAVEVGNPEKIRRILALSPAALGRIAWDGMSALYVACNEGHLSVVSCLLSLGAKHPRTTI-RDHCPLAVAIIKGHEDIVKILLAN--LSAVGGVE-LAAEMALTCAITQSRGKILRMMLNITGEENAARWADSDWGLAGSLLHYSCGYILPASVSALLAAGANENATDQAGQRPIDVIGTMDLQNPPLSPLHPRTPTRFRDPVKEAEIRRTVERAPAFRARSWAWP 345          
BLAST of mRNA_L-elsbetiae_contig5507.13782.1 vs. uniprot
Match: D8LMB2_ECTSI (Ankyrin repeat-containing protein 10_01 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB2_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 1.300e-31
Identity = 100/275 (36.36%), Postives = 146/275 (53.09%), Query Frame = 1
Query:  370 LMLTCILEDPGRGEERAIMAHELLEAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPATLNRATPDGLTPLYAAAMSGKDEAVSHLLSAGAQQPPASAEKDMCPLVAAVRENHRKVVEVLLSDRGMEAIGGSEAIPRAVGAAAAARKGRAGIVQMLISAEGEEREKHWAR--CCFKDD-------------------PVLHCAVSFGNISAARVLLAAGADETAENEEGRWAREVIGFNAPSLQRDPGKKGTIVRMLERGPAFRARSFAWP 1131
            +M+ C  E       +  M H LL AGA PAL    G  A+ FAAAR +  ++++LL +AP+TLN A   G +PL AAA+ G++  +S LLSAGA      A K +  L  A+       V  LL + G+EA+GG  AI  A+  A +   G   I++ML++ EG E+++ WA     F  D                   P+LH A  + +I A R+LL+AGAD    + +G+ A + IG   P  +R+   +  + +ML++GPAFR RS AWP
Sbjct:    1 MMVAC--ESSSGTSTKLEMLHSLLRAGAAPALEIELGALAIHFAAARCETQVVELLLSKAPSTLNNADNHGYSPLGAAALQGRESTLSLLLSAGASDRIVWATKGVSALHEAIGIGKGNSVRFLL-ENGLEAVGGLPAIAGAM--AVSVWYGYIDILEMLLNVEGGEKQEVWANQHVYFAHDGSLLRGVPGPTMATKFEWLPILHYAAKYCSIPALRILLSAGADTETCDLKGKLAVDHIGSLLPDDKRNGSMEAAVQQMLQKGPAFRVRSRAWP 270          
BLAST of mRNA_L-elsbetiae_contig5507.13782.1 vs. uniprot
Match: D8LMA6_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA6_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 1.400e-26
Identity = 114/390 (29.23%), Postives = 176/390 (45.13%), Query Frame = 1
Query:   70 VEKALAAGCSIDGSSEQDWRPIIAAAASGKVSMTEFLIEKGANLDLGSLDDLRCSDGLEVLGK-------GVRALHVAINHYHLDVFRALLKAGANPDSANGKGLTPLMLTCILEDPGRGE--ERAIMAHELLEAGADPALADFQGKTALGFAAARSQIDLIDILLLQAPATLNRATPDGLTPLYAAAMSGKDEAVSHLLSAGAQQPPASAEKDMCPLVAAVRENHRKVVEVLLSDRGMEAIGGSEAIPRAVGAAAAARKGRAGIVQMLISAEGEEREKHWAR---CCFKDD------------------------PVLHCAVSFGNISAARVLLAAGADETAENEEGRWAREVIGFNAPSLQRDPGKKGTIVRMLERGPAFRARSFAWP 1131
            V + LAAG S+  S E++  P+  AAA G V + + L+  GA ++      ++ SDG             G  ALH+A     +     LL+ GANP+S++ +G+TP+M+ C      R     +A M + LL+AGAD  L D  G  A+ FAA+  +  ++++LL +AP+TLN AT  G TPL AA                                                  G EA+GG  AI  A+    + + G   ++ +L++ EG+E+++ WA     C  +                         P+LH A  +  I A RVLL+AGA     + +G+ A + IG      +R+   +  +  +L +GPAFRARS+AWP
Sbjct:   23 VTRMLAAGASLRASREENIHPMAVAAAHGHVHIIKALVRSGAEIEATCTSRVK-SDGYCCETNPNWPYLNGFTALHIAAILGKVRAMLVLLQLGANPNSSDTRGVTPVMMACQGVRCCRPSTPNQAEMLNSLLKAGADVELEDGTGLLAIHFAASHCETQVVELLLSKAPSTLNHATHKGFTPL-AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGFEAVGGKPAIADAM--RTSVQYGHIDMLTILLNVEGDEKQEVWANQFVYCSHETVDVGLAPARDFPSTHAIMAIAFGCPLLHTAAKYCAIPAIRVLLSAGALAGKADYQGKVAEDAIGVY--HHERNGSVEAAVRALLLKGPAFRARSWAWP 406          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5507.13782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSK8_ECTSI3.920e-19967.59Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JSC7_9PHAE3.740e-19666.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSK4_ECTSI6.710e-6942.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JK53_9PHAE4.990e-6438.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDZ2_ECTSI2.160e-5138.44Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7G4M4_ECTSI9.290e-5136.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2Q3_9PHAE7.840e-4334.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLL0_ECTSI3.900e-3533.14Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LMB2_ECTSI1.300e-3136.36Ankyrin repeat-containing protein 10_01 n=1 Tax=Ec... [more]
D8LMA6_ECTSI1.400e-2629.23Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5507contigL-elsbetiae_contig5507:7972..9507 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score583.2
Seed ortholog evalue1.2e-163
Seed eggNOG ortholog2880.D8LSK8
KEGG koko:K10380
KEGG Pathwayko04624,ko05205,map04624,map05205
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-09_002000.1
Exons2
Model size1497
Cds size1497
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816579.3397179-CDS-L-elsbetiae_contig5507:7971..80401622816579.3397179-CDS-L-elsbetiae_contig5507:7971..8040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5507 7972..8040 -
1691683660.964867-CDS-L-elsbetiae_contig5507:7971..80401691683660.964867-CDS-L-elsbetiae_contig5507:7971..8040Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5507 7972..8040 -
1622816579.3496761-CDS-L-elsbetiae_contig5507:8079..95071622816579.3496761-CDS-L-elsbetiae_contig5507:8079..9507Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5507 8080..9507 -
1691683660.979132-CDS-L-elsbetiae_contig5507:8079..95071691683660.979132-CDS-L-elsbetiae_contig5507:8079..9507Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig5507 8080..9507 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5507.13782.1prot_L-elsbetiae_contig5507.13782.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig5507 7972..9507 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig5507.13782.1

>prot_L-elsbetiae_contig5507.13782.1 ID=prot_L-elsbetiae_contig5507.13782.1|Name=mRNA_L-elsbetiae_contig5507.13782.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=499bp
MARSATPDAARLLQSVRQRNEAGVEKALAAGCSIDGSSEQDWRPIIAAAA
SGKVSMTEFLIEKGANLDLGSLDDLRCSDGLEVLGKGVRALHVAINHYHL
DVFRALLKAGANPDSANGKGLTPLMLTCILEDPGRGEERAIMAHELLEAG
ADPALADFQGKTALGFAAARSQIDLIDILLLQAPATLNRATPDGLTPLYA
AAMSGKDEAVSHLLSAGAQQPPASAEKDMCPLVAAVRENHRKVVEVLLSD
RGMEAIGGSEAIPRAVGAAAAARKGRAGIVQMLISAEGEEREKHWARCCF
KDDPVLHCAVSFGNISAARVLLAAGADETAENEEGRWAREVIGFNAPSLQ
RDPGKKGTIVRMLERGPAFRARSFAWPPGPGGGGGAAAVVAAAHCAGDAG
AASDDADDTCANDACTSGDAGDTCAAGDGGGGGISAAGAAAAGGACAGGD
GDACACGDGRGDAAAVEACTGGDSSITPLGVRIYRTKNKAFLVKGFSR*
back to top

mRNA from alignment at L-elsbetiae_contig5507:7972..9507-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig5507.13782.1 ID=mRNA_L-elsbetiae_contig5507.13782.1|Name=mRNA_L-elsbetiae_contig5507.13782.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1536bp|location=Sequence derived from alignment at L-elsbetiae_contig5507:7972..9507- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCCGCTCGGCCACCCCCGACGCTGCTCGGCTCCTGCAGAGCGTACG CCAGCGCAACGAGGCAGGCGTGGAGAAAGCACTAGCAGCCGGGTGCTCGA TCGACGGCTCCAGCGAACAGGATTGGCGACCAATCATCGCTGCTGCTGCT TCCGGGAAGGTCAGCATGACCGAGTTTCTGATAGAGAAGGGGGCCAACCT GGACCTTGGATCTCTCGACGACTTGCGTTGTTCGGATGGGCTCGAGGTGC TTGGTAAAGGGGTGCGAGCCCTGCATGTAGCCATCAACCACTACCACCTG GACGTGTTCCGCGCGCTGCTCAAGGCTGGCGCGAACCCCGACTCGGCCAA TGGAAAAGGACTCACCCCGCTGATGCTGACCTGTATACTCGAAGACCCGG GGCGGGGAGAGGAGCGCGCCATCATGGCCCACGAGTTGCTGGAGGCTGGG GCAGACCCCGCCTTGGCGGACTTCCAAGGCAAGACGGCCCTCGGCTTCGC AGCGGCGCGCAGCCAGATAGACCTGATCGACATCCTCTTGCTCCAGGCGC CGGCGACGTTGAACCGCGCTACTCCGGACGGCCTCACGCCGCTGTACGCC GCAGCCATGAGCGGCAAGGACGAGGCCGTCTCCCACCTGCTGTCGGCGGG AGCCCAGCAGCCGCCGGCGTCGGCGGAGAAGGACATGTGCCCGCTCGTCG CGGCGGTGCGTGAGAACCACCGAAAAGTGGTGGAGGTCCTCCTCTCCGAC AGGGGCATGGAGGCGATCGGGGGGTCCGAAGCCATCCCCCGGGCGGTGGG CGCCGCCGCGGCTGCGCGGAAGGGGAGGGCGGGCATCGTGCAGATGCTTA TTTCGGCCGAGGGGGAGGAGAGAGAGAAGCACTGGGCCAGGTGTTGCTTC AAGGATGATCCCGTGCTTCACTGCGCCGTGTCGTTCGGCAACATCTCGGC GGCGCGAGTACTTCTCGCCGCCGGTGCAGACGAGACGGCCGAGAACGAAG AGGGGCGGTGGGCGAGGGAGGTCATCGGGTTCAACGCCCCCAGCCTTCAA CGGGATCCGGGGAAAAAGGGAACCATTGTGCGAATGCTGGAGAGGGGGCC CGCGTTCCGCGCTCGTTCGTTTGCGTGGCCTCCAGGGCCTGGTGGTGGTG GTGGTGCTGCTGCTGTTGTCGCTGCCGCTCACTGTGCTGGTGATGCCGGT GCTGCTAGTGACGACGCTGATGACACGTGTGCGAATGATGCCTGTACTTC TGGCGATGCTGGTGATACTTGTGCTGCGGGTGATGGCGGGGGGGGTGGGA TTTCTGCTGCCGGTGCTGCTGCTGCTGGAGGTGCATGCGCTGGTGGGGAC GGCGACGCTTGCGCTTGTGGGGATGGCAGGGGCGATGCTGCTGCGGTCGA GGCTTGTACTGGTGGGGACAGTAGCATCGTTAAGGAAGAGACCTTATCGC CTAGCAGAACAGCGAAGACTCCGCTGGGCGTGCGAATCTATCGGACAAAG AACAAGGCCTTTTTAGTCAAGGGTTTTAGCAGGTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig5507:7972..9507-

>mRNA_L-elsbetiae_contig5507.13782.1 ID=mRNA_L-elsbetiae_contig5507.13782.1|Name=mRNA_L-elsbetiae_contig5507.13782.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2994bp|location=Sequence derived from alignment at L-elsbetiae_contig5507:7972..9507- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCCGCTCGGCCACCCCCGACGCTGCTCGGCTCCTGCAGAGCGTACG
CCAGCGCAACGAGGCAGGCGTGGAGAAAGCACTAGCAGCCGGGTGCTCGA
TCGACGGCTCCAGCGAACAGGATTGGCGACCAATCATCGCTGCTGCTGCT
TCCGGGAAGGTCAGCATGACCGAGTTTCTGATAGAGAAGGGGGCCAACCT
GGACCTTGGATCTCTCGACGACTTGCGTTGTTCGGATGGGCTCGAGGTGC
TTGGTAAAGGGGTGCGAGCCCTGCATGTAGCCATCAACCACTACCACCTG
GACGTGTTCCGCGCGCTGCTCAAGGCTGGCGCGAACCCCGACTCGGCCAA
TGGAAAAGGACTCACCCCGCTGATGCTGACCTGTATACTCGAAGACCCGG
GGCGGGGAGAGGAGCGCGCCATCATGGCCCACGAGTTGCTGGAGGCTGGG
GCAGACCCCGCCTTGGCGGACTTCCAAGGCAAGACGGCCCTCGGCTTCGC
AGCGGCGCGCAGCCAGATAGACCTGATCGACATCCTCTTGCTCCAGGCGC
CGGCGACGTTGAACCGCGCTACTCCGGACGGCCTCACGCCGCTGTACGCC
GCAGCCATGAGCGGCAAGGACGAGGCCGTCTCCCACCTGCTGTCGGCGGG
AGCCCAGCAGCCGCCGGCGTCGGCGGAGAAGGACATGTGCCCGCTCGTCG
CGGCGGTGCGTGAGAACCACCGAAAAGTGGTGGAGGTCCTCCTCTCCGAC
AGGGGCATGGAGGCGATCGGGGGGTCCGAAGCCATCCCCCGGGCGGTGGG
CGCCGCCGCGGCTGCGCGGAAGGGGAGGGCGGGCATCGTGCAGATGCTTA
TTTCGGCCGAGGGGGAGGAGAGAGAGAAGCACTGGGCCAGGTGTTGCTTC
AAGGATGATCCCGTGCTTCACTGCGCCGTGTCGTTCGGCAACATCTCGGC
GGCGCGAGTACTTCTCGCCGCCGGTGCAGACGAGACGGCCGAGAACGAAG
AGGGGCGGTGGGCGAGGGAGGTCATCGGGTTCAACGCCCCCAGCCTTCAA
CGGGATCCGGGGAAAAAGGGAACCATTGTGCGAATGCTGGAGAGGGGGCC
CGCGTTCCGCGCTCGTTCGTTTGCGTGGCCTCCAGGGCCTGGTGGTGGTG
GTGGTGCTGCTGCTGTTGTCGCTGCCGCTCACTGTGCTGGTGATGCCGGT
GCTGCTAGTGACGACGCTGATGACACGTGTGCGAATGATGCCTGTACTTC
TGGCGATGCTGGTGATACTTGTGCTGCGGGTGATGGCGGGGGGGGTGGGA
TTTCTGCTGCCGGTGCTGCTGCTGCTGGAGGTGCATGCGCTGGTGGGGAC
GGCGACGCTTGCGCTTGTGGGGATGGCAGGGGCGATGCTGCTGCGGTCGA
GGCTTGTACTGGTGGGGACAGTAGCATCATGGCCCGCTCGGCCACCCCCG
ACGCTGCTCGGCTCCTGCAGAGCGTACGCCAGCGCAACGAGGCAGGCGTG
GAGAAAGCACTAGCAGCCGGGTGCTCGATCGACGGCTCCAGCGAACAGGA
TTGGCGACCAATCATCGCTGCTGCTGCTTCCGGGAAGGTCAGCATGACCG
AGTTTCTGATAGAGAAGGGGGCCAACCTGGACCTTGGATCTCTCGACGAC
TTGCGTTGTTCGGATGGGCTCGAGGTGCTTGGTAAAGGGGTGCGAGCCCT
GCATGTAGCCATCAACCACTACCACCTGGACGTGTTCCGCGCGCTGCTCA
AGGCTGGCGCGAACCCCGACTCGGCCAATGGAAAAGGACTCACCCCGCTG
ATGCTGACCTGTATACTCGAAGACCCGGGGCGGGGAGAGGAGCGCGCCAT
CATGGCCCACGAGTTGCTGGAGGCTGGGGCAGACCCCGCCTTGGCGGACT
TCCAAGGCAAGACGGCCCTCGGCTTCGCAGCGGCGCGCAGCCAGATAGAC
CTGATCGACATCCTCTTGCTCCAGGCGCCGGCGACGTTGAACCGCGCTAC
TCCGGACGGCCTCACGCCGCTGTACGCCGCAGCCATGAGCGGCAAGGACG
AGGCCGTCTCCCACCTGCTGTCGGCGGGAGCCCAGCAGCCGCCGGCGTCG
GCGGAGAAGGACATGTGCCCGCTCGTCGCGGCGGTGCGTGAGAACCACCG
AAAAGTGGTGGAGGTCCTCCTCTCCGACAGGGGCATGGAGGCGATCGGGG
GGTCCGAAGCCATCCCCCGGGCGGTGGGCGCCGCCGCGGCTGCGCGGAAG
GGGAGGGCGGGCATCGTGCAGATGCTTATTTCGGCCGAGGGGGAGGAGAG
AGAGAAGCACTGGGCCAGGTGTTGCTTCAAGGATGATCCCGTGCTTCACT
GCGCCGTGTCGTTCGGCAACATCTCGGCGGCGCGAGTACTTCTCGCCGCC
GGTGCAGACGAGACGGCCGAGAACGAAGAGGGGCGGTGGGCGAGGGAGGT
CATCGGGTTCAACGCCCCCAGCCTTCAACGGGATCCGGGGAAAAAGGGAA
CCATTGTGCGAATGCTGGAGAGGGGGCCCGCGTTCCGCGCTCGTTCGTTT
GCGTGGCCTCCAGGGCCTGGTGGTGGTGGTGGTGCTGCTGCTGTTGTCGC
TGCCGCTCACTGTGCTGGTGATGCCGGTGCTGCTAGTGACGACGCTGATG
ACACGTGTGCGAATGATGCCTGTACTTCTGGCGATGCTGGTGATACTTGT
GCTGCGGGTGATGGCGGGGGGGGTGGGATTTCTGCTGCCGGTGCTGCTGC
TGCTGGAGGTGCATGCGCTGGTGGGGACGGCGACGCTTGCGCTTGTGGGG
ATGGCAGGGGCGATGCTGCTGCGGTCGAGGCTTGTACTGGTGGGGACAGT
AGCATCACTCCGCTGGGCGTGCGAATCTATCGGACAAAGAACAAGGCCTT
TTTAGTCAAGGGTTTTAGCAGGTGAACTCCGCTGGGCGTGCGAATCTATC
GGACAAAGAACAAGGCCTTTTTAGTCAAGGGTTTTAGCAGGTGA
back to top