prot_L-elsbetiae_contig5497.13761.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5497.13761.1
Unique Nameprot_L-elsbetiae_contig5497.13761.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length271
Homology
BLAST of mRNA_L-elsbetiae_contig5497.13761.1 vs. uniprot
Match: A0A6H5K120_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K120_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 1.590e-112
Identity = 202/285 (70.88%), Postives = 219/285 (76.84%), Query Frame = 0
Query:    1 MTAAFL-SSPKTAPHVLVSPSSSHSPL-----------QRLQLPHAAMQRRKGGNAVV-HLTTRHRRQQVRGCEALAQDEELTVPRTLALEKNTAAVEARSSGLPSRRV-LSTPRLAAVAASALAAGLAVAVLAPGPAAAAVKAIVAGSEDEVHLHVGQKIANFFRQGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQK 271
            M  AFL SSPK AP     P SS+SPL           Q LQL H A +R  G  A V H+   H  +Q +G +A   +  +     L+    T  +E   +GLPSR+  L TPR AA+ ASALA GLAV+VLAPG A+AAVKAIVAGSEDE HLHVGQK+A FFR+GGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQK
Sbjct:   17 MATAFLASSPKVAPLFTTQPLSSYSPLRSLEQRAPRRQQSLQLSHEATKRATGRAATVAHVAPGHHSRQAQGRDAPEHERPVVASAGLS----TFEMETSPTGLPSRKKPLFTPRFAALTASALAVGLAVSVLAPGTASAAVKAIVAGSEDEAHLHVGQKVAKFFRRGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQK 297          
BLAST of mRNA_L-elsbetiae_contig5497.13761.1 vs. uniprot
Match: A0A835YGM4_9STRA (Putative small multi-drug export protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGM4_9STRA)

HSP 1 Score: 201 bits (511), Expect = 4.360e-61
Identity = 108/156 (69.23%), Postives = 122/156 (78.21%), Query Frame = 0
Query:  119 LAPGPAAAAVKAIVAGSE--DEVHLHVGQKIANFFRQ-GGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQK 271
            L P  A AAV+ + A +    E HLHVGQKIA + R  G LPDW T+  ISAMPVVELRGG+PVG+WMG+PIAKVFGLCVAGNM+PIP+ILLALRSS VQ + KP LDRAR KA  FGD + QA+AL LFVGIPLPGTGAWTGAM A +LGMP  K
Sbjct:    2 LQPERALAAVRVVTAAAAAAPEEHLHVGQKIAMYCRTTGNLPDWLTIALISAMPVVELRGGIPVGLWMGLPIAKVFGLCVAGNMVPIPLILLALRSSAVQNVLKPFLDRARSKAKEFGDAEKQAVALLLFVGIPLPGTGAWTGAMIASILGMPVAK 157          
BLAST of mRNA_L-elsbetiae_contig5497.13761.1 vs. uniprot
Match: A0A7S2Y2N1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2N1_9STRA)

HSP 1 Score: 186 bits (473), Expect = 8.840e-54
Identity = 94/147 (63.95%), Postives = 115/147 (78.23%), Query Frame = 0
Query:  125 AAAVKAIVAGSEDEVHLHVGQKIANFFRQGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQK 271
            A+A +A+      E HLH+GQKIAN FR+ GLPD   LM ISAMPVVELRGG+PVG WMG+P+  V  LCV GN+IPI  +L AL++  +QK+ KPVLDRA EK+ G G EK+++LA+ LFVGIPLPGTGAWTGAMGAFLLGM F++
Sbjct:  145 ASAAEALSTAVSAEEHLHLGQKIANQFRKTGLPDEVVLMIISAMPVVELRGGIPVGQWMGLPLLNVLALCVVGNLIPIIPLLAALKNKTIQKVMKPVLDRAAEKSKGLGSEKNRSLAVALFVGIPLPGTGAWTGAMGAFLLGMGFRE 291          
BLAST of mRNA_L-elsbetiae_contig5497.13761.1 vs. uniprot
Match: A0A6U3YD80_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YD80_9STRA)

HSP 1 Score: 172 bits (435), Expect = 6.320e-49
Identity = 88/136 (64.71%), Postives = 103/136 (75.74%), Query Frame = 0
Query:  134 GSEDEVHLHVGQKIANFFRQGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPF 269
            G   EV LH+GQK+A  F+  GL D   +  ISAMPVVELRG +PVG WMG+P+ KV GLC+ GNM+PI  IL  LR   VQ+L KPVLDRA+ KA+ F DE+S+A+ L  FVGIPLPGTGAWTGAMGAFLLGMPF
Sbjct:   83 GDSAEV-LHIGQKVARVFQGRGLSDEMVVCLISAMPVVELRGAIPVGAWMGLPLPKVLGLCIVGNMLPIAPILYLLRFGPVQRLLKPVLDRAQSKASAFKDERSRAMLLAAFVGIPLPGTGAWTGAMGAFLLGMPF 217          
BLAST of mRNA_L-elsbetiae_contig5497.13761.1 vs. uniprot
Match: A0A7S1UT50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UT50_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.650e-47
Identity = 87/132 (65.91%), Postives = 100/132 (75.76%), Query Frame = 0
Query:  140 HLHVGQKIANFFRQGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAA--GFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPF 269
            HLHVGQKIAN+FR  GLPD   L  ISA+PVVELRG VPVG+WMG+PI  V   CV GNMIPI  ILL LR+  ++KL +P+L RA +K+A  G G  + Q  +L  FVGIPLPGTGAWTGAMGAFLLGMPF
Sbjct:   65 HLHVGQKIANYFRSFGLPDTVILAIISALPVVELRGAVPVGVWMGLPITTVLPACVFGNMIPIVPILLLLRNERLKKLMEPILSRAEKKSASLGVGSPEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMPF 196          
BLAST of mRNA_L-elsbetiae_contig5497.13761.1 vs. uniprot
Match: A0A7S0IW87_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IW87_9EUKA)

HSP 1 Score: 168 bits (425), Expect = 3.810e-47
Identity = 88/140 (62.86%), Postives = 104/140 (74.29%), Query Frame = 0
Query:  130 AIVAGSEDEVHLHVGQKIANFFRQGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPF 269
            A+   S    HLH+GQK+A FF+Q GLP+WA LM ISA P VELRGGVPVG WMG+  A  F +CV GNM+PI   LLALRS+FV+KLA P+L RA +K AG    +S+ LAL LFVGIP PGTGAWTGA+ A+LL MPF
Sbjct:  103 ALALASGGAEHLHLGQKVALFFQQTGLPNWAVLMLISATPAVELRGGVPVGNWMGISPAATFLICVLGNMLPIAPTLLALRSAFVKKLAAPLLTRAEKKLAGLPKGQSRTLALALFVGIPAPGTGAWTGAIIAYLLDMPF 242          
BLAST of mRNA_L-elsbetiae_contig5497.13761.1 vs. uniprot
Match: A0A6S8U4Q8_9STRA (Ferredoxin--NADP(+) reductase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8U4Q8_9STRA)

HSP 1 Score: 172 bits (437), Expect = 5.560e-46
Identity = 94/153 (61.44%), Postives = 109/153 (71.24%), Query Frame = 0
Query:  123 PAAAAVK--AIVAGSEDEVHLHVGQKIANFFRQGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREK--AAGFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMPFQK 271
            PAA A K  AI A  E   HLH GQK+ANFFR  G+PD A L  ISAMPV+ELRG VPVGIWMG+PI KV   CV GNM+PI  +L  L++  ++KL KP+LDRA +K  A G G  + Q  +L  FVGIPLPGTGAWTGAMGAFLLGMP  +
Sbjct:  116 PAALAAKSSAIAAAPEVVEHLHTGQKVANFFRSFGIPDLAILSIISAMPVIELRGAVPVGIWMGLPITKVLPACVFGNMVPIIPLLFLLKNETLKKLMKPILDRAEKKSSALGVGSPEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMPTAR 268          
BLAST of mRNA_L-elsbetiae_contig5497.13761.1 vs. uniprot
Match: A0A1E7FFY0_9STRA (Ferredoxin--NADP(+) reductase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFY0_9STRA)

HSP 1 Score: 172 bits (435), Expect = 7.460e-46
Identity = 102/191 (53.40%), Postives = 122/191 (63.87%), Query Frame = 0
Query:   80 NTAAVEARSSGLPSRRVLSTPRLAAVAASALAAGLAVAVLAPGPAAAAVKAIVAGSEDEVHLHVGQKIANFFRQGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFG--DEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMP 268
            N     A+S  L   + L T  +A V  S L            PA AA KA+V   E   HLH GQKIANFF   GLP WA L TISAMPVVELRG +PVG+WMG+PI +V   CV GNMIPI  +L  L++  ++KL  P+L+RA +KAAG G    + Q ++L  FVGIPLPGTGAWTGAMG+FLLGMP
Sbjct:   83 NNERANAKSKTLSMSKFLKTSAMALVTLSLL----------TSPAFAAKKAVV---ETVEHLHTGQKIANFFMSFGLPKWAVLATISAMPVVELRGAIPVGVWMGLPIQQVLLTCVIGNMIPIVPLLFLLKNPSLKKLMSPILNRAEKKAAGLGVGSLEKQWVSLAAFVGIPLPGTGAWTGAMGSFLLGMP 260          
BLAST of mRNA_L-elsbetiae_contig5497.13761.1 vs. uniprot
Match: A0A7S4AR77_9STRA (Ferredoxin--NADP(+) reductase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A7S4AR77_9STRA)

HSP 1 Score: 171 bits (434), Expect = 9.510e-46
Identity = 92/152 (60.53%), Postives = 110/152 (72.37%), Query Frame = 0
Query:  119 LAPGPAAAAVKAIVAGSEDEVHLHVGQKIANFFRQGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAAGFG--DEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMP 268
            L   PA AA  A+ A   +  HLH GQKIANFF   GLP WA L  ISAMPVVELRG +PVG+WMG+PI +VF +CV GNM+PI  +L  L++  ++KL  P+L RA +K+AG G  D K Q ++L  FVGIPLPGTGAWTGAMGAFLLGMP
Sbjct:  105 LTSSPAFAAKTAVAADPVE--HLHTGQKIANFFINFGLPKWAVLSVISAMPVVELRGAIPVGVWMGLPIEQVFPICVLGNMVPIVPLLFLLKNPTLKKLMGPILRRAEKKSAGLGGGDVKKQWVSLAAFVGIPLPGTGAWTGAMGAFLLGMP 254          
BLAST of mRNA_L-elsbetiae_contig5497.13761.1 vs. uniprot
Match: A0A7S1ZZ20_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ20_TRICV)

HSP 1 Score: 161 bits (408), Expect = 9.830e-46
Identity = 81/131 (61.83%), Postives = 98/131 (74.81%), Query Frame = 0
Query:  140 HLHVGQKIANFFRQGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMIPIPIILLALRSSFVQKLAKPVLDRAREKAA--GFGDEKSQALALTLFVGIPLPGTGAWTGAMGAFLLGMP 268
            HLHVGQK+AN+FR  GLPD A L  ISAMPV+ELRG VPVG+WMG+P+  V   CV GNM+PI  ++  LR+  ++KL  P+L RA +K+A  G G  + Q  +L  FVGIPLPGTGAWTGAMGAFLLGMP
Sbjct:   24 HLHVGQKVANYFRTFGLPDTAILALISAMPVIELRGAVPVGLWMGLPLTTVLPACVMGNMVPIVPLMFLLRNEKLKKLMSPILSRAEKKSASLGVGSLEKQWASLAAFVGIPLPGTGAWTGAMGAFLLGMP 154          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5497.13761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K120_9PHAE1.590e-11270.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YGM4_9STRA4.360e-6169.23Putative small multi-drug export protein-domain-co... [more]
A0A7S2Y2N1_9STRA8.840e-5463.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U3YD80_9STRA6.320e-4964.71Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1UT50_9STRA2.650e-4765.91Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S0IW87_9EUKA3.810e-4762.86Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]
A0A6S8U4Q8_9STRA5.560e-4661.44Ferredoxin--NADP(+) reductase n=2 Tax=Chaetoceros ... [more]
A0A1E7FFY0_9STRA7.460e-4653.40Ferredoxin--NADP(+) reductase n=1 Tax=Fragilariops... [more]
A0A7S4AR77_9STRA9.510e-4660.53Ferredoxin--NADP(+) reductase n=2 Tax=Pseudo-nitzs... [more]
A0A7S1ZZ20_TRICV9.830e-4661.83Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009577Putative small multi-drug exportPFAMPF06695Sm_multidrug_excoord: 172..271
e-value: 9.9E-29
score: 100.4
IPR009577Putative small multi-drug exportPANTHERPTHR36007FAMILY NOT NAMEDcoord: 82..269
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..209
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 210..271
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..101
NoneNo IPR availableTMHMMTMhelixcoord: 244..266
NoneNo IPR availableTMHMMTMhelixcoord: 187..209
NoneNo IPR availableTMHMMTMhelixcoord: 102..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5497contigL-elsbetiae_contig5497:11310..12122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5497.13761.1mRNA_L-elsbetiae_contig5497.13761.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5497 11310..12122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5497.13761.1 ID=prot_L-elsbetiae_contig5497.13761.1|Name=mRNA_L-elsbetiae_contig5497.13761.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=271bp
MTAAFLSSPKTAPHVLVSPSSSHSPLQRLQLPHAAMQRRKGGNAVVHLTT
RHRRQQVRGCEALAQDEELTVPRTLALEKNTAAVEARSSGLPSRRVLSTP
RLAAVAASALAAGLAVAVLAPGPAAAAVKAIVAGSEDEVHLHVGQKIANF
FRQGGLPDWATLMTISAMPVVELRGGVPVGIWMGMPIAKVFGLCVAGNMI
PIPIILLALRSSFVQKLAKPVLDRAREKAAGFGDEKSQALALTLFVGIPL
PGTGAWTGAMGAFLLGMPFQK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009577Sm_multidrug_ex