prot_L-elsbetiae_contig5490.13753.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5490.13753.1
Unique Nameprot_L-elsbetiae_contig5490.13753.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length166
Homology
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BLAST of mRNA_L-elsbetiae_contig5490.13753.1 vs. uniprot
Match: D7FZK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZK1_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.740e-16
Identity = 67/118 (56.78%), Postives = 78/118 (66.10%), Query Frame = 0 
Query:   27 SKEDARRRKLQEWQESKAS--GKRTPAPERKTVPDRKAQFFERRERRLEEEKKKRMSRPGGRENSISTPTPTTYSRSKMTPSATTSRLLSTPRGGPAPDPHPHGQ--LTGTTPVSAVR 140
            SKE+ RR KLQ+W+ESKA+   K TPA ERK  PDRKAQFFERRERRL+EE++KR SR  G+EN++    P   +  K   S  T RL STPR G A D    GQ  LT TTP SA R
Sbjct:   16 SKEEDRRLKLQQWKESKAALEKKVTPA-ERKAAPDRKAQFFERRERRLQEEREKRASR-SGKENNM----PPAEASRKAAGSDQTHRLSSTPRPGAASD----GQVKLTETTPASAAR 123
[Close]
BLAST of mRNA_L-elsbetiae_contig5490.13753.1 vs. uniprot
Match: A0A6H5JIX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIX2_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.040e-6
Identity = 50/97 (51.55%), Postives = 58/97 (59.79%), Query Frame = 0 
Query:   27 SKEDARRRKLQEWQESKAS--GKRTPAPERKTVPDRKAQFFERRERRLEEEKKKRMSRPGGRENSISTPTPTTYSRSKMTPSATTSRLLSTPRGGPA 121
            SKE+ RR KLQ+W+ESKA+   K TPA ERK  PDRKAQFFERRER          SR  G+EN++    P   +  K   S  T RL STPR  PA
Sbjct:   16 SKEEDRRLKLQQWKESKAALEKKVTPA-ERKAAPDRKAQFFERRERXXXXXXXXXXSR-SGKENNM----PPVEASRKAAGSDQTQRLSSTPRPRPA 106
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5490.13753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZK1_ECTSI1.740e-1656.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIX2_9PHAE4.040e-651.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5490contigL-elsbetiae_contig5490:2928..6587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5490.13753.1mRNA_L-elsbetiae_contig5490.13753.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5490 2928..6587 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5490.13753.1 ID=prot_L-elsbetiae_contig5490.13753.1|Name=mRNA_L-elsbetiae_contig5490.13753.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp
MSTLSNEAGAAAVAVMTDVSITASARSKEDARRRKLQEWQESKASGKRTP
APERKTVPDRKAQFFERRERRLEEEKKKRMSRPGGRENSISTPTPTTYSR
SKMTPSATTSRLLSTPRGGPAPDPHPHGQLTGTTPVSAVRGALPRPRQAA
TTSSSVAKTPSSHHTA
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