mRNA_L-elsbetiae_contig5489.13751.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig5489.13751.1 vs. uniprot
Match: D7FYW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW7_ECTSI) HSP 1 Score: 356 bits (914), Expect = 2.090e-115 Identity = 250/371 (67.39%), Postives = 286/371 (77.09%), Query Frame = 2 Query: 2 IQLQPSVLVDRDLRPKDLDA-PSVTEATHLQERCVDIATELFELKTRFDHQERELKIAKREXXXXXXXXXXXXXXXXXXXXXXXXXXRRVNTLEEDSSKLAEDNAELRLDRDRLLRVVRRHKEAGRADSVAAHRDRIRKRNMSEKEVNRCDLASAKLELKAMGQENNRLLSKARRQAGRIRELEDNAGVLTATLSQAEQELDVVRKEKADVQRESDEATASERRAKSDMEHEALLRLEAIERVNSARTAEGEAREARASAEMLAESLRIQLAKTAEKLEAKDSARARHQGSVARYQNMIDAQALALQTVRQQLLGEKVRRQESERQARLRHIAAIDSKSRAFASTTTGAAGARAGGTK---GSPTARRTAT 1102 I+LQP+++VDRDLR DLDA PSVTEA HLQERCVD+ATELFELKTRFD XXXXXXXXXXXXXXXXXXXX RRV TLEE++SKLA DNA+LRLDR+RLL VVRR+K+AGR +SVAAHRDR+RKR+MSEKEVNRCDLASAKL LKAMGQEN RLLSKA+ QA RIRELE+ VL LS+ E EL+ +K VQ+ESD+A A E+RAKSDMEHEALLRL+A+E+ +SA E + E+LR++L T +KLEAKDSARARHQGSV RYQ MID+QA+ALQ R+QLLGEKVRRQESERQARLRHIAAIDSKSRA AAGA A T+ SPTARR A+ Sbjct: 35 IELQPTIMVDRDLRRADLDAAPSVTEAAHLQERCVDMATELFELKTRFDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKSFMRRVKTLEEENSKLAADNADLRLDRERLLGVVRRYKDAGRKESVAAHRDRLRKRHMSEKEVNRCDLASAKLGLKAMGQENKRLLSKAKGQASRIRELENGTEVLAKKLSELEHELECAINQKDAVQQESDKALAQEQRAKSDMEHEALLRLQAVEQASSASRXXXXXXXXXXXXEAVIETLRVKLESTVKKLEAKDSARARHQGSVVRYQKMIDSQAMALQAAREQLLGEKVRRQESERQARLRHIAAIDSKSRA-------AAGAGATSTRRPASSPTARRPAS 398 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5489.13751.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig5489.13751.1 >prot_L-elsbetiae_contig5489.13751.1 ID=prot_L-elsbetiae_contig5489.13751.1|Name=mRNA_L-elsbetiae_contig5489.13751.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp MRRVNTLEEDSSKLAEDNAELRLDRDRLLRVVRRHKEAGRADSVAAHRDRback to top mRNA from alignment at L-elsbetiae_contig5489:1968..9159+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig5489.13751.1 ID=mRNA_L-elsbetiae_contig5489.13751.1|Name=mRNA_L-elsbetiae_contig5489.13751.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7192bp|location=Sequence derived from alignment at L-elsbetiae_contig5489:1968..9159+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig5489:1968..9159+ >mRNA_L-elsbetiae_contig5489.13751.1 ID=mRNA_L-elsbetiae_contig5489.13751.1|Name=mRNA_L-elsbetiae_contig5489.13751.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig5489:1968..9159+ (Laminarionema elsbetiae ELsaHSoW15)back to top |