mRNA_L-elsbetiae_contig101.137.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: D8LMR9_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMR9_ECTSI) HSP 1 Score: 241 bits (615), Expect = 3.950e-74 Identity = 135/284 (47.54%), Postives = 178/284 (62.68%), Query Frame = 1 Query: 25 RLALVIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSF 876 +L ++ +GPPGTGKTSTILA AK+ Y DF+ MV+E+NASDDRG+DVV+G+IK F T L VKLVILDEADA+T +AQ ALR V+EK + RFC CNYVNKI LQSRCTKFRF + + ++ + ++E + VE V+ L GD RRV+NL+QS ++ Q+ + H Y + + +DM+ I LL SFKD+FD I KL KGY+L DIV L +V+ + LLDE SN E LA GGSE+L +G +V +F Sbjct: 95 KLPHLLFYGPPGTGKTSTILACAKKLYGADFKMMVLELNASDDRGIDVVRGQIKEFAGTKRLFSSGVKLVILDEADAMTNDAQFALRRVIEKYTKHTRFCMICNYVNKIIPALQSRCTKFRFAPLKPEQIQGRLQHVVDQEKVTITPDGVEAVMRLGQGDMRRVLNLLQSTHMAYQK------VDERHAYLCAAAPLKEDMEYIRNALLTASFKDAFDGILKLTTAKGYSLGDIVQELALKVME-IELPAAVMVHLLDEMSNTEERLAHGGSERLQLGSLVGAF 371
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: A0A7S2XZS5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZS5_9STRA) HSP 1 Score: 234 bits (596), Expect = 6.570e-72 Identity = 129/284 (45.42%), Postives = 179/284 (63.03%), Query Frame = 1 Query: 25 RLALVIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSF 876 RL ++ +GPPGTGKTSTILA A+ Y +F SM +E+NASDDRG+DVV+ +IK+F T L +KLVILDEADA+T++AQ ALR V+E+ + RFC CNYV+KI LQSRC +FRF + D ++ +E+ +KEG+ E +L NGD RR++NL+QS ++ +++E V+ SGS P D++ + LL SFK+S+ I L KGYAL D++S L V + LC LL E SNIEY L+ G S+KL +G +V +F Sbjct: 46 RLPHLLFYGPPGTGKTSTILACARRIYGKNFSSMTLEMNASDDRGIDVVREQIKNFASTRRLFSSGMKLVILDEADAMTSDAQFALRRVIEQYTRHTRFCMICNYVSKIIPALQSRCMRFRFGPLRSDQVQDRLNEVIDKEGVAITPEGKESILKHGNGDMRRILNLLQSTSMAYDE------VTLETVHLTSGSPLPDDVEAVLHQLLNSSFKESYQFILGLAVTKGYALADLLSELVVLV-SRVQLPPAVLCPLLSELSNIEYRLSSGASDKLQLGALVGAF 322
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: M2Y763_GALSU (Replication factor C subunit n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y763_GALSU) HSP 1 Score: 231 bits (590), Expect = 4.950e-71 Identity = 122/283 (43.11%), Postives = 184/283 (65.02%), Query Frame = 1 Query: 37 VIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKS-FKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSFHL 882 ++ +GPPGTGKTSTILA A+ Y +F+SMV+E+NASDDRG+DVV+ IK F T + VKLVILDEADA+T+ AQ ALR +MEK + RFC CNY NKI LQSRCT+FRF + + ++ +I E+EG++FE+ A+E ++ LS GD R IN++QS FLS+ + ++ VY+ +G+ S ++M++I L E+ F +D + K+ ++G+AL DI+ + R+L + + LL++ ++IE+ A GGSE L + ++ SF + Sbjct: 44 MLFYGPPGTGKTSTILACAEHMYGTNFKSMVLELNASDDRGIDVVRNEIKDFCSTQRIFATGVKLVILDEADAMTSAAQMALRRIMEKYTTSTRFCLICNYANKIIPALQSRCTRFRFGPLKEEDIRLRLGQIAEREGVVFEKDALETIIQLSQGDMRSCINILQSTFLSSGK------VTCSTVYENTGNPSNEEMEQIMDWLNEEDDFSSCYDKVKKMKAERGFALIDILRQIHKRLLTRNMSRRAKAY-LLEKLADIEHQFAFGGSELLNLCSLIGSFQI 319
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: A0A2P6NXL0_9EUKA (Replication factor C subunit 5-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NXL0_9EUKA) HSP 1 Score: 230 bits (587), Expect = 2.440e-70 Identity = 120/279 (43.01%), Postives = 180/279 (64.52%), Query Frame = 1 Query: 46 FGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSFHL 882 +GPPGTGKTSTILA+A++ Y ++ M++E+NASDDRG++VV+ +IK F T S+ +KLV+LDEADA+T AQ+ALR V+EK + RFC CNY+NK++ +QSRCT+FRF + D + ++I + EG+ E + V+ L GD R+ +N++QSA + + I E +YQ +G P D+ IF TL K FK + D I+KL KG AL DI++ L ++L ++ ++ L+D+ ++IE+ LA G SEKL +G +V +F L Sbjct: 68 YGPPGTGKTSTILAVARKLYGKNYSQMILELNASDDRGINVVRDQIKDFANTRSMFTTGLKLVVLDEADAMTQPAQAALRRVIEKYTKTTRFCLICNYLNKLTPAIQSRCTRFRFGPLMTDDVIDRVTQISKLEGVKITEAGLSAVVRLGQGDMRKCLNVLQSAHMGYDK------IDEEEIYQCTGQPLPSDIQTIFDTLFNKGFKFAVDKISKLQSTKGLALQDIITELHRKILKVEFSEEVKMI-LIDKLADIEHRLAAGTSEKLNLGALVGAFQL 339
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: A0A7S1BB71_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BB71_9STRA) HSP 1 Score: 229 bits (583), Expect = 1.000e-69 Identity = 129/295 (43.73%), Postives = 183/295 (62.03%), Query Frame = 1 Query: 25 RLALVIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFL---STQRPSTTSAISV--------EHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSF 876 RL ++ +GPPGTGKTSTI+A A++ Y + + SM +E+NASD RG+DVV+ IK F T L + K++ILDEADA+T++AQ ALR ++EK S RFC CNYV+KI LQSRCTKFRF + + E+ EKEG+ ++G V+ +L LS GD RRV+NL+QSA++ S + ++ SA SV VY +G P+D+++I LL SF D+F I K+ GY LTD++ +T V++ D L ++L+ S E+ LA G EKL +G +V F Sbjct: 47 RLPHLLFYGPPGTGKTSTIVAAARKMYGDGYGSMTLELNASDARGIDVVRNEIKEFAGTRQLFSRGTKMIILDEADAMTSDAQFALRRIIEKFSRNARFCLICNYVSKIIPALQSRCTKFRFAPLAEKLIHGRLMEVVEKEGVEIDKGGVDAILSLSGGDMRRVMNLLQSAYMNSVSISKEASDSATSVLALTTVTSRAVYMTAGHPLPEDVEKICDNLLNSSFPDAFSRIWKICTTNGYGLTDVLIDVTTAVMSMDLPDGV-LAEILEGMSECEHRLAFGTDEKLQLGGLVGVF 340
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: S0F304_CHOCR (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F304_CHOCR) HSP 1 Score: 228 bits (580), Expect = 1.400e-69 Identity = 128/289 (44.29%), Postives = 182/289 (62.98%), Query Frame = 1 Query: 1 LRYKMTLTRLALVIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIV 867 LR ++ RL ++ GPPGTGKTSTILA AKE Y + F+SMV+E+NASDDRG+ VV+ +IKSF T + VKL++LDEADA+TT AQ ALR V+EK + RFC CNYVNKI LQSRCTKFRF + D +++ EI E + +E +L L GD RR++N++QS L++ + I+ + VY +G+ P D+ + LLE++F DS + L+QDKG AL DI++ L P V + + N ++ + + S+IEY +A G EKL + ++ Sbjct: 24 LRTLISNNRLPHLLFCGPPGTGKTSTILACAKEMYGSSFKSMVLELNASDDRGIGVVRDQIKSFASTKRIFSSGVKLIVLDEADAMTTAAQMALRRVVEKYAANTRFCIICNYVNKIIPALQSRCTKFRFGPLPADDVRKRVLEIAAFESVSISSDGLEALLILGKGDMRRILNVLQSTHLASSG-ARGGEITADAVYSNTGAPHPGDVKAAWGWLLERTFPDSSAKLRTLMQDKGLALGDIITELFPLVSTSSLSKNAKMY-MFESLSDIEYRMATGSLEKLNMAALI 310
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: B7FY37_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY37_PHATC) HSP 1 Score: 228 bits (581), Expect = 1.410e-69 Identity = 123/282 (43.62%), Postives = 178/282 (63.12%), Query Frame = 1 Query: 37 VIAFGPPGTGKTSTILAMAKEYYQND--FRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSF 876 ++ +GPPGTGKTSTI+A AK Y + + SM +E+NASD RG+DVV+ IK F T L K +KL+ILDEADA+T++AQ ALR ++EK + RFC CNYV+KI LQSRCT+FRF ++RD ++ +E+ E E + ++ +L LS GD RRV+NL+QS +S + TS VY SG+ P DMD+I L+ +F+ + + I + KGYAL D+++ LT +++ + D+ L LLD SN+E+ LA G EK+ + +V F Sbjct: 53 LLLYGPPGTGKTSTIVAAAKRMYGSSSAYSSMTLELNASDARGIDVVRNEIKEFAGTKQLFNKGIKLIILDEADAMTSDAQFALRRIIEKYTKNARFCLVCNYVSKIIPALQSRCTRFRFAPLSRDQIEGRLTEVAEAEKCKTTQDGIDAILRLSGGDMRRVLNLLQSTAMSAEVVDETS------VYLTSGAPLPADMDQILDWLMNHNFQTACEQITAMCTMKGYALADVLAELTSKIMCLENLDSVPLGMLLDGMSNVEHRLAFGPDEKIQIASLVGVF 328
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: A0A6T8HB61_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8HB61_9STRA) HSP 1 Score: 228 bits (581), Expect = 3.080e-69 Identity = 127/281 (45.20%), Postives = 169/281 (60.14%), Query Frame = 1 Query: 37 VIAFGPPGTGKTSTILAMAKEYY-QNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSF 876 ++ +GPPGTGKTSTI+A AK Y N + SM +E+NASD RG+DVV+ IK F T L VKL+ILDEADA+T +AQ ALR ++EK + RFC CNYV+KI LQSRCTKFRF ++RD + + E + + V+ +L LSNGD RRV+NL+Q+ +S + + VY SGS P+DM I LL SF+ + D I+ + GYAL D+++ LT V A L DLLD S+IEY L G E+L +G +V F Sbjct: 78 LLLYGPPGTGKTSTIVAAAKRMYGDNAYTSMALELNASDTRGIDVVRNEIKEFAGTRQLFRSGVKLIILDEADAMTNDAQFALRRIIEKYTKNARFCLICNYVSKIIPALQSRCTKFRFAPLSRDQMHGRLIHVANCENVNITDNGVDAILSLSNGDMRRVLNLLQTTSMSNK----VKEVDETAVYLTSGSPLPRDMTTILDFLLNHSFRSAIDSISTMCSTNGYALCDVLTDLTTMV-CAMELPGFVLADLLDGLSDIEYRLTFGADERLQIGSLVGVF 353
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: A0A7S3UU54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UU54_HETAK) HSP 1 Score: 227 bits (579), Expect = 3.360e-69 Identity = 125/290 (43.10%), Postives = 178/290 (61.38%), Query Frame = 1 Query: 25 RLALVIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSFHLENRS 894 RL ++ +GPPGTGKTSTILA A+ Y F SMV+E+NASDDRG+DVV+ ++K F T L VKLV+LDEADA+T +AQ ALR V+EK + RFC CNYVN++ LQSRCT+FRF + + + E+EG+ E + +LDL GD RRV+NL+Q+ F++ ++ ++VY SG +DMD I++ L + K ++D I ++ KGYALTDI+ + V AA +C LL S+IE+ LA G +E+L +G + +F R+ Sbjct: 52 RLPHLLFYGPPGTGKTSTILACARRLYGKSFASMVLELNASDDRGIDVVRNQVKEFAGTRRLFSSGVKLVVLDEADAMTADAQFALRRVIEKYTRHTRFCMICNYVNRVIPALQSRCTRFRFAPLQHGQVVGRLQHVVEQEGVPLTEDGRQALLDLGQGDMRRVLNLLQATFMAYGE------VTKQNVYLTSGHPLEEDMDLIYQKLNNEDLKPTYDCILHMMSSKGYALTDILHDVGILV-AATEYPPEVMCQLLIALSDIEHRLASGATERLQLGALAGAFQAARRA 334
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Match: A0A7S2W057_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W057_9STRA) HSP 1 Score: 226 bits (575), Expect = 1.130e-68 Identity = 123/282 (43.62%), Postives = 172/282 (60.99%), Query Frame = 1 Query: 37 VIAFGPPGTGKTSTILAMAKEYYQND--FRSMVMEINASDDRGLDVVKGRIKSFVETASLSGKSVKLVILDEADALTTEAQSALRSVMEKSSVLVRFCFCCNYVNKISIPLQSRCTKFRFQGINRDSLKQMASEICEKEGLIFEEGAVEVVLDLSNGDARRVINLVQSAFLSTQRPSTTSAISVEHVYQLSGSISPKDMDRIFRTLLEKSFKDSFDDINKLVQDKGYALTDIVSGLTPRVLAAFSTDNTRLCDLLDEFSNIEYNLAGGGSEKLAVGHIVSSF 876 ++ +GPPGTGKTSTI+A AK Y + SM +E+NASD RG+D V+ +IK F T L K +KL+ILDEADA+T +AQ ALR ++EK + RFC CNYV+KI LQSRCT+FRF ++RD ++ ++ +E EG +E +L LS GD RRV+NL+QS +S + TS VY SG+ P D+D I +L F +++++ + KGYA+ DI++ LT ++ + L DLLD SNIEY LA G EK+ +V F Sbjct: 54 LLFYGPPGTGKTSTIVAAAKRMYGGSAAYSSMALELNASDARGIDTVRNQIKEFAGTRQLFNKGIKLIILDEADAMTNDAQFALRRIIEKYTKNARFCLICNYVSKIIPALQSRCTRFRFSPLSRDQIRDRLCDVARQEDCNISEGGIEAILSLSGGDMRRVLNLLQSTAMSFETIDETS------VYLTSGAPLPSDIDTITNSLFNDDFVKAYENLITMCSTKGYAMADILTDLTT-IVTTMKLPSGVLADLLDGMSNIEYRLAYGTDEKIQGASLVGVF 328 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig101.137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig101.137.1 >prot_L-elsbetiae_contig101.137.1 ID=prot_L-elsbetiae_contig101.137.1|Name=mRNA_L-elsbetiae_contig101.137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=297bp MTLTRLALVIAFGPPGTGKTSTILAMAKEYYQNDFRSMVMEINASDDRGLback to top mRNA from alignment at L-elsbetiae_contig101:13804..14706+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig101.137.1 ID=mRNA_L-elsbetiae_contig101.137.1|Name=mRNA_L-elsbetiae_contig101.137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=903bp|location=Sequence derived from alignment at L-elsbetiae_contig101:13804..14706+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig101:13804..14706+ >mRNA_L-elsbetiae_contig101.137.1 ID=mRNA_L-elsbetiae_contig101.137.1|Name=mRNA_L-elsbetiae_contig101.137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1782bp|location=Sequence derived from alignment at L-elsbetiae_contig101:13804..14706+ (Laminarionema elsbetiae ELsaHSoW15)back to top |