prot_L-elsbetiae_contig101.136.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig101.136.1
Unique Nameprot_L-elsbetiae_contig101.136.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length425
Homology
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BLAST of mRNA_L-elsbetiae_contig101.136.1 vs. uniprot
Match: Q6XM01_9PHYC (FirrV-1-B35 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM01_9PHYC)

HSP 1 Score: 207 bits (526), Expect = 1.710e-58
Identity = 145/439 (33.03%), Postives = 226/439 (51.48%), Query Frame = 0 
Query:    5 LAPPLLALIFEYHRAYQVKLLRE---VCKSFRDVLDDGGNSY-WKDMLGKYSSPLVKT--RVIYGKSVGVTALILKESFLLKTCVSCGLW-----FNTKKNRLHDILLCGRCSKKQVFRIVNLRKACTNYFLDYNVQKENHILVKLKKGRAYEVLLNHVRNVALAKYPNGDLEKRMNKRFSRLFRTELRKQKEKKKRIVDIGYKFCDILWETPSRVDKVLRDQNVLKDLVQKFGSRHDVFGDTLENRVRALRKCEVAARHLYDFGAMLTYMRKIHLLDDCYEVTSG---HRCHPRNIFRHHVNEGLHFYELSRLHADSREELLRRSSDVQIYLVQKKQR----EEGRKQLAIAMCAEDSTTYQADFFNSFILQGEGNPVFLARQQREKEYLQHNNLAWETGNFLLSGHDQENAQRLATNNVLQYTKGYPPMMRTCIIDL 425
            L  P+L  IF +H+      LRE   VCKSFR  L  G  S  W D+  +Y +       R+ +GKSVG TAL+L+ S +  TCVSCG          +K+  + + LCG C +   FR+ +L   C  +FLD     +   +  +K GRA+ +L + ++  A   YPNG L+ +M+KR  +     +RK + ++KRI D    F  ++    SR+D VL+DQ  L++ V+ F +   + GD  +N++ +     + A+   DF  +LTYM+K+ LL+   +       H  +P+ IF+ +V  GLHFY+    +A + ++L  R  DV+ ++   +QR     E R+QL ++MC E+   Y   +F  F++   GNP   AR+ R  E+L  N         +  G     A R A+  VL  T G+P M R C+IDL
Sbjct:    5 LPDPILMHIFLHHQPKDYDTLRELKHVCKSFRSAL--GTRSVVWNDLYFRYCNECAPNTGRLRWGKSVGTTALMLRLSSMTATCVSCGFQGRGFKMKPEKHPFYGVRLCGACVRLSPFRMESLTAMCQLFFLDRQHVLQGDTVTTIKIGRAFMLLFDKMKAEAERTYPNGLLKDKMDKREQKRILQSIRKIESQRKRIEDATNHFNVLVSCYSSRIDPVLQDQERLQEAVRYFSAISLLSGDFYDNKITSKTTPTLYAKKQLDFAELLTYMKKMGLLNREMQYADEDPVHAINPKYIFKIYVQNGLHFYDQVHQYAMAEQQLRARIQDVRTFINVNRQRLRSSTELRRQLCVSMCVEEGVDYCPIYFKDFVIYVVGNPCIQARRLRCFEFLTRNGHQEVVQKKISYGFSMSAAIRSASKYVLDQTNGFPVMSRACVIDL 441
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig101.136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q6XM01_9PHYC1.710e-5833.03FirrV-1-B35 n=1 Tax=Feldmannia irregularis virus a... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..425
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
IPR001810F-box domainPROSITEPS50181FBOXcoord: 1..47
score: 8.915

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig101contigL-elsbetiae_contig101:10944..12218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig101.136.1mRNA_L-elsbetiae_contig101.136.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig101 10944..12218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig101.136.1 ID=prot_L-elsbetiae_contig101.136.1|Name=mRNA_L-elsbetiae_contig101.136.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=425bp
MYAQLAPPLLALIFEYHRAYQVKLLREVCKSFRDVLDDGGNSYWKDMLGK
YSSPLVKTRVIYGKSVGVTALILKESFLLKTCVSCGLWFNTKKNRLHDIL
LCGRCSKKQVFRIVNLRKACTNYFLDYNVQKENHILVKLKKGRAYEVLLN
HVRNVALAKYPNGDLEKRMNKRFSRLFRTELRKQKEKKKRIVDIGYKFCD
ILWETPSRVDKVLRDQNVLKDLVQKFGSRHDVFGDTLENRVRALRKCEVA
ARHLYDFGAMLTYMRKIHLLDDCYEVTSGHRCHPRNIFRHHVNEGLHFYE
LSRLHADSREELLRRSSDVQIYLVQKKQREEGRKQLAIAMCAEDSTTYQA
DFFNSFILQGEGNPVFLARQQREKEYLQHNNLAWETGNFLLSGHDQENAQ
RLATNNVLQYTKGYPPMMRTCIIDL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom