prot_L-elsbetiae_contig5487.13749.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5487.13749.1
Unique Nameprot_L-elsbetiae_contig5487.13749.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length371
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5487.13749.1 vs. uniprot
Match: D7FH38_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH38_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 2.940e-134
Identity = 325/370 (87.84%), Postives = 338/370 (91.35%), Query Frame = 0 
Query:    1 FCCLQVRRGASEVQWSDWLKVPFEHACLARDMSTIRRLLEAGVNGPYDRPRDPRFRRHTLLHLSSACGNTEPGEKAYTPLHRAALGGHGEAARVLIKAGADKDARTGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESTANPNMQDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTASALLAEARADFEAITADHGSTALHVAAISGFDEVLTVLLDVGSDLESADAGGWTPLHCACAAARASCVNALIVRGADPGAITPEGHRPSSLIGTDLAEGEEPNSETNETIRKMLRIPRAESESRRRRHVAKHAGSQRPPPPYND 370
            F   QVRRGASE QW+DWLKVPFEHACLARDMSTIRRLLEAGVNGPYDRPRDPRFRRHTLLHLSSACGNTEP EKAYTPLHRA LGGH E ARVLIKAGADKDARTGGSG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ES A+PN QDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         E RAD+EA+T DHGST LHVAAISGFDEVLTVLLDVG D+ESAD+GGWTPLHCACAAARASCVN LI+RGADP AITPEG R +SLIGTDLAEG+EPNSETNETI KMLR+PRAESE+RRRR  AK+AG+QRPPPPYND
Sbjct:   48 FILTQVRRGASEQQWADWLKVPFEHACLARDMSTIRRLLEAGVNGPYDRPRDPRFRRHTLLHLSSACGNTEPSEKAYTPLHRAVLGGHSEVARVLIKAGADKDARTGGSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESLADPNAQDAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEGRADYEAVTEDHGSTPLHVAAISGFDEVLTVLLDVGCDVESADSGGWTPLHCACAAARASCVNTLIMRGADPSAITPEGKRAASLIGTDLAEGDEPNSETNETIWKMLRVPRAESEARRRRRTAKNAGNQRPPPPYND 417
[Close]
BLAST of mRNA_L-elsbetiae_contig5487.13749.1 vs. uniprot
Match: D8LKW6_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW6_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 7.400e-7
Identity = 43/115 (37.39%), Postives = 54/115 (46.96%), Query Frame = 0 
Query:    6 VRRGASEVQWSDWLKVPFEHACLARDMSTIRRLLEAGVNGP--YDRPRDPRFRRHTLLHLSSACGNTE-----------------PGEKAYTPLHRAALGGHGEAARVLIKAGAD 101
            V   A+  QWS+WL+ P EHA    D      LL+AG +G   ++   D      TLL  ++  GN E                  G+   T LHRA  GGH EAARVL+ AGAD
Sbjct:   21 VSEKAASAQWSEWLRAPLEHAVAEGDNDLALALLKAGADGSAGWEGCGD-----RTLLQAAAEGGNEEVVLTLLDNGGVEELDVVSGDNERTALHRALAGGHTEAARVLMLAGAD 130
[Close]
BLAST of mRNA_L-elsbetiae_contig5487.13749.1 vs. uniprot
Match: A0A8C5J221_JUNHY (Ankyrin repeat and SOCS box containing 10 n=2 Tax=Junco hyemalis TaxID=40217 RepID=A0A8C5J221_JUNHY)

HSP 1 Score: 58.9 bits (141), Expect = 5.250e-6
Identity = 41/100 (41.00%), Postives = 54/100 (54.00%), Query Frame = 0 
Query:  246 STALHVAAISGFDEVLTVLLDVGSDLESADAGGWTPLHCACAAARASCVNALIVRGADPGAITPEGHRPSSLIGTD-----------LAEGEEPNSETNE 334
            +T LH+ A  G+ E L +LL  G+ ++ A  GG T LH ACAAA A+C   L+  GADP A++ +GHRP  L  T            L  G   NS+T E
Sbjct:   97 TTPLHITAGRGYTECLRLLLLRGAAVDLAP-GGRTALHEACAAASAACARLLLRAGADPEAVSEQGHRPLHLCKTSRPVPHRCVQQLLQHGASVNSQTEE 195
[Close]
BLAST of mRNA_L-elsbetiae_contig5487.13749.1 vs. uniprot
Match: D7FYG4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG4_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 9.510e-5
Identity = 40/113 (35.40%), Postives = 49/113 (43.36%), Query Frame = 0 
Query:   11 SEVQWSDWLKVPFEHACLARDMSTIRRLLEAGVNGPY------DRPRDPRFRRHTLLHLSSACGNTE-----------------PGEKAYTPLHRAALGGHGEAARVLIKAGA 100
            +  QW++WL+ P EHA    D      LL AG NG        DR         TLL  ++  GN E                   ++  T LHRAA GGH  AARVL+ AGA
Sbjct:   38 TSAQWAEWLRAPLEHAVAEGDKDLALTLLNAGANGGSGWKGCNDR---------TLLQAAAEGGNEEVVRTLLDIEGMEEVDAVSSDEGGTELHRAAAGGHTNAARVLMLAGA 141
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5487.13749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FH38_ECTSI2.940e-13487.84Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D8LKW6_ECTSI7.400e-737.39Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A8C5J221_JUNHY5.250e-641.00Ankyrin repeat and SOCS box containing 10 n=2 Tax=... [more]
D7FYG4_ECTSI9.510e-535.40Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 110..125
score: 44.74
coord: 260..274
score: 25.76
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 244..273
e-value: 0.0088
score: 25.3
coord: 277..306
e-value: 0.002
score: 27.4
coord: 109..138
e-value: 6.5E-5
score: 32.3
coord: 176..205
e-value: 3.7E-4
score: 29.8
coord: 75..104
e-value: 0.032
score: 23.4
coord: 143..172
e-value: 0.0041
score: 26.3
coord: 18..48
e-value: 1500.0
score: 3.6
coord: 209..239
e-value: 0.11
score: 21.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 109..141
score: 13.117
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 75..107
score: 11.968
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 244..276
score: 12.689
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 176..208
score: 11.14
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 209..242
score: 9.431
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 277..309
score: 9.377
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 143..175
score: 12.529
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 141..241
e-value: 1.2E-27
score: 98.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 242..339
e-value: 1.7E-20
score: 74.9
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 8..140
e-value: 1.4E-21
score: 79.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 22..313
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 80..174
e-value: 5.1E-18
score: 65.5
coord: 235..305
e-value: 2.8E-9
score: 37.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 75..314
score: 69.477
NoneNo IPR availablePFAMPF13637Ank_4coord: 179..229
e-value: 2.9E-8
score: 34.1
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 108..231
coord: 22..136
coord: 183..260
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 234..309
coord: 183..260
coord: 108..231
coord: 22..136
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 234..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5487contigL-elsbetiae_contig5487:2788..11834 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5487.13749.1mRNA_L-elsbetiae_contig5487.13749.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5487 2788..11834 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5487.13749.1 ID=prot_L-elsbetiae_contig5487.13749.1|Name=mRNA_L-elsbetiae_contig5487.13749.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=371bp
FCCLQVRRGASEVQWSDWLKVPFEHACLARDMSTIRRLLEAGVNGPYDRP
RDPRFRRHTLLHLSSACGNTEPGEKAYTPLHRAALGGHGEAARVLIKAGA
DKDARTGGSGATPLHLAARKGHENCVRTLLLTGADKDGRRGLDGATPLHQ
AAFFGQMGAVRELLESTANPNMQDAEGCTPVFLAAQEGHEEVVVDLLQNG
ASPDLSREDGWSPLHAAARFGHAGTASALLAEARADFEAITADHGSTALH
VAAISGFDEVLTVLLDVGSDLESADAGGWTPLHCACAAARASCVNALIVR
GADPGAITPEGHRPSSLIGTDLAEGEEPNSETNETIRKMLRIPRAESESR
RRRHVAKHAGSQRPPPPYNDR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom